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1.
J Appl Microbiol ; 131(5): 2178-2192, 2021 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-33905584

RESUMO

Greywater, the wastewater from sinks, showers and laundry, is an understudied environment for bacterial communities. Most greywater studies focus on quantifying pathogens, often via proxies used in other wastewater, like faecal indicator bacteria; there is a need to identify more greywater-appropriate surrogates, like Staphylococcus sp. Sequencing-based studies have revealed distinct communities in different types of greywater as well as in different parts of greywater infrastructure, including biofilms on pipes, holding tanks and filtration systems. The use of metagenomic sequencing provides high resolution on both the taxa and genes present, which may be of interest in cases like identifying pathogens and surrogates relevant to different matrices, monitoring antibiotic resistance genes and understanding metabolic processes occurring in the system. Here, we review what is known about bacterial communities in different types of greywater and its infrastructure. We suggest that wider adoption of environmental sequencing in greywater research is important because it can describe the entire bacterial community along with its metabolic capabilities, including pathways for removal of nutrients and organic materials. We briefly describe a metagenomic dataset comparing different types of greywater samples in a college dormitory building to highlight the type of questions these methods can address. Metagenomic sequencing can help further the understanding of greywater treatment for reuse because it allows for identification of new pathogens or genes of concern.


Assuntos
Eliminação de Resíduos Líquidos , Águas Residuárias , Bactérias/genética , Filtração , Humanos , Staphylococcus
2.
J Appl Microbiol ; 119(1): 289-301, 2015 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-25898905

RESUMO

AIMS: Development of efficacious grey water (GW) treatment systems would benefit from detailed knowledge of the bacterial composition of GW. Thus, the aim of this study was to characterize the bacterial composition from (i) various points throughout a GW recycling system that collects shower and sink handwash (SH) water into an equalization tank (ET) prior to treatment and (ii) laundry (LA) water effluent of a commercial-scale washer. METHODS AND RESULTS: Bacterial composition was analysed by high-throughput pyrosequencing of the 16S rRNA gene. LA was dominated by skin-associated bacteria, with Corynebacterium, Staphylococcus, Micrococcus, Propionibacterium and Lactobacillus collectively accounting for nearly 50% of the total sequences. SH contained a more evenly distributed community than LA, with some overlap (e.g. Propionibacterium), but also contained distinct genera common to wastewater infrastructure (e.g. Zoogloea). The ET contained many of these same wastewater infrastructure-associated bacteria, but was dominated by genera adapted for anaerobic conditions. CONCLUSIONS: The data indicate that a relatively consistent set of skin-associated genera are the dominant human-associated bacteria in GW, but infrastructure-associated bacteria from the GW collection system and ET used for transient storage will be the most common bacteria entering GW treatment and reuse systems. SIGNIFICANCE AND IMPACT OF THE STUDY: This study is the first to use high-throughput sequencing to identify the bacterial composition of various GW sources.


Assuntos
Bactérias/isolamento & purificação , Águas Residuárias/microbiologia , Bactérias/classificação , Bactérias/genética , Humanos , Dados de Sequência Molecular , Filogenia , Pele/microbiologia , Purificação da Água/instrumentação , Abastecimento de Água
3.
J Microbiol Methods ; 96: 62-7, 2014 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-24211532

RESUMO

Community level physiological profiling is a simple, high-throughput technique for assessing microbial community physiology. Initial methods relying on redox-dye based detection of respiration were subject to strong enrichment bias, but subsequent development of a microtiter assay using an oxygen-quenched dye reduced this bias and improved the versatility of the approach. Commercial production of the oxygen microplates recently stopped, which led to the present effort to develop and validate a system using a luminophore dye (platinum tetrakis pentafluorophenyl) immobilized at the bottom of wells within a 96 well microtiter plate. The technique was used to analyze three well-characterized Florida soils: oak saw palmetto scrub, coastal mixed hardwood, and soil from an agricultural field used to grow corn silage. Substrate induced respiration was monitored by measuring respiration rates in soils under basal conditions and comparing to soils supplemented with nitrogen and various carbon sources (mannose, casein, asparagine, coumaric acid). All data was compared to a previously available commercial assay. There were no significant differences in the maximum peak intensity or the time to peak response for all soils tested (p<0.001, α=0.05). The experimental assay plates can be reused on soils up to four times (based on a deviation of less than 5%), where the commercial assay should not be reused. The results indicate that the new oxygen-based bioassay is a cost effective, open source tool for functional profiling of microbial communities.


