Melphalan Dose in Combination with Fludarabine Affects GI Toxicity and GVHD after Allogeneic Transplantation in Acute Myeloid Leukemia and Myelodysplastic Syndromes.

Fludarabine (Flu) and melphalan (Mel) reduced-intensity conditioning is frequently used for allogenic hematopoietic cell transplant (allo-HCT) in patients with acute myeloid leukemia (AML) and myelodysplastic syndromes (MDS). However, there is limited evidence on the impact of Mel dosing on toxicities and clinical outcomes of allo-HCT. We retrospectively compared 8/8 HLA matched donor allo-HCT outcomes of 345 patients with AML or MDS receiving total Mel dose of 100 mg/m2 (Mel-100, n=62) versus 140 mg/m2 (Mel-140, n=283) in combination with Flu. Median age at allo-HCT was 66 years and median follow-up was 36.5 months. For Mel-100 versus Mel-140 groups, any grade gastrointestinal toxicity rates were 40.3% vs. 67.8% (p<0.001), day 100 grade II-IV acute graft-versus-host disease (GVHD) rates were 21.0% vs. 43.1% (p=0.001) and 2-year chronic GVHD rates were 17.4% vs. 27.1% (p=0.033). In multivariable analysis, Mel-140 resulted in higher risks of gastrointestinal toxicity (HR=1.83, p=0.013), grade II-IV acute GVHD (HR=2.35, p=0.003), and moderate/severe chronic GVHD (HR=3.13, p=0.007). Total Mel dose had no independent impact on oral mucositis, non-relapse mortality, relapse, relapse-free survival, and overall survival. While independent validation of our observation is warranted, our findings support using Mel-100 in combination with Flu to minimize allo-HCT toxicities and morbidities related to GVHD.

Lower Weight-Based Mycophenolate Mofetil Dosing is Associated with Superior Outcomes after Haploidentical Hematopoietic Cell Transplant with Post-transplant Cyclophosphamide.

Mycophenolate mofetil (MMF) is commonly included in post-transplant cyclophosphamide (PTCy) based graft-versus-host disease (GVHD) prophylaxis after haploidentical (haplo) hematopoietic cell transplant (HCT). In the non-PTCy setting, higher MMF dose/kg has been shown to reduce rates of acute graft-versus-host disease (GVHD). When used in conjunction with PTCy, MMF is dosed at 15 mg/kg three times daily up to a maximum dose of 3 g/day. Thus, patients who weigh ≥67 kg receive 3 g/day and a variable dose/kg of MMF. We investigated the impact of MMF dose/kg on clinical outcomes following haploidentical PBSCT with PTCy-based GVHD prophylaxis. All consecutive adult patients with hematologic malignancies receiving haploidentical T cell replete peripheral blood stem cell transplant (PBSCT) with PTCy/MMF and either tacrolimus or sirolimus at the Moffitt Cancer Center or City of Hope between April 2014-August 2020 were included. For analyses, MMF dose relative to patient actual body weight (mg/kg/day), was stratified into categories of low (<29 mg/kg/day), low intermediate (29-34 mg/kg/day), high intermediate (35-41 mg/kg/day), and high (>41 mg/kg/day). Three hundred eighty-six patients were included. Of these, 54 patients received low dose, 73 low intermediate, 137 high intermediate and 122 high dose MMF by relative weight exposure. In multivariate analysis, low MMF dose exposure was associated with reduced rates of relapse in comparison to the high dose group (HR = 0.45, 95% CI: 0.21 to 0.94, P = .03). This led to superior PFS among patients with low compared to high MMF dose exposure (HR = 0.58, 95% CI: 0.34 to 0.99, P = .045). MMF relative dose exposure was not associated with engraftment, GVHD, nonrelapse mortality, or OS. In this study of patients receiving haploidentical PBSCT with PTCy based GVHD prophylaxis, low MMF dose/kg was associated with improved rates of relapse and PFS. Future prospective studies should investigate optimal dosing strategies of MMF when given with the PTCy regimen.

Inferences on the evolution of the ascorbic acid synthesis pathway in insects using Phylogenetic Tree Collapser (PTC), a tool for the automated collapsing of phylogenetic trees using taxonomic information.

When inferring the evolution of a gene/gene family, it is advisable to use all available coding sequences (CDS) from as many species genomes as possible in order to infer and date all gene duplications and losses. Nowadays, this means using hundreds or even thousands of CDSs, which makes the inferred phylogenetic trees difficult to visualize and interpret. Therefore, it is useful to have an automated way of collapsing large phylogenetic trees according to a taxonomic term decided by the user (family, class, or order, for instance), in order to highlight the minimal set of sequences that should be used to recapitulate the full history of the gene/gene family being studied at that taxonomic level, that can be refined using additional software. Here we present the Phylogenetic Tree Collapser (PTC) program (https://github.com/pegi3s/phylogenetic-tree-collapser), a flexible tool for automated tree collapsing using taxonomic information, that can be easily used by researchers without a background in informatics, since it only requires the installation of Docker, Podman or Singularity. The utility of PTC is demonstrated by addressing the evolution of the ascorbic acid synthesis pathway in insects. A Docker image is available at Docker Hub (https://hub.docker.com/r/pegi3s/phylogenetic-tree-collapser) with PTC installed and ready-to-run.

