Signals of Potential Species Associations Offer Clues about Community Organisation of Stream Fish across Seasons.

Environmental filtering, spatial factors and species interactions are fundamental ecological mechanisms for community organisation, yet the role of such interactions across different environmental and spatial settings remains mostly unknown. In this study, we investigated fish community organisation scenarios and seasonal species-to-species associations potentially reflecting biotic associations along the Qiupu River (China). Based on a latent variable approach and a tree-based method, we compared the relative contribution of the abiotic environment, spatial covariates and potential species associations for variation in the community structure, and assessed whether different assembly scenarios were modulated by concomitant changes in the interaction network structure of fish communities across seasons. We found that potential species associations might have been underestimated in community-based assessments of stream fish. Omnivore species, since they have more associations with other species, were found to be key components sustaining fish interaction networks across different stream orders. Hence, we suggest that species interactions, such as predation and competition, likely played a key role in community structure. For instance, indices accounting for network structure, such as connectance and nestedness, were strongly correlated with the unexplained residuals from our latent variable approach, thereby re-emphasising that biotic signals, potentially reflecting species interactions, may be of primary importance in determining stream fish communities across seasons. Overall, our findings indicate that interaction network structures are a powerful tool to reflect the contribution of potential species associations to community assembly. From an applied perspective, this study should encourage freshwater ecologists to empirically capture and manage biotic constraints in stream ecosystems across different geographical and environmental settings, especially in the context of the ever-increasing impacts of human-induced local extinction debts and species invasions.

A new Gammarus species from Xinjiang Uygur Autonomous Region (China) with a key to Xinjiang freshwater gammarids (Crustacea, Amphipoda, Gammaridae).

A new species of the genus Gammarus Fabricius, 1775 is described and illustrated from Xinjiang Uygur Autonomous Region, China. Gammaruszhouqiongi sp. nov. is characterized by pereopods III-IV with long straight setae on posterior margins; inner ramus of uropod III more than twice as long as peduncle, reaching 0.7 times the length of outer ramus; inner ramus with plumose setae, and outer ramus with both plumose setae and long simple setae. Detailed morphological comparisons with related species are discussed. The K2P distances for each marker (CO1, 16S, 28S, and EF1α) of the new species differ from those of other Gammarus species in Xinjiang. Both phylogenetic trees based on separate (CO1, 16S, 28S, and EF1α) and combined (CO1+16S+28S+EF1α) markers show that the new species is an independent branch. A key to identify Gammarus species in Xinjiang is provided.

The efficacy of DNA barcoding in the classification, genetic differentiation, and biodiversity assessment of benthic macroinvertebrates.

Macroinvertebrates have been recognized as key ecological indicators of aquatic environment and are the most commonly used approaches for water quality assessment. However, species identification of macroinvertebrates (especially of aquatic insects) proves to be very difficult due to the lack of taxonomic expertise in some regions and can become time-consuming. In this study, we evaluated the feasibility of DNA barcoding for the classification of benthic macroinvertebrates and investigated the genetic differentiation in seven orders (Insecta: Ephemeroptera, Plecoptera, Trichoptera, Diptera, Hemiptera, Coleoptera, and Odonata) from four large transboundary rivers of northwest China and further explored its potential application to biodiversity assessment. A total of 1,144 COI sequences, belonging to 176 species, 112 genera, and 53 families were obtained and analyzed. The barcoding gap analysis showed that COI gene fragment yielded significant intra- and interspecific divergences and obvious barcoding gaps. NJ phylogenetic trees showed that all species group into monophyletic species clusters whether from the same population or not, except two species (Polypedilum. laetum and Polypedilum. bullum). The distance-based (ABGD) and tree-based (PTP and MPTP) methods were utilized for grouping specimens into Operational Taxonomic Units (OTUs) and delimiting species. The ABGD, PTP, and MPTP analysis were divided into 177 (p = .0599), 197, and 195 OTUs, respectively. The BIN analysis generated 186 different BINs. Overall, our study showed that DNA barcoding offers an effective framework for macroinvertebrate species identification and sheds new light on the biodiversity assessment of local macroinvertebrates. Also, the construction of DNA barcode reference library of benthic macroinvertebrates in Eurasian transboundary rivers provides a solid backup for bioassessment studies of freshwater habitats using modern high-throughput technologies in the near future.

Effects of different types of land-use on taxonomic and functional diversity of benthic macroinvertebrates in a subtropical river network.

