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1.
Biomolecules ; 14(5)2024 May 06.
Artigo em Inglês | MEDLINE | ID: mdl-38785967

RESUMO

Mucositis is a pathological condition characterised by inflammation and ulceration of the mucous membranes lining the alimentary canal, particularly in the mouth (oral mucositis) and the gastrointestinal tract. It is a common side effect of cancer treatments, including chemotherapy and radiotherapy, and it is sometimes responsible for treatment interruptions. Preventing mucositis throughout the alimentary tract is therefore crucial. However, current interventions mainly target either oral or gastrointestinal side effects. This review aimed to investigate the use of systemically administered anti-inflammatory agents to prevent mucositis in cancer patients undergoing cancer treatment. PubMed, Ovid, Scopus, Web of Science, WHO ICTRP and ClinicalTrials.gov were screened to identify eligible randomised controlled trials (RCTs). The published literature on anti-inflammatory agents provides mixed evidence regarding the degree of efficacy in preventing/reducing the severity of mucositis in most anticancer treatments; however, sample size continued to be a significant limitation, alongside others discussed. Our review yielded a list of several anti-inflammatory agents that exhibit potential mucositis-preventive effects in cancer patients undergoing cancer treatment, which can be used to inform clinical practice.


Assuntos
Anti-Inflamatórios , Quimiorradioterapia , Mucosite , Ensaios Clínicos Controlados Aleatórios como Assunto , Humanos , Anti-Inflamatórios/uso terapêutico , Quimiorradioterapia/efeitos adversos , Mucosite/prevenção & controle , Mucosite/induzido quimicamente , Mucosite/etiologia , Neoplasias/tratamento farmacológico , Estomatite/prevenção & controle , Estomatite/etiologia , Estomatite/tratamento farmacológico
2.
PLoS One ; 19(1): e0287773, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-38236920

RESUMO

Surface dielectric barrier discharge (SDBD) has wide applications in flow control, wastewater treatment, and biomedicine. The dielectric surface of an SDBD actuator is generally attached to the water droplets during applications. Thus far, only a few studies have been conducted on the effects of water covering the dielectric surface on the discharge characteristics of SDBD. Therefore, the effects of water droplets on the discharge of an SDBD actuator based on a repetitive microsecond pulse power supply were investigated in this study. The results show that a filament micro-discharge channel forms between the light and dark regions at the internal edge of the SDBD high-voltage electrode and develops toward the center of the dielectric surface in the region without water droplet coverage. SDBD in the water-covered region was divided into two stages. This paper compares the electrical characteristics of SDBD with and without water droplet, and explores the electric field distortion effect of water droplet endpoints through 3D simulation.Based on the theories of water droplet polarization and gas discharge, the effects of water droplets on plasma development and surface charge accumulation under water-covered condition were analyzed. The water droplet plays a similar role as a "secondary electrode" during the discharge process.


Assuntos
Eletricidade , Simulação por Computador , Eletrodos
3.
Int J Mol Sci ; 24(17)2023 Aug 31.
Artigo em Inglês | MEDLINE | ID: mdl-37686321

RESUMO

Bendamustine (BENDA) is a bifunctional alkylating agent with alkylating and purinergic antitumor activity, which exerts its anticancer effects by direct binding to DNA, but the detailed mechanism of BENDA-DNA interaction is poorly understood. In this paper, the interaction properties of the anticancer drug BENDA with calf thymus DNA (ctDNA) were systematically investigated based on surface-enhanced Raman spectroscopy (SERS) technique mainly using a novel homemade AuNPs/ZnCl2/NpAA (NpAA: nano porous anodic alumina) solid-state substrate and combined with ultraviolet-visible spectroscopy and molecular docking simulation to reveal the mechanism of their interactions. We experimentally compared and studied the SERS spectra of ctDNA, BENDA, and BENDA-ctDNA complexes with different molar concentrations (1:1, 2:1, 3:1), and summarized their important characteristic peak positions, their peak position differences, and hyperchromic/hypochromic effects. The results showed that the binding modes include covalent binding and hydrogen bonding, and the binding site of BENDA to DNA molecules is mainly the N7 atom of G base. The results of this study help to understand and elucidate the mechanism of BENDA at the single-molecule level, and provide guidance for the further development of effective new drugs with low toxicity and side effects.


Assuntos
Ouro , Nanopartículas Metálicas , Cloridrato de Bendamustina , Simulação de Acoplamento Molecular , Análise Espectral Raman , DNA
4.
Nat Commun ; 13(1): 5361, 2022 09 12.
Artigo em Inglês | MEDLINE | ID: mdl-36097016

RESUMO

DNA data storage is a rapidly developing technology with great potential due to its high density, long-term durability, and low maintenance cost. The major technical challenges include various errors, such as strand breaks, rearrangements, and indels that frequently arise during DNA synthesis, amplification, sequencing, and preservation. In this study, a de novo strand assembly algorithm (DBGPS) is developed using de Bruijn graph and greedy path search to meet these challenges. DBGPS shows substantial advantages in handling DNA breaks, rearrangements, and indels. The robustness of DBGPS is demonstrated by accelerated aging, multiple independent data retrievals, deep error-prone PCR, and large-scale simulations. Remarkably, 6.8 MB of data is accurately recovered from a severely corrupted sample that has been treated at 70 °C for 70 days. With DBGPS, we are able to achieve a logical density of 1.30 bits/cycle and a physical density of 295 PB/g.