Assuntos
Bioensaio/métodos , Técnicas Microbiológicas/métodos , Microbiota/fisiologia , Oxigênio/metabolismo , Microbiologia do Solo , Carbono/metabolismo , Florida , Nitrogênio/metabolismo
4.
Microb Ecol ; 52(4): 725-37, 2006 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-17075733

RESUMO

Microorganisms will be an integral part of biologically based waste processing systems used for water purification or nutrient recycling on long-term space missions planned by the National Aeronautics and Space Administration. In this study, the function and stability of microbial inocula of different diversities were evaluated after inoculation into plant-based waste processing systems. The microbial inocula were from a constructed community of plant rhizosphere-associated bacteria and a complexity gradient of communities derived from industrial wastewater treatment plant-activated sludge. Community stability and community function were defined as the ability of the community to resist invasion by a competitor (Pseudomonas fluorescens 5RL) and the ability to degrade surfactant, respectively. Carbon source utilization was evaluated by measuring surfactant degradation and through Biolog and BD oxygen biosensor community level physiological profiling. Community profiles were obtained from a 16S-23S rDNA intergenic spacer region array. A wastewater treatment plant-derived community with the greatest species richness was the least susceptible to invasion and was able to degrade surfactant to a greater extent than the other complexity gradient communities. All communities resisted invasion by a competitor to a greater extent than the plant rhizosphere isolate constructed community. However, the constructed community degraded surfactant to a greater extent than any of the other communities and utilized the same number of carbon sources as many of the other communities. These results demonstrate that community function (carbon source utilization) and community stability (resistance to invasion) are a function of the structural composition of the community irrespective of species richness or functional richness.


Assuntos
Bactérias/crescimento & desenvolvimento , Plantas/microbiologia , Esgotos/microbiologia , Eliminação de Resíduos Líquidos/métodos , Bactérias/genética , Biodiversidade , DNA Ribossômico/genética , Microbiologia Ambiental , RNA Ribossômico 16S/genética , RNA Ribossômico 23S/genética
5.
J Appl Microbiol ; 100(3): 488-99, 2006 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-16478488

RESUMO

AIM: To incorporate into the lambda phage genome, a luxI-based acyl-homoserine lactone (AHL) synthase genetic construct and exploit the autoamplified power of quorum sensing to translate a phage infection event into a chemical signature detectable by a lux-based bioluminescent bioreporter, with focus towards facile detection of microbial pathogens. METHODS AND RESULTS: The luxI gene from Vibrio fischeri was inserted into the lambda phage genome to construct a model phage-based biosensor system for the general detection of Escherichia coli. The AHL signalling molecules synthesized upon phage infection are detected by an AHL-specific bioluminescent bioreporter based on the luxCDABE gene cassette of V. fischeri. The assay generates target-specific visible light signals with no requisite addition of extraneous substrate. This binary reporter system was able to autonomously respond to lambda phage infection events at target E. coli concentrations ranging from 1 x 10(8) to 1 CFU ml(-1) within 1.5-10.3 h, respectively, in pure culture. When assayed against artificially contaminated lettuce leaf washings, detection within an E. coli inoculum range from 1 x 10(8) to 130 CFU ml(-1) was achieved within 2.6-22.4 h, respectively. CONCLUSIONS: The initial feasibility of binary phage-based reporter assays indicates that quorum sensing can be used to translate a phage infection event into an autoamplified chemical signature. SIGNIFICANCE AND IMPACT OF STUDY: With further modification, binary phage-based reporter assays may be capable of rapidly and cost effectively detecting pathogenic agents at very low population densities.