Optical diagnosis in still images of colorectal polyps: comparison between expert endoscopists and PolyDeep, a Computer-Aided Diagnosis system.

Background: PolyDeep is a computer-aided detection and classification (CADe/x) system trained to detect and classify polyps. During colonoscopy, CADe/x systems help endoscopists to predict the histology of colonic lesions. Objective: To compare the diagnostic performance of PolyDeep and expert endoscopists for the optical diagnosis of colorectal polyps on still images. Methods: PolyDeep Image Classification (PIC) is an in vitro diagnostic test study. The PIC database contains NBI images of 491 colorectal polyps with histological diagnosis. We evaluated the diagnostic performance of PolyDeep and four expert endoscopists for neoplasia (adenoma, sessile serrated lesion, traditional serrated adenoma) and adenoma characterization and compared them with the McNemar test. Receiver operating characteristic curves were constructed to assess the overall discriminatory ability, comparing the area under the curve of endoscopists and PolyDeep with the chi- square homogeneity areas test. Results: The diagnostic performance of the endoscopists and PolyDeep in the characterization of neoplasia is similar in terms of sensitivity (PolyDeep: 89.05%; E1: 91.23%, p=0.5; E2: 96.11%, p<0.001; E3: 86.65%, p=0.3; E4: 91.26% p=0.3) and specificity (PolyDeep: 35.53%; E1: 33.80%, p=0.8; E2: 34.72%, p=1; E3: 39.24%, p=0.8; E4: 46.84%, p=0.2). The overall discriminative ability also showed no statistically significant differences (PolyDeep: 0.623; E1: 0.625, p=0.8; E2: 0.654, p=0.2; E3: 0.629, p=0.9; E4: 0.690, p=0.09). In the optical diagnosis of adenomatous polyps, we found that PolyDeep had a significantly higher sensitivity and a significantly lower specificity. The overall discriminative ability of adenomatous lesions by expert endoscopists is significantly higher than PolyDeep (PolyDeep: 0.582; E1: 0.685, p < 0.001; E2: 0.677, p < 0.0001; E3: 0.658, p < 0.01; E4: 0.694, p < 0.0001). Conclusion: PolyDeep and endoscopists have similar diagnostic performance in the optical diagnosis of neoplastic lesions. However, endoscopists have a better global discriminatory ability than PolyDeep in the optical diagnosis of adenomatous polyps.

SEDA 2024 update: enhancing the SEquence DAtaset builder for seamless integration into automated data analysis pipelines.

BACKGROUND: The initial version of SEDA assists life science researchers without programming skills with the preparation of DNA and protein sequence FASTA files for multiple bioinformatics applications. However, the initial version of SEDA lacks a command-line interface for more advanced users and does not allow the creation of automated analysis pipelines. RESULTS: The present paper discusses the updates of the new SEDA release, including the addition of a complete command-line interface, new functionalities like gene annotation, a framework for automated pipelines, and improved integration in Linux environments. CONCLUSION: SEDA is an open-source Java application and can be installed using the different distributions available ( https://www.sing-group.org/seda/download.html ) as well as through a Docker image ( https://hub.docker.com/r/pegi3s/seda ). It is released under a GPL-3.0 license, and its source code is publicly accessible on GitHub ( https://github.com/sing-group/seda ). The software version at the time of submission is archived at Zenodo (version v1.6.0, http://doi.org/10.5281/zenodo.10201605 ).

Auto-phylo v2 and auto-phylo-pipeliner: building advanced, flexible, and reusable pipelines for phylogenetic inferences, estimation of variability levels and identification of positively selected amino acid sites.

The vast amount of genome sequence data that is available, and that is predicted to drastically increase in the near future, can only be efficiently dealt with by building automated pipelines. Indeed, the Earth Biogenome Project will produce high-quality reference genome sequences for all 1.8 million named living eukaryote species, providing unprecedented insight into the evolution of genes and gene families, and thus on biological issues. Here, new modules for gene annotation, further BLAST search algorithms, further multiple sequence alignment methods, the adding of reference sequences, further tree rooting methods, the estimation of rates of synonymous and nonsynonymous substitutions, and the identification of positively selected amino acid sites, have been added to auto-phylo (version 2), a recently developed software to address biological problems using phylogenetic inferences. Additionally, we present auto-phylo-pipeliner, a graphical user interface application that further facilitates the creation and running of auto-phylo pipelines. Inferences on S-RNase specificity, are critical for both cross-based breeding and for the establishment of pollination requirements. Therefore, as a test case, we develop an auto-phylo pipeline to identify amino acid sites under positive selection, that are, in principle, those determining S-RNase specificity, starting from both non-annotated Prunus genomes and sequences available in public databases.