Assuntos
Sequenciamento de Nucleotídeos em Larga Escala , Armazenamento e Recuperação da Informação , Algoritmos , DNA/genética , Análise de Sequência de DNA
5.
Artif Life ; 28(3): 369-395, 2022 08 04.
Artigo em Inglês | MEDLINE | ID: mdl-35881679

RESUMO

Connecting brain and behavior is a longstanding issue in the areas of behavioral science, artificial intelligence, and neurobiology. As is standard among models of artificial and biological neural networks, an analogue of the fully mature brain is presented as a blank slate. However, this does not consider the realities of biological development and developmental learning. Our purpose is to model the development of an artificial organism that exhibits complex behaviors. We introduce three alternate approaches to demonstrate how developmental embodied agents can be implemented. The resulting developmental Braitenberg vehicles (dBVs) will generate behaviors ranging from stimulus responses to group behavior that resembles collective motion. We will situate this work in the domain of artificial brain networks along with broader themes such as embodied cognition, feedback, and emergence. Our perspective is exemplified by three software instantiations that demonstrate how a BV-genetic algorithm hybrid model, a multisensory Hebbian learning model, and multi-agent approaches can be used to approach BV development. We introduce use cases such as optimized spatial cognition (vehicle-genetic algorithm hybrid model), hinges connecting behavioral and neural models (multisensory Hebbian learning model), and cumulative classification (multi-agent approaches). In conclusion, we consider future applications of the developmental neurosimulation approach.


Assuntos
Inteligência Artificial , Cognição , Algoritmos , Cognição/fisiologia , Aprendizagem , Software
6.
Front Comput Neurosci ; 15: 739515, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-34630061

RESUMO

Grid cells are crucial in path integration and representation of the external world. The spikes of grid cells spatially form clusters called grid fields, which encode important information about allocentric positions. To decode the information, studying the spatial structures of grid fields is a key task for both experimenters and theorists. Experiments reveal that grid fields form hexagonal lattice during planar navigation, and are anisotropic beyond planar navigation. During volumetric navigation, they lose global order but possess local order. How grid cells form different field structures behind these different navigation modes remains an open theoretical question. However, to date, few models connect to the latest discoveries and explain the formation of various grid field structures. To fill in this gap, we propose an interpretive plane-dependent model of three-dimensional (3D) grid cells for representing both two-dimensional (2D) and 3D space. The model first evaluates motion with respect to planes, such as the planes animals stand on and the tangent planes of the motion manifold. Projection of the motion onto the planes leads to anisotropy, and error in the perception of planes degrades grid field regularity. A training-free recurrent neural network (RNN) then maps the processed motion information to grid fields. We verify that our model can generate regular and anisotropic grid fields, as well as grid fields with merely local order; our model is also compatible with mode switching. Furthermore, simulations predict that the degradation of grid field regularity is inversely proportional to the interval between two consecutive perceptions of planes. In conclusion, our model is one of the few pioneers that address grid field structures in a general case. Compared to the other pioneer models, our theory argues that the anisotropy and loss of global order result from the uncertain perception of planes rather than insufficient training.

7.
Front Bioeng Biotechnol ; 9: 689797, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-34239862

RESUMO

Over the past decades, remarkable progress on phosphoramidite chemistry-based large-scale de novo oligonucleotide synthesis has been achieved, enabling numerous novel and exciting applications. Among them, de novo genome synthesis and DNA data storage are striking. However, to make these two applications more practical, the synthesis length, speed, cost, and throughput require vast improvements, which is a challenge to be met by the phosphoramidite chemistry. Harnessing the power of enzymes, the recently emerged enzymatic methods provide a competitive route to overcome this challenge. In this review, we first summarize the status of large-scale oligonucleotide synthesis technologies including the basic methodology and large-scale synthesis approaches, with special focus on the emerging enzymatic methods. Afterward, we discuss the opportunities and challenges of large-scale oligonucleotide synthesis on de novo genome synthesis and DNA data storage respectively.

8.
Oncotarget ; 8(61): 102801-102819, 2017 Nov 28.
Artigo em Inglês | MEDLINE | ID: mdl-29262525

RESUMO

Cyclooxygenase-2 (COX-2) has been found to be induced during the early stage of Alzheimer's disease (AD). Using mouse-derived astrocyte and APP/PS1 transgenic (Tg) mice as model systems, we firstly elucidated the mechanisms underlying COX-2 metabolic production including prostaglandin (PG)E2- and PGI2-mediated tumor necrosis factor α (TNF-α) regulation. Specifically, PGE2 accumulation in astrocyte activated the p38 and JNK/c-Jun signaling pathways via phosphorylation, resulting in TNF-α expression. In contrast, the administration of PGI2 attenuated the effects of PGE2 in stimulating the production of TNF-α by inhibiting the activity of TNF-α promoter and the binding activity of AP1 on the promoter of TNF-α. Moreover, our data also showed that not only Aß1-42 oligomers but also Aß1-42 fibrils have the ability to involve in mediating the antagonistic effects of PGE2 and PGI2 on regulating the expression of TNF-α via a p38- and JNK/c-Jun-dependent, AP1-transactivating mechanism. Reciprocally, the production of TNF-α finally accelerated the deposition of ß-amyloid protein (Aß)1-42 in ß-amyloid plaques (APs), which contribute to the cognitive decline of AD.

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