Assuntos
4-Butirolactona/análogos & derivados , Aliivibrio fischeri/genética , Proteínas de Bactérias/genética , Bacteriófago lambda/genética , Escherichia coli/genética , Fatores de Transcrição/genética , 4-Butirolactona/genética , Contagem de Colônia Microbiana/métodos , Meios de Cultura , Relação Dose-Resposta a Droga , Escherichia coli/virologia , Proteínas de Escherichia coli/genética , Microbiologia de Alimentos , Lactuca/microbiologia , Substâncias Luminescentes , Proteínas Luminescentes , Transdução de Sinais/genética , Especificidade da Espécie
6.
Microb Ecol ; 49(2): 257-64, 2005 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-15965723

RESUMO

Ecological theory suggests that microbial communities with greater microbial diversity would be less susceptible to invasion by potential opportunistic pathogens. We investigated whether the survival of the opportunistic pathogen Pseudomonas aeruginosa in the wheat rhizosphere would be affected by the presence of natural and constructed microbial communities of various diversity levels. Three levels of microbial community diversity were derived from wheat roots by a dilution/extinction approach. These wheat rhizosphere inocula, as well as a gnotobiotic microbial community consisting of seven culturable wheat rhizobacterial isolates, were introduced into the nutrient solution of hydroponically grown wheat plants on the day of planting. Phenotypic characterization of the culturable microbial communities on R2A medium, Shannon microbial diversity index, community-level physiological profiles, and terminal restriction fragment length polymorphisms were used to assess the varying microbial diversity levels. At day 7 the roots were invaded with P. aeruginosa and the number of P. aeruginosa colony forming units per root were measured at day 14. The average number of surviving P. aeruginosa cells was 3.52, 4.90, 7.18, 6.65 log(10) cfu/root in the high, medium, low, and gnotobiotic microbial community diversity level treatments, respectively. The invasibility of the rhizosphere communities by P. aeruginosa was inversely related to the level of diversity from the dilution extinction gradient. The gnotobiotic community did not confer protection against P. aeruginosa invasion. Although these data indicate that invasibility is inversely related to diversity, further study is needed to both reproduce these findings and define the specific mechanisms of the diversity effect.


Assuntos
Biodiversidade , Raízes de Plantas/microbiologia , Pseudomonas aeruginosa/fisiologia , Microbiologia do Solo , Triticum/microbiologia
7.
Water Res ; 38(8): 1952-62, 2004 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-15087176

RESUMO

Anionic (sodium laureth sulfate, SLES), amphoteric (cocamidopropyl betaine, CAPB) and nonionic (alcohol polyethoxylate, AE) surfactants were added to separate nutrient film technique (NFT) hydroponic systems containing dwarf wheat (Triticum aestivum cv. USU Apogee) in a series of 21 day trials. Surfactant was added either in a (1). temporally dynamic mode (1-3 g surfactant m(-2) growing area d(-1)) as effected by automatic addition of a 300 ppm surfactant solution to meet plant water demand, or (2). continuous mode (2 g surfactant m(-2) growing area d(-1)) as effected by slow addition (10 mLh(-1)) of a 2000 ppm surfactant solution beginning at 4d after planting. SLES showed rapid primary degradation in both experiments, with no accumulation 24 h after initial addition. CAPB and AE were degraded less rapidly, with 30-50% remaining 24 h after initial addition, but CAPB and AE levels were below detection limit for the remainder of the study. No reductions in vegetative growth of wheat were observed in response to SLES, but biomass was reduced 20-25% with CAPB and AE. Microbial communities associated with both the plant roots and wetted hardware surfaces actively degraded the surfactants, as determined by monitoring surfactant levels following pulse additions at day 20 (with plants) and day 21 (after plant removal). In order to test whether the biofilm communities could ameliorate phytotoxicity by providing a microbial community acclimated for CAPB and AE decay, the continuous exposure systems were planted with wheat seeds after crop removal at day 21. Acclimation resulted in faster primary degradation (>90% within 24h) and reduced phytotoxicity. Overall, the studies indicate that relatively small areas (3-5m(2)) of hydroponic plant systems can process per capita production of mixed surfactants (5-10 g x person(-1)d(-1)) with minimal effects on plant growth.