Multiple Lines of Evidence Support 199 SARS-CoV-2 Positively Selected Amino Acid Sites.

SARS-CoV-2 amino acid variants that contribute to an increased transmissibility or to host immune system escape are likely to increase in frequency due to positive selection and may be identified using different methods, such as codeML, FEL, FUBAR, and MEME. Nevertheless, when using different methods, the results do not always agree. The sampling scheme used in different studies may partially explain the differences that are found, but there is also the possibility that some of the identified positively selected amino acid sites are false positives. This is especially important in the context of very large-scale projects where hundreds of analyses have been performed for the same protein-coding gene. To account for these issues, in this work, we have identified positively selected amino acid sites in SARS-CoV-2 and 15 other coronavirus species, using both codeML and FUBAR, and compared the location of such sites in the different species. Moreover, we also compared our results to those that are available in the COV2Var database and the frequency of the 10 most frequent variants and predicted protein location to identify those sites that are supported by multiple lines of evidence. Amino acid changes observed at these sites should always be of concern. The information reported for SARS-CoV-2 can also be used to identify variants of concern in other coronaviruses.

Efecto de la deforestación ribereña sobre la materia orgánica particulada gruesa en quebradas con influencia ganadera de la región Andina de Colombia / Effect of riparian deforestation on coarse particulate organic matter in streams with livestock influence in the Andean region of Colombia

Introducción: La materia orgánica particulada gruesa originada en la vegetación ribereña es la fuente principal de energía en muchas cuencas de cabecera. Sin embargo, la transferencia de dicha materia es alterada por la destrucción de los bosques. Objetivo: Evaluar diferencias en la materia orgánica en quebradas con bosques y con pastizales. Métodos: Comparar las entradas, el almacenamiento y la exportación de esta materia orgánica en el cauce de quebradas con bosques y con pastizales, en la región central de los Andes de Colombia. En cada quebrada, se midieron los aportes verticales y laterales de hojarasca con canastas; hojarasca del lecho de las quebradas con cuadrantes, y la exportación de material con redes de deriva, con un alcance de 100 m. Resultados: Las quebradas con bosques ribereños recibieron un promedio anual de 915 g m-2 de materia orgánica particulada gruesa, exportando un total de 334 g m-3 y almacenando 732 g m-2, valores que fueron significativamente más altos que en quebradas con pastizales, donde los valores correspondientes fueron: 125.4 g m-2; 128 g m-3 y 205.5 g m-2. Conclusiones: La remoción de cobertura boscosa de la zona ribereña reduce la materia orgánica en estas cuencas de cabecera en Colombia.

Introduction: Coarse particulate organic matter originated in riparian vegetation is the main source of energy in many headwater streams. However, the transfer of such material is altered by the destruction of forests. Objective: To assess flow differences of this organic matter in streams with forests and grasslands. Methods: We compared input, storage and export of this organic matter in the riparian belts of streams with forests, and streams with grasslands, in the central Andean region of Colombia. For each stream, we measured vertical and lateral litter with baskets; stream bed litter with a quadrant, and matter export with drift nets, in a 100 m reach. Results: The streams with riparian forest received an average of 915 g m-2 of coarse particulate organic matter annually, exported a total of 334 g m-3 and stored 732 g m-2, values that were significantly higher than in grassland streams, where the corresponding values were: 125.4 g m-2; 128 g m-3 and 205.5 g m-2. Conclusions: The removal of tree cover from the riparian zone reduced the organic matter in these headwater streams of Colombia.

Microbialite-like structures in Cladophora sp. (Ulvophyceae) mats from a subtropical Andean basin: ecological implications / Estructuras de tipo microbialito en Cladophora sp. (Ulvophyceae) de una cuenca andina subtropical: implicaciones ecológicas

Abstract The solubility equilibrium of calcite is influenced by physicochemical, climatic and biological factors. Annual cycles of exceptionally prolonged drought, in conjunction with naturally occurring diffuse organic pollution, generate the unique conditions for the precipitation of lithified carbonate structures (microbialites). The aim of this article is to analyze the possible implications of calcite precipitation produced in mats of Cladophora sp. in an Andean subtropical basin, considering it is the first time this phenomenon is described for the region. We collected samples from selected sites at the Lules River Basin, in four sampling dates between the years 2003 and 2004, within a monitoring work of 15 years. Samples were analyzed using an electron microscope and X-ray diffraction analysis. We found that Gomphonema sp. attached to Cladophora sp. contributes to precipitation of calcite and formation of microbialite like structures, in the studied area. This work presents an initial discussion of the discovery of microbialites-like structures attached to Cladophora sp. mats in a subtropical Andean stream and the environmental conditions that lead to their production, as well as the possible ecological implications of these microbialites.(AU)