Expansion of agricultural and urban areas and intensification of catchment land-use increasingly affect different facets of biodiversity in aquatic communities. However, understanding the responses of taxonomic and functional diversity to specific conversion from natural forest to agriculture and urban land-use remains limited, especially in subtropical streams where biomonitoring programs and using functional traits are still under development. Here, we conducted research in a subtropical stream network to examine the responses of macroinvertebrate taxonomic and functional diversity to different types of land-use in central China. Our results showed that medium body size, univoltine, gill respiration, and slow seasonal development were much higher in natural forest sites, while certain traits related to strong resilience and resistance (e.g., small body size, fast seasonal development, bi-or multivoltine, abundant occurrence in drift, sprawler) dominated in high-intensity agriculture and urbanization sites. We further found that land-use compromised water quality (e.g., increases in total phosphate, conductivity and water temperature) and habitat conditions (e.g., high proportion of sand and silt, gravel, and channel width) accounted for the changes in trait composition based on a combination of RLQ and fourth-corner analysis. Moreover, natural forest sites presented relatively high values of functional richness than other land-use, demonstrating the importance of natural forest maintenance to promote high levels of functional diversity. However, taxonomic diversity indexes showed higher sensitivity to distinguish different types of land-use compared to functional diversity measures. Even so, given that certain trait categories showed significant relationships with specific local environmental stressors, trait-based approaches can provide reliable evidence to diagnose the cause of impairment and complement the results of the taxonomic-based approaches. Our findings support the idea that taxonomic and functional approaches should be integrated in river restoration and land-use management.

Integration of α, ß and γ components of macroinvertebrate taxonomic and functional diversity to measure of impacts of commercial sand dredging.

Effects of commercial sand mining on aquatic diversity are of increasing global concern, especially in parts of some developing countries. However, understanding of this activity on the diversity of macroinvertebrates remains focused on the α component of species diversity, rather than community functioning. Thus, there remains much uncertainty regarding how each component of taxonomic (TD) and functional (FD) diversity respond to the activity both in freshwater and marine environments. Here, we assessed the effect of sand dredging on α, ß and γ components of TD and FD during different dredging periods based on the response of macroinvertebrate communities over 4 years in the second largest freshwater lake in China. After three years of active dredging, substantial reductions in each component (α, ß and γ) of TD and FD were observed within the dredged area. Moreover, after one year of natural recovery, a distinct restoration was observed with an obvious return in multiple facets of TD and FD indices. No such changes were observed within the adjacent and reference areas. Decreases in the multiple components of TD and FD within the dredged area were most likely associated with the direct extraction of substrate and associated benthic fauna and indirect variations of the water and sediment environment (e.g., increases in water depth and decreases in %Clay). Furthermore, dispersal processes and mass effects mainly contributed to the maintenance of TD and FD during the dredged and recovery stages. In addition, the fast recovery of TD and FD was also related to the simple taxonomic structure and highly connected nature of the study area. Our results suggest that a more precise experimental design (BACI) should be pursued to avoid potentially confounding effects (e.g., natural disturbance) because the sensitivity of diversity indices depends upon different experimental designs. Moreover, measurement of the impacts of sand dredging on macroinvertebrate diversity can be undertaken within a rigorous framework for better understanding the patterns and processes of each component of TD and FD under the sand dredging disturbance.

Degraded functional structure of macroinvertebrates caused by commercial sand dredging practices in a flood plain lake.

In parts of developing countries, the over-exploitation of sands from inland waters has led to serious environmental concerns. However, understanding of the impacts of commercial sand dredging on inland water ecosystem functions remains limited. Herein, we assess the effects of this activity on the functional structure of the macroinvertebrate community and its recovery processes based on a 4-year survey, in the South Dongting Lake in China. Our result showed a simplified macroinvertebrate functional structures within the dredged area, as evidenced by a loss of certain trait categories (e.g., oval and conical body form) and a significant reduction in trait values due to the direct removal of macroinvertebrates and indirect alternations to physical environmental conditions (e.g., water depth and %Medium sand). Moreover, clear increases were observed in certain trait categories (e.g., small body size and swimmer) resulting from the dredging-related disturbance (e.g., increased turbidity) within the adjacent area. Furthermore, one year after the cessation of dredging, a marked recovery in the taxonomic and functional structure of macroinvertebrate assemblages was observed with most lost trait categories returning and an increase in the trait values of eight categories (e.g., body size 1.00-3.00 cm and oval body form) within the dredged and adjacent area. In addition, dispersal processes and sediment composition were the main driver for the structuring of the macroinvertebrate taxonomic and functional assemblages during the dredging stages, whilst water environmental conditions dominated the taxonomic structure and dispersal processes determined the functional structure during the recovery stage. Implications of our results for monitoring and management of this activity in inland waters are discussed.