Assuntos
Hidroponia , Desenvolvimento Vegetal , Tensoativos/química , Biofilmes/crescimento & desenvolvimento , Conservação dos Recursos Naturais , Sistemas Ecológicos Fechados , Monitoramento Ambiental , Necessidades Nutricionais , Plantas/microbiologia , Rhizobium/citologia , Rhizobium/metabolismo , Tensoativos/análise , Tensoativos/metabolismo , Fatores de Tempo , Triticum/crescimento & desenvolvimento , Triticum/microbiologia , Água
8.
Microb Ecol ; 47(2): 137-49, 2004 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-14994179

RESUMO

Extension of human habitation into space requires that humans carry with them many of the microorganisms with which they coexist on Earth. The ubiquity of microorganisms in close association with all living things and biogeochemical processes on Earth predicates that they must also play a critical role in maintaining the viability of human life in space. Even though bacterial populations exist as locally adapted ecotypes, the abundance of individuals in microbial species is so large that dispersal is unlikely to be limited by geographical barriers on Earth (i.e., for most environments "everything is everywhere" given enough time). This will not be true for microbial communities in space where local species richness will be relatively low because of sterilization protocols prior to launch and physical barriers between Earth and spacecraft after launch. Although community diversity will be sufficient to sustain ecosystem function at the onset, richness and evenness may decline over time such that biological systems either lose functional potential (e.g., bioreactors may fail to reduce BOD or nitrogen load) or become susceptible to invasion by human-associated microorganisms (pathogens) over time. Research at the John F. Kennedy Space Center has evaluated fundamental properties of microbial diversity and community assembly in prototype bioregenerative systems for NASA Advanced Life Support. Successional trends related to increased niche specialization, including an apparent increase in the proportion of nonculturable types of organisms, have been consistently observed. In addition, the stability of the microbial communities, as defined by their resistance to invasion by human-associated microorganisms, has been correlated to their diversity. Overall, these results reflect the significant challenges ahead for the assembly of stable, functional communities using gnotobiotic approaches, and the need to better define the basic biological principles that define ecosystem processes in the space environment.


Assuntos
Ecossistema , Ambiente Controlado , Meio Ambiente Extraterreno , Sistemas de Manutenção da Vida , Astronave , Bactérias/genética , Biodiversidade , Evolução Biológica , Meio Ambiente , Fungos/genética , Modelos Genéticos , Análise de Componente Principal
9.
Microb Ecol ; 48(3): 375-88, 2004 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-15692858

RESUMO

Microbial communities in the sediment and associated with the dominant type of standing dead plant were collected from the high marsh zones of 10 sites along the eastern coast of the United States from Maine to Florida. Microbial community composition was examined using T-RFLP, and bacterial and fungal abundance was determined microscopically. Within the sediment, community composition was strongly correlated with latitude, indicating that biogeographical factors are important determinants of sediment community composition, whereas abundance was positively and strongly correlated with sediment organic matter content. A strong biogeographical effect was observed for both bacterial and fungal abundance on standing dead plants, but there was no clear relationship between community composition and latitude. Microbial community composition was more similar among plants of the same type (i.e., related plant species) suggesting that plant type (i.e., substrate quality) is primarily responsible for the determining community composition on standing dead plants.


Assuntos
Microbiologia Ambiental , Sedimentos Geológicos/microbiologia , Plantas/microbiologia , Bactérias , Ecossistema , Fungos , Geografia , Polimorfismo de Fragmento de Restrição , Água do Mar , Especificidade da Espécie , Estados Unidos
10.
Adv Space Res ; 34(7): 1470-6, 2004.
Artigo em Inglês | MEDLINE | ID: mdl-15846874

RESUMO

Solid-waste treatment in space for Advanced Life Support, ALS, applications requires that the material can be safely processed and stored in a confined environment. Many solid-wastes are not stable because they are wet (40-90% moisture) and contain levels of soluble organic compounds that can contribute to the growth of undesirable microorganisms with concomitant production of noxious odors. In the absence of integrated Advanced Life Support systems on orbit, permanent gas, trace volatile organic and microbiological analyses were performed on crew refuse returned from the volume F "wet" trash of three consecutive Shuttle missions (STS-105, 109, and 110). These analyses were designed to characterize the short-term biological stability of the material and assess potential crew risks resulting from microbial decay processes during storage. Waste samples were collected post-orbiter landing and sorted into packaging material, food waste, toilet waste, and bulk liquid fractions deposited during flight in the volume F container. Aerobic and anaerobic microbial loads were determined in each fraction by cultivation on R2A and by acridine orange direct count (AODC). Dry and ash weights were performed to determine both water and organic content of the materials. Experiments to determine the aerobic and anaerobic biostability of refuse stored for varying periods of time were performed by on-line monitoring of CO2 and laboratory analysis for production of hydrogen sulfide and methane. Volatile organic compounds and permanent gases were analyzed using EPA Method TO15 by USEPA et al. [EPA Method TO15, The Determination of Volatile Organic Compounds (VOCs) in Ambient Air using SUMMA, Passivated Canister Sampling and Gas Chromatographic Analysis,1999] with gas chromatography/mass spectrometry and by gas chromatography with selective detectors. These baseline measures of waste stream content, labile organics, and microbial load in the volume F Shuttle trash provide data for waste subsystem analysis and atmospheric management within the ALS Project.