Resumen La fase sólida de las sales de los cuerpos de agua juega un papel importante en la concentración de los elementos mayoritarios. El equilibrio de solubilidad de la calcita está influenciado por factores fisicoquímicos, climáticos y biológicos. Los ciclos anuales de sequía excepcionalmente prolongada, junto con la contaminación orgánica difusa de origen natural, generan condiciones únicas para la precipitación de estructuras de carbonato litificado (microbialitos). El objetivo de este artículo es analizar las posibles implicaciones de la precipitación de calcita producida en Cladophora sp. en una cuenca subtropical andina, considerando que es la primera vez que se describe este fenómeno para la región. Recolectamos muestras en sitios seleccionados en la Cuenca del Río Lules, en cuatro fechas de muestreo entre 2003 y 2004, en el marco de un trabajo de monitoreo de quince años. Usamos red Surber para realizar los muestreos. Las muestras de algas, una vez libres de macroinvertebrados, se secaron y pesaron. Analizamos utilizando microscopía electrónica y difracción de rayos X. Encontramos que Gomphonema sp. unido a Cladophora contribuye a la precipitación de calcita y la formación de estructuras similares a microbialitos, en el área estudiada. Este trabajo presenta una discusión inicial sobre el descubrimiento de estructuras similares a microbialitos unidas a filamentos de Cladophora sp. en una cuenca andina subtropical y las condiciones ambientales que conducen a su producción, así como las posibles implicaciones ecológicas de lo mencionado anteriormente.(AU)

Prácticas en enfermería para prevenir la mortalidad materna de la mujer en edad fértil / Nursing Care to Women in Fertile Age: Practices to Prevent Maternal Mortality

Introducción: En el sector salud es conocido que las enfermeras son las profesionales que mayor contacto tienen con la mujer en los momentos de atención de su vida fértil. Esta circunstancia les permite llevar a cabo diversas prácticas que buscan prevenir la muerte materna desde la preconcepción y garantizar el nacimiento seguro. Objetivo: Describir las prácticas realizadas en torno a la prevención de la mortalidad materna desde el ejercicio profesional de la enfermera, en tres instituciones de salud en Bogotá, Colombia. Métodos: Estudio cuantitativo, descriptivo transversal. El muestreo fue no probabilístico por conveniencia. Durante la recolección de la información 60 enfermeras diligenciaron un cuestionario constituido de cuatro módulos (conocimiento del sujeto de cuidado, trabajo mutidisciplinario, gestión y fundamentación normativa, y educación continuada) que fue diseñado y validado para el presente estudio. Resultados: Se identificó una correlación moderada entre el conocimiento del sujeto de cuidado y el trabajo multidisciplinario (rs=0,631, p= <0,01), el trabajo multidisciplinario y la gestión del cuidado (rs=0,648, p= <0,01), la gestión del cuidado y la educación continuada (rs=, 665, p =<0,01), y una asociación estadísticamente significativa (χ²= <0,05) entre el servicio y nivel de complejidad de la institución donde se trabaja, con respecto a la implementación de estas prácticas. Conclusiones: La ejecución de prácticas que contrarrestan la mortalidad materna es mayor cuando las enfermeras tienen un conocimiento actualizado, que las lleva a desarrollar un mejor trabajo multidisciplinario; y por ende una mayor gestión del cuidado(AU)

Introduction: Professional nurses have more contact with women during the assistance moments of their fertile life. These circumstances allow carrying on diverse practices to prevent the maternal mortality since the preconception and to guarantee a secure birth. Objective: To describe practices developed on prevention of maternal mortality from the nursing professional praxis in three health institutions in Bogotá, Colombia. Methods: It corresponds to a quantitative, descriptive, transversal design. Sixty nurses took part. We gathered information by means a questionnaire conformed in four modules (knowledge of the subject of care, multidisciplinary work, care management and normative foundation and continuing education) designed and valid for this study. Results: This study identified moderate correlation between the knowledge of the subject of care and the multidisciplinary work (rs=, 631, p=<0, 01). We also found correlation between the multidisciplinary work and the nursing care management (rs=, 648, p=<0, 01), the nursing care management and the continuing education (rs=, 665, p=<0, 01), and one meaningful statistical association (?²=<0, 05) between the service and complexity level where they work and fulfil these practices. Conclusions: The implementation of practices that counteract maternal mortality is better when nurses have updated knowledge that leads to develop better multidisciplinary work; and therefore better care management(AU)