Assuntos
Gases/análise , Esgotos/microbiologia , Voo Espacial , Gerenciamento de Resíduos/métodos , Ausência de Peso , Aerobiose , Anaerobiose , Dióxido de Carbono/análise , Microbiologia Ambiental , Etilenos/análise , Sulfeto de Hidrogênio/análise , Metano/análise , Oxigênio/análise , Resíduos/análise
11.
J Ind Microbiol Biotechnol ; 30(11): 636-42, 2003 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-14586805

RESUMO

A bioluminescent bioreporter for the detection of the microbial volatile organic compound p-cymene was constructed as a model sensor for the detection of metabolic by-products indicative of microbial growth. The bioreporter, designated Pseudomonas putida UT93, contains a Vibrio fischeri luxCDABE gene fused to a p-cymene/p-cumate-inducible promoter derived from the P. putida F1 cym operon. Exposure of strain UT93 to 0.02-850 ppm p-cymene produced self-generated bioluminescence in less than 1.5 h. Signals in response to specific volatile organic compounds (VOCs) such as m- and p-xylene and styrene, also occurred, but at two-fold lower bioluminescent levels. The bioreporter was interfaced with an integrated-circuit microluminometer to create a miniaturized hybrid sensor for remote monitoring of p-cymene signatures. This bioluminescent bioreporter integrated-circuit device was capable of detecting fungal presence within approximately 3.5 h of initial exposure to a culture of p-cymene-producing Penicillium roqueforti.


Assuntos
Biotecnologia/métodos , Proteínas Luminescentes/genética , Monoterpenos/metabolismo , Pseudomonas putida/genética , Síndrome do Edifício Doente/microbiologia , Microbiologia do Ar , Cimenos , Monitoramento Ambiental/métodos , Genes Reporter , Penicillium/crescimento & desenvolvimento , Penicillium/metabolismo , Pseudomonas putida/metabolismo , Estireno/metabolismo , Vibrio/genética , Xilenos/metabolismo
12.
Adv Space Res ; 31(1): 249-53, 2003.
Artigo em Inglês | MEDLINE | ID: mdl-12580190

RESUMO

The degradation of an anionic surfactant (Igepon TC-42) was investigated as part of an integrated study of direct recycling of human hygiene water through hydroponic plant growth systems. Several chemical approaches were developed to characterize the degradation of Igepon and to measure the accumulation of intermediates such as fatty acids and methyl taurine. Igepon was rapidly degraded as indicated by the reduction of methylene blue active substances (MBAS) and component fatty acids. The Igepon degradation rate continued to increase over a period of several weeks following repeated daily exposure to 18 micrograms/l Igepon. The accumulation of free fatty acids and methyl taurine was also observed during decomposition of Igepon. The concentration of methyl taurine was below detection limit (0.2 nmol/ml) during the slow phase of Igepon degradation, and increased to 1-2 nmol/ml during the phase of rapid degradation. These findings support a degradation pathway involving initial hydrolysis of amide to release fatty acids and methyl taurine, and subsequent degradation of these intermediates.


Assuntos
Sistemas Ecológicos Fechados , Hidroponia , Sistemas de Manutenção da Vida , Tensoativos/metabolismo , Taurina/análogos & derivados , Eliminação de Resíduos Líquidos , Biodegradação Ambiental , Meios de Cultura/análise , Ácidos Graxos/análise , Humanos , Azul de Metileno/análise , Glycine max , Tensoativos/química , Triticum , Gerenciamento de Resíduos/métodos , Microbiologia da Água
13.
Bioresour Technol ; 84(2): 119-27, 2002 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-12139328