Microbiota periodontal y microorganismos aislados de válvulas cardiacas en pacientes sometidos a cirugía de reemplazo de válvulas en una clínica de Cali, Colombia / Periodontal microbiota and microorganisms isolated from heart valves in patients undergoing valve replacement surgery in a clinic in Cali, Colombia

Resumen Introducción. La periodontitis es una enfermedad infecciosa que afecta los tejidos de soporte del diente y se asocia con diferentes enfermedades sistémicas, incluida la enfermedad cardiovascular. Los estudios microbiológicos permiten detectar microorganismos a partir de muestras subgingivales y cardiovasculares. Objetivo. Describir la microbiota periodontal cultivable y la presencia de microorganismos en válvulas cardiacas de pacientes sometidos a cirugía de reemplazo valvular en una clínica de Cali. Materiales y métodos. Se analizaron 30 muestras subgingivales y de tejidos valvulares mediante cultivo en medio bifásico, agar de sangre con suplemento y agar tripticasa de soya con antibiótico. Las muestras de las válvulas se analizaron mediante reacción en cadena de la polimerasa (PCR) convencional. Resultados. Los patógenos periodontales aislados de bolsas periodontales fueron Fusobacterium ( 50 % ), Prevotella intermedia/nigrescens (40 %), Campilobacter rectus (40 %), Eikenella corrodens (36,7 %), bacilos entéricos Gram negativos (36,7 %), Porphyromonas gingivalis (33,3 %) y Eubacterium (33,3 %). Los agentes patógenos aislados de la válvula aórtica fueron Propionibacterium acnes (12 %), bacilos entéricos Gram negativos (8 %), Bacteroides merdae (4 %) y Clostridium bifermentans (4 %), y de la válvula mitral, P. acnes y Clostridium beijerinckii. La PCR convencional no arrojó resultados positivos para agentes patógenos orales y solo se detectó ADN bacteriano en dos muestras. Conclusiones. La microbiota periodontal de pacientes sometidos a cirugía de reemplazo valvular estaba conformada por especies Gram negativas que han sido relacionadas con infecciones en tejidos extraorales; sin embargo, no se encontraron agentes patógenos periodontales en los tejidos de las válvulas. Aunque hubo muestras de estos tejidos y subgingivales, positivas para bacilos entéricos Gram negativos, no es posible asegurar que tuvieran el mismo origen filogenético.

Abstract Introduction: Periodontitis is an infectious disease that affects the support tissue of the teeth and it is associated with different systemic diseases, including cardiovascular disease. Microbiological studies facilitate the detection of microorganisms from subgingival and cardiovascular samples. Objective: To describe the cultivable periodontal microbiota and the presence of microorganisms in heart valves from patients undergoing valve replacement surgery in a clinic in Cali. Materials and methods: We analyzed 30 subgingival and valvular tissue samples by means of twophase culture medium, supplemented blood agar and trypticase soy agar with antibiotics. Conventional PCR was performed on samples of valve tissue. Results: The periodontal pathogens isolated from periodontal pockets were: Fusobacterium nucleatum (50%), Prevotella intermedia/ nigrescens (40%), Campylobacter rectus (40%), Eikenella corrodens (36.7%), Gram negative enteric bacilli (36.7%), Porphyromonas gingivalis (33.3%), and Eubacterium spp. (33.3%). The pathogens isolated from the aortic valve were Propionibacterium acnes (12%), Gram negative enteric bacilli (8%), Bacteroides merdae (4%), and Clostridium bifermentans (4%), and from the mitral valve we isolated P. acnes and Clostridium beijerinckii. Conventional PCR did not return positive results for oral pathogens and bacterial DNA was detected only in two samples. Conclusions: Periodontal microbiota of patients undergoing surgery for heart valve replacement consisted of species of Gram-negative bacteria that have been associated with infections in extraoral tissues. However, there is no evidence of the presence of periodontal pathogens in valve tissue, because even though there were valve and subgingival samples positive for Gram-negative enteric bacilli, it is not possible to maintain they corresponded to the same phylogenetic origin.