RESUMO

Bioreactor retention time is a key process variable that will influence costs that are relevant to long distance space travel or long duration space habitation. However. little is known about the effects of this parameter on the microbiological treatment options that are being proposed for Advanced Life Support (ALS) systems. Two bioreactor studies were designed to examine this variable. In the first one, six retention times ranging from 1.3 to 21.3 days--were run in duplicate, 81 working-volume continuous stirred tank reactors (CSTR) that were fed ALS wheat residues. Ash-free dry weight loss, carbon mineralization, soluble TOC reduction, changes in fiber content (cellulose, hemicellulose, and lignin), bacterial numbers, and mineral recoveries were monitored. At short retention times--1.33 days--biodegradation was poor (total: 16-20%, cellulose - 12%, hemicellulose - 28%) but soluble TOC was decreased by 75-80% and recovery of major crop inorganic nutrients was adequate, except for phosphorus. A high proportion of the total bacteria (ca. 83%) was actively respiring. At the longest retention time tested, 21.3 days, biodegradation was good (total: 55-60%, cellulose ca. 70%, hemicellulose - ca. 55%) and soluble TOC was decreased by 80%. Recovery of major nutrients, except phosphorus, remained adequate. A very low proportion of total bacteria was actively respiring (ca. 16%). The second bioreactor study used potato residue to determine if even shorter retention times could be used (range 0.25-2.0 days). Although overall biodegradation deteriorated, the degradation of soluble TOC continued to be ca. 75%. We conclude that if the goal of ALS bioprocessing is maximal degradation of crop residues, including cellulose, then retention times of 10 days or longer will be needed. If the goal is to provide inorganic nutrients with the smallest volume/weight bioreactor possible, then a retention time of 1 day (or less) is sufficient.


Assuntos
Reatores Biológicos , Produtos Agrícolas , Voo Espacial , Aerobiose , Reprodutibilidade dos Testes
14.
Microb Ecol ; 42(2): 150-8, 2001 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-11680502

RESUMO

Successional theory predicts that opportunistic species with high investment of energy in reproduction and wide niche width will be replaced by equilibrium species with relatively higher investment of energy in maintenance and narrower niche width as communities develop. Since the ability to rapidly grow into a detectable colony on nonselective agar medium could be considered as characteristic of opportunistic types of bacteria, the percentage of culturable cells may be an indicator of successional state in microbial communities. The ratios of culturable cells (colony forming units on R2A agar) to total cells (acridine orange direct microscopic counts) and culturable cells to active cells (reduction of 5-cyano-2,3-ditolyl tetrazolium chloride) were measured over time in two types of laboratory microcosms (the rhizosphere of hydroponically grown wheat and aerobic, continuously stirred tank reactors containing plant biomass) to determine the effectiveness of culturabilty as an index of successional state. The culturable cell:total cell ratio in the rhizosphere decreased from approximately 0.25 to less than 0.05 during the first 30-50 days of plant growth, and from 0.65 to 0.14 during the first 7 days of operation of the bioreactor. The culturable cell:active cell ratio followed similar trends, but the values were consistently greater than the culturable cell:total cell ratio, and even exceeded I in early samples. Follow-up studies used a cultivation-independent method, terminal restriction fragment length polymorphisms (TRFLP) from whole community DNA, to assess community structure. The number of TRFLP peaks increased with time, while the number of culturable types did not, indicating that the general decrease in culturability is associated with a shift in community structure. The ratio of respired to assimilated C-14-labeled amino acids increased with the age of rhizosphere communities, supporting the hypothesis that a shift in resource allocation from growth to maintenance occurs with time. Results from this work indicate that the percentage of culturable cells may be a useful method for assessing the successional state of microbial communities.


Assuntos
Ecossistema , Ambiente Controlado , Raízes de Plantas/microbiologia , Triticum/microbiologia , Microbiologia da Água , Aminoácidos/farmacocinética , Bactérias/crescimento & desenvolvimento , Bactérias/metabolismo , Biomassa , Reatores Biológicos , Contagem de Colônia Microbiana , Ecologia , Hidroponia , Raízes de Plantas/crescimento & desenvolvimento , Raízes de Plantas/metabolismo , Fatores de Tempo , Triticum/crescimento & desenvolvimento , Triticum/metabolismo
15.
Appl Environ Microbiol ; 67(2): 702-12, 2001 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-11157234

RESUMO

A series of microcosm experiments was performed using serial dilutions of a sewage microbial community to inoculate a set of batch cultures in sterile sewage. After inoculation, the dilution-defined communities were allowed to regrow for several days and a number of community attributes were measured in the regrown assemblages. Based upon a set of numerical simulations, community structure was expected to differ along the dilution gradient; the greatest differences in structure were anticipated between the undiluted-low-dilution communities and the communities regrown from the very dilute (more than 10(-4)) inocula. Furthermore, some differences were expected among the lower-dilution treatments (e.g., between undiluted and 10(-1)) depending upon the evenness of the original community. In general, each of the procedures used to examine the experimental community structures separated the communities into at least two, often three, distinct groups. The groupings were consistent with the simulated dilution of a mixture of organisms with a very uneven distribution. Significant differences in community structure were detected with genetic (amplified fragment length polymorphism and terminal restriction fragment length polymorphism), physiological (community level physiological profiling), and culture-based (colony morphology on R2A agar) measurements. Along with differences in community structure, differences in community size (acridine orange direct counting), composition (ratio of sewage medium counts to R2A counts, monitoring of each colony morphology across the treatments), and metabolic redundancy (i.e., generalist versus specialist) were also observed, suggesting that the differences in structure and diversity of communities maintained in the same environment can be manifested as differences in community organization and function.


Assuntos
Bactérias/crescimento & desenvolvimento , Ecossistema , Modelos Biológicos , Esgotos/microbiologia , Bactérias/genética , Carbono/metabolismo , Contagem de Colônia Microbiana , Meios de Cultura , Polimorfismo de Fragmento de Restrição
16.
Soil Biol Biochem ; 33(7-8): 1059-66, 2001 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-12194184

RESUMO

The relative effectiveness of average-well-color-development-normalized single-point absorbance readings (AWCD) vs the kinetic parameters mu(m), lambda, A, and integral (AREA) of the modified Gompertz equation fit to the color development curve resulting from reduction of a redox sensitive dye from microbial respiration of 95 separate sole carbon sources in microplate wells was compared for a dilution series of rhizosphere samples from hydroponically grown wheat and potato ranging in inoculum densities of 1 x 10(4)-4 x 10(6) cells ml-1. Patterns generated with each parameter were analyzed using principal component analysis (PCA) and discriminant function analysis (DFA) to test relative resolving power. Samples of equivalent cell density (undiluted samples) were correctly classified by rhizosphere type for all parameters based on DFA analysis of the first five PC scores. Analysis of undiluted and 1:4 diluted samples resulted in misclassification of at least two of the wheat samples for all parameters except the AWCD normalized (0.50 abs. units) data, and analysis of undiluted, 1:4, and 1:16 diluted samples resulted in misclassification for all parameter types. Ordination of samples along the first principal component (PC) was correlated to inoculum density in analyses performed on all of the kinetic parameters, but no such influence was seen for AWCD-derived results. The carbon sources responsible for classification differed among the variable types with the exception of AREA and A, which were strongly correlated. These results indicate that the use of kinetic parameters for pattern analysis in CLPP may provide some additional information, but only if the influence of inoculum density is carefully considered.


Assuntos
Técnicas Microbiológicas , Raízes de Plantas/microbiologia , Microbiologia do Solo , Carbono , Contagem de Colônia Microbiana , Cor , Ecossistema , Estudos de Avaliação como Assunto , Solanum tuberosum/microbiologia , Triticum/microbiologia
17.
J Chromatogr A ; 874(2): 207-15, 2000 Apr 07.
Artigo em Inglês | MEDLINE | ID: mdl-10817359

RESUMO

A direct approach utilizing ion pairing reversed-phase chromatography coupled with suppressed conductivity detection was developed to monitor biodegradation of anionic surfactants during wastewater recycling through hydroponic plant growth systems and fixed-film bioreactors. Samples of hydroponic nutrient solution and bioreactor effluent with high concentrations (up to 120 mS electrical conductance) of inorganic ions can be analyzed without pretreatment or interference. The presence of non-ionic surfactants did not significantly affect the analysis. Dynamic linear ranges for tested surfactants [Igepon TC-42, ammonium lauryl sulfate, sodium laureth sulfate and sodium alkyl (C10-C16) ether sulfate] were 2 to approximately 500, 1 to approximately 500, 2.5 to approximately 550 and 3.0 to approximately 630 microg/ml, respectively.