Impacto de la diabetes en la dinámica de la transmisíon de la tuberculosis en Argentina / Impact of diabetes on the transmission dynamics of tuberculosis in Argentina

La asociación de la Diabetes y la Tuberculosis si bien se conoce desde hace mucho tiempo. En las últimas décadas adquirió importancia epidemiológica a la luz de la expansión de la epidemia de diabetes mellitus tipo 2 en lugares donde la tuberculosis aún es endémica. La coexistencia diabetes y tuberculosis podría tener serias implicaciones para control de la tuberculosis en muchos países en desarrollo y puede transformarse en el próximo reto para el control mundial de la tuberculosis. En este marco, mejorar el conocimiento de la interacción entre ambas enfermedades permitirá abordar con mejores instrumentos su control. Los modelos matemáticos son herramientas que han jugado un papel clave en la formulación de estrategias de control de la tuberculosis y el establecimiento de objetivos intermedios para los programas de intervención. Este trabajo plantea un modelo que recoge los componentes principales de la dinámica de la tuberculosis y permite evaluar si la diabetes puede modificar este comportamiento, determinado un agravamiento en la situación de la tuberculosis. El modelo determinístico poblacional de la clase SEIR se calibró con datos de TB estimados por la OMS y permitió hacer proyecciones para Argentina, conformado distintos escenarios a partir de la evidencia de interacción entre ambas patologías y las medidas de intervención. Los resultados obtenidos son consistentes con la literatura internacional ya que evidencian un impacto negativo del aumento de la diabetes en la situación de la tuberculosis y su control.

The link between Diabetes and Tuberculosis has been recognized for long time. In recent decades acquired epidemiological importance in light of the expansion of the epidemic of type 2 diabetes mellitus in TB-endemic settings. The coexistence of diabetes and tuberculosis could have serious implications on TB control in many developing countries and be the next challenge for the global control of tuberculosis. In this context a better understanding of the interaction between the two diseases will allow better tools to address their control. Mathematical models are tools that have played a key role in strategies for TB control and the establishment of intermediate targets for intervention programs. This work presents a model, which includes the main components of the dynamics of tuberculosis and evaluates the dynamics for diabetes to change this behavior, worsening the situation of tuberculosis. A deterministic population-based model is proposed to analyze the impact of diabetes on the dynamics and treatment of Tuberculosis. The model calibrated with data estimated by WHO TB allowed projecting various scenarios for Argentina, generated from the evidence of interaction between the two conditions and intervention measures. The results are consistent with the international literature as evidence of a negative impact of the increase in diabetes in the situation of tuberculosis and its control.

DISEÑO DE UN SISTEMA DE REHABILITACIÓN PARA MIEMBRO SUPERIOR EN ENTORNO DE REALIDAD VIRTUAL / DESIGN OF A UPPER LIMB REHABILITATION SYSTEM IN VIRTUAL REALITY ENVIRONMENT / PROJETO DO SISTEMA DE REABILITAÇÃO DO MEMBRO SUPERIOR EM AMBIENTE DE REALIDADE VIRTUAL

Este trabajo describe el diseño y desarrollo de un sistema capaz de adquirir señales electromiográficas de superficie, digitalizarlas y procesarlas en una computadora personal, para ser usadas como control de un objeto de realidad virtual que representa al miembro superior. La clasificación de la intencionalidad del usuario se realiza mediante la configuración y entrenamiento de una red neuronal artificial. Luego se presenta en tiempo real la animación en realidad virtual de los movimientos realizados por el miembro superior. Los resultados para los cuatro voluntarios estudiados, indican una tasa de clasificación positiva en promedio del 75% para cada uno de ellos.

This work presents the design and development of a six-channel system for acquisition and conditioning of electromyographic signals collected in the upper limb. The main objective of the work is to create a system that can be used as rehabilitation and training instrument for potential users of myoelectric prostheses. The software developed perform actions of feature extraction, classifier training and design of the mechanical model of the human arm, with the running movements of flexion, extension, pronation and supination of the forearm and the grasp in a reality environment virtual, providing rehabilitation therapy to different patients.

Este trabalho apresenta a concepção e desenvolvimento de um sistema de seis canais para a aquisição e condicionamento de sinais eletromiográficos coletados no membro superior. O principal objetivo do trabalho é criar um sistema que pode ser utilizado como instrumento de reabilitação e treinamento para os potenciais utilizadores de prótese mioelétrica. O software desenvolvido executar ações de extração de características, o treinamento do classificador e design do modelo mecânico do braço humano, com os movimentos da corrida de flexão, extensão, pronação e supinação do antebraço e do alcance em um ambiente de realidade virtual, fornecendo terapia de reabilitação para diferentes pacientes.

Tuberculosis en Argentina: desigualdad social y de género / Tuberculosis in Argentina: social and gender inequality

Este artículo se propone describir la distribución de la tuberculosis en Argentina y analizar la desigualdad social y de género de la distribución en el período 1990-2011. Para ello, se emplearon las cifras oficiales de notificación de casos de tuberculosis del país, se calcularon tasas por 100.000 habitantes por jurisdicción y departamentos, por grupos de edad y por sexo. La desigualdad en la distribución se analizó mediante el índice de Gini y su asociación con las condiciones sociales mediante el índice de concentración y el índice de efecto; la tendencia se estudió mediante regresión exponencial. Los resultados muestran que las tasas de tuberculosis son mayores entre los 20 y 34 años de edad y son superiores en varones. Existe una marcada desigualdad entre jurisdicciones (índice de Gini = 0,273) y es mayor por departamentos (índice de Gini = 0,391), superior en mujeres (0,411) que en varones (0,394). La distribución de la tuberculosis se asoció a peores condiciones sociales (índice de efecto = -0,212), y esta asociación fue mayor en las mujeres (índice de efecto = 11,4; 6,4; 16,4). La tendencia del problema al descenso entre 1990 y 2011 no ha contribuido a reducir las brechas entre jurisdicciones y departamentos ni tampoco a reducir la desigualdad en la distribución de la tuberculosis asociada a las desfavorables condiciones sociales de la población.