Assuntos
Cromatografia por Troca Iônica/métodos , Tensoativos/análise , Purificação da Água , Ânions/análise , Condutividade Elétrica , Monitoramento Ambiental
18.
Life Support Biosph Sci ; 7(2): 209-18, 2000.
Artigo em Inglês | MEDLINE | ID: mdl-11543559

RESUMO

Invasion of plant-based life support systems by plant pathogens could cause plant disease and disruption of life support capability. Root rot caused by the fungus, Pythium, was observed during tests of prototype plant growth systems containing wheat at the Kennedy Space Center (KSC). We conducted experiments to determine if the presence of complex microbial communities in the plant root zone (rhizosphere) resisted invasion by the Pythium species isolated from the wheat root. Rhizosphere inocula of different complexity (as assayed by community-level physiological profile: CLPP) were developed using a dilution/extinction approach, followed by growth in hydroponic rhizosphere. Pythium growth on wheat roots and concomitant decreases in plant growth were inversely related to the complexity of the inocula during 20-day experiments in static hydroponic systems. Pythium was found on the seeds of several different wheat cultivars used in controlled environmental studies, but it is unclear if the seed-borne fungal strain(s) were identical to the pathogenic strain recovered from the KSC studies. Attempts to control pathogens and their effects in hydroponic life support systems should include early inoculation with complex microbial communities, which is consistent with ecological theory.


Assuntos
Sistemas Ecológicos Fechados , Microbiologia Ambiental , Hidroponia , Pythium/microbiologia , Triticum/microbiologia , Sistemas de Manutenção da Vida , Doenças das Plantas , Raízes de Plantas/microbiologia , Pythium/patogenicidade , Sementes/microbiologia , Microbiologia do Solo
19.
Acad Med ; 74(1 Suppl): S136-40, 1999 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-9934324

RESUMO

Locum tenens programs were independently developed by the University of New Mexico Health Sciences Center and East Carolina University School of Medicine to address health care needs within their states. The programs represent distinct models to provide locum tenens services for practices in rural and medically underserved regions through collaboration with stage government representatives and agencies. Differences between programs include years of operation, days of coverage provided, types of learners and providers involved, sources of funding, costs of the programs, and extent of institutional support. Common beneficial outcomes of the programs include coverage for struggling practices, training in rural medicine for locum tenens providers, recruitment of physicians to rural practice sites, and improved relationships with program partners. Adequate funding and institutional support are essential for success of locum tenens programs.


Assuntos
Área Carente de Assistência Médica , Modelos Organizacionais , Faculdades de Medicina , Escolha da Profissão , Governo , Humanos , New Mexico , North Carolina , Desenvolvimento de Programas , Avaliação de Programas e Projetos de Saúde , População Rural
20.
Life Support Biosph Sci ; 6(2): 141-52, 1999.
Artigo em Inglês | MEDLINE | ID: mdl-11542241

RESUMO

Direct recycling of gray water (human hygiene water) through plant production systems would reduce the need for additional space, mass, and energy for water reclamation in Advanced Life Support (ALS) systems. A plant production system designed to produce 25% of crew food needs could theoretically purify enough water through transpiration for 100% of crew water requirements. This scenario was tested through additions of shower and laundry water to recirculating hydroponic systems containing either wheat or soybean. Surfactant (Igepon TC-42) did not accumulate in the systems, and both the rate of surfactant disappearance and the proportion of Igepon-degrading microorganisms on the plant roots increased with time. A mechanism of surfactant degradation via the microbially ally mediated hydrolysis of the amide linkage and subsequent breakdown of fatty acid components is proposed. Fecal coliforms present in the human gray water were not detectable on the plant roots, indicating that human-associated microorganisms do not grow in the system. Overall plant growth was unaffected by gray water additions, although preliminary evidence suggests that reproduction may be inhibited.


Assuntos
Sistemas Ecológicos Fechados , Glycine max/crescimento & desenvolvimento , Hidroponia , Triticum/crescimento & desenvolvimento , Eliminação de Resíduos Líquidos , Gerenciamento de Resíduos , Microbiologia da Água , Biomassa , Conservação dos Recursos Naturais , Escherichia coli , Humanos , Sistemas de Manutenção da Vida/instrumentação , Raízes de Plantas/crescimento & desenvolvimento , Raízes de Plantas/microbiologia , Sódio , Tensoativos , Fatores de Tempo
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