This article seeks to describe the distribution of tuberculosis in Argentina and analyze the social and gender inequality of the distribution within the period of 1990-2011. In order to accomplish this, the official data from tuberculosis case notifications in the country was used, and the rates were calculated per 100,000 inhabitants by jurisdiction and department, by age group and by sex. The inequality in the distribution was analyzed using the Gini index and the association with social conditions using the concentration index and the effect index; the trend was studied using exponential regression. The results demonstrate that tuberculosis rates are higher between 20 and 34 years of age and are greater in males. There is a marked inequality among jurisdictions (Gini index = 0.273) which is even greater among departments (Gini index = 0.391) and is higher in females (0.411) than in males (0.394). The distribution of tuberculosis was associated with worse social conditions (effect index = -0.212) and this association was stronger in females (effect index = 11.4, 6.4, 16.4). The downward trend in tuberculosis rates observed between 1990 and 2011 has not contributed to reducing the gaps among jurisdictions and departments nor has it reduced the inequality in the distribution of tuberculosis associated with the unfavorable social conditions of the population.

Prevalencia de retinopatía diabética en comunas dependientes del Servicio de Salud Metropolitano Occidente (SSMOC) / Prevalence of diabetic retinopathy in districts of the Servicio de Salud Metropolitano Occidente (SSMOC)

La retinopatía diabética (RD) es una microangiopatía progresiva que se caracteriza por lesiones y oclusión de vasos retinales pequeños en personas con diabetes mellitus. En relación a su prevalencia en Chile, contamos con pocos trabajos descritos en la literatura, cabe mencionar que en el trabajo de Verdaguer en el año 2001 se encontró una prevalencia de 28,5 por ciento durante la campaña "Día de la diabetes". Presentamos un estudio retrospectivo de prevalencia, cuyo objetivo es determinar la prevalencia de la RD y sus tipos en la población diabética en 10 comunas del Servicio de Salud Metropolitano Occidente (SSMOC). La muestra consiste en el análisis de los resultados de fotografías retinales tomadas a 4600 pacientes diabéticos. Se encuentra una prevalencia de RD de 20 por ciento de los pacientes diabéticos estudiados, 17 por ciento tenía hallazgos compatibles con una RDNP leve a moderada y 3 por ciento presentaba características de RDNP severa y RDP.

Diabetic retinopathy (DR) is a progressive microangiopathy characterized by lesions and occlusion of small retinal vessels in people with diabetes mellitus. In relation to their prevalence in Chile, we have few studies reported in the literature, it is noteworthy that in the work of Verdaguer in 2001 found a prevalence of 28.5 percent during the "Day of diabetes". A retrospective study of prevalence, which aims to determine the prevalence of diabetic retinopathy and their rates in the diabetic population in 10 districts of the Western Metropolitan Health Service (SSMOc). The sample consists of the analysis of the results of retinal photographs taken in 4600 diabetic patients. Is a DR prevalence of 20 percent of diabetic patients studied. 17 percent had findings consistent with a mild to moderate no proliferative DR and 3 percent had features of severe no proliferative DR and proliferative DR.

Isospora araponga sp. n. (Apicomplexa: Eimeriidae), a new species of Isospora Schneider from a bare-throated bellbird, Procnias nudicollis (Vieillot, 1817) (Passeriformes: Cotingidae) from Brazil

Faecal samples from a couple of bare-throated bellbirds Procnias nudicollis imported from Brazil to Barcelona Zoo contained oocysts of Isospora araponga n. sp. Sporulated oocysts were subspherical to broadly ellipsoidal, 19.5 (17-22) I 15.5 (14-16.5) æm, shape index (length:width ratio) 1.26 (1.13-1.38) with smooth and colourless bilayered wall, about 1 æm thick, and with varying number (1-3) of polar granule, but without a micropyle or residuum. The sporocysts were ellipsoidal, slightly asymmetric, 12.5 (12-13) I 8.5 (7.5-9) æm with barely visible Stieda body and indistinguishable substieda body. Sporozoites were elongated, possessing smooth surface and two distinct refractile bodies.

Cuadros tóxicos producidos por mordeduras de araña en Chile: latrodectismo y loxoscelismo / Toxic pictures produced by spider bites in Chile: latrodectism and loxoscelism

Latrodectism, produced by the bite of Latrodectus spiders, is worldwide distributed, occurs in hot seasons, and affects mostly men when carrying out agricultural activities. The main symptoms are muscular pain and tremors, profuse perspiration, increased lacrimal, nasal and salival secretions, and hypertension. Symptoms last one week. Neostigmine is a very efficient drug in the treatment of this condition. Loxoscelism, caused by the bite of Loxosceles spiders, is worldwide distributed, affects individuals of all ages. It may present two clinical forms: cutaneous loxoscelism (CL) and viscerocutaneous loxoscelism (VCL). Both forms have been registered in all seasons, with a higher incidence in hot periods, and in bedrooms, when the person is sleeping or dressing. The cutaneous surface of limbs and face are most frequently affected. Local clinical manifestations are pain, edema and livedoid plaque, most of which evolve into a necrotic scar in CL, whereas hematuria, hemoglobinuria, jaundice, fever and sensorial involvement characterize VCL. If visceral involvement does not appear within 24 hours, it is probable that the diagnosis corresponds to CL, with a good prognosis. If a VCL patient survives 48 hours, the possibilities of recovery are high. The patients are successfully treated with parenteral antihistamines or corticosteroids in CL and corticosteroids in VCL

Malaria en Chile: 1913-2001 / Malaria in Chile from 1913 to 2001

Background: Malaria was restricted to the I Region of Chile, being Anopheles pseudopunctipennis the only vector species. In 1936 the parasitosis affected more than 50 percent of the population and 62.4 percent of military recruits, proceeding from Southern regions became infected. From 1937 to 1947, an antimalaria campaign was carried out, stressing actions on the battle against the vector and the treatment of malaria infected individuals. Since April 1945 no autochthonous cases of malaria have been detected. Aim: To update the situation of malaria in Chile. Methods: 1) Imported malaria: Analysis of occasional publications on the subject (1945-1988) and the annual reports of the Ministry of Health Department of Epidemiology (1990-2001). Annual reports on the Anopheles specimens collected -mostly larvae- in the provinces of Arica and Iquique and examined in the Parasitology Unit of the School of Medicine, University of Chile, during the period 1980-2001. Results: 1) Imported malaria. A total of 24 cases were published in the period 1945-1988. In the 1980-2001 period, the Ministry of Health recorded 66 cases with 5 (8.8 percent) deaths. 2) Anophelines: Only in 1984, 1985, 1998 and 2001 A. pseudopunctipennis foci were detected. Entomological surveillance was stressed and insecticides were applied on these focuses. Conclusions: Autochthonous malaria does not exist in Chile since 1945. The detection of malaria cases in countries where the parasitosis was eradicated, can be the result of tourism or migrations. In Chile, the Environmental Programs of Arica and Iquique perform periodical surveys in localities where mosquitoes exist. When A. pseudopunctipennis is found, the entomological vigilance is stressed and insecticide applications are reiterated until the situation is controlled (AU)

Malaria en Chile: 1913-2001 / Malaria in Chile from 1913 to 2001

Background: Malaria was restricted to the I Region of Chile, being Anopheles pseudopunctipennis the only vector species. In 1936 the parasitosis affected more than 50 percent of the population and 62.4 percent of military recruits, proceeding from Southern regions became infected. From 1937 to 1947, an antimalaria campaign was carried out, stressing actions on the battle against the vector and the treatment of malaria infected individuals. Since April 1945 no autochthonous cases of malaria have been detected. Aim: To update the situation of malaria in Chile. Methods: 1) Imported malaria: Analysis of occasional publications on the subject (1945-1988) and the annual reports of the Ministry of Health Department of Epidemiology (1990-2001). Annual reports on the Anopheles specimens collected -mostly larvae- in the provinces of Arica and Iquique and examined in the Parasitology Unit of the School of Medicine, University of Chile, during the period 1980-2001. Results: 1) Imported malaria. A total of 24 cases were published in the period 1945-1988. In the 1980-2001 period, the Ministry of Health recorded 66 cases with 5 (8.8 percent) deaths. 2) Anophelines: Only in 1984, 1985, 1998 and 2001 A. pseudopunctipennis foci were detected. Entomological surveillance was stressed and insecticides were applied on these focuses. Conclusions: Autochthonous malaria does not exist in Chile since 1945. The detection of malaria cases in countries where the parasitosis was eradicated, can be the result of tourism or migrations. In Chile, the Environmental Programs of Arica and Iquique perform periodical surveys in localities where mosquitoes exist. When A. pseudopunctipennis is found, the entomological vigilance is stressed and insecticide applications are reiterated until the situation is controlled