A supermatrix phylogeny of the world's bees (Hymenoptera: Anthophila).

The increasing availability of large molecular phylogenies has provided new opportunities to study the evolution of species traits, their origins and diversification, and biogeography; yet there are limited attempts to synthesise existing phylogenetic information for major insect groups. Bees (Hymenoptera: Anthophila) are a large group of insect pollinators that have a worldwide distribution, and a wide variation in ecology, morphology, and life-history traits, including sociality. For these reasons, as well as their major economic importance as pollinators, numerous molecular phylogenetic studies of family and genus-level relationships have been published, providing an opportunity to assemble a bee 'tree-of-life'. We used publicly available genetic sequence data, including phylogenomic data, reconciled to a taxonomic database, to produce a concatenated supermatrix phylogeny for the Anthophila comprising 4,586 bee species, representing 23% of species and 82% of genera. At family, subfamily, and tribe levels, support for expected relationships was robust, but between and within some genera relationships remain uncertain. Within families, sampling of genera ranged from 67 to 100% but species coverage was lower (17-41%). Our phylogeny mostly reproduces the relationships found in recent phylogenomic studies with a few exceptions. We provide a summary of these differences and the current state of molecular data available and its gaps. We discuss the advantages and limitations of this bee supermatrix phylogeny (available online at beetreeoflife.org), which may enable new insights into long standing questions about evolutionary drivers in bees, and potentially insects more generally.

Dazzled by shine: gloss as an antipredator strategy in fast moving prey.

Previous studies on stationary prey have found mixed results for the role of a glossy appearance in predator avoidance-some have found that glossiness can act as warning coloration or improve camouflage, whereas others detected no survival benefit. An alternative untested hypothesis is that glossiness could provide protection in the form of dynamic dazzle. Fast moving animals that are glossy produce flashes of light that increase in frequency at higher speeds, which could make it harder for predators to track and accurately locate prey. We tested this hypothesis by presenting praying mantids with glossy or matte targets moving at slow and fast speed. Mantids were less likely to strike glossy targets, independently of speed. Additionally, mantids were less likely to track glossy targets and more likely to hit the target with one out of the two legs that struck rather than both raptorial legs, but only when targets were moving fast. These results support the hypothesis that a glossy appearance may have a function as an antipredator strategy by reducing the ability of predators to track and accurately target fast moving prey.

Updating the knowledge of the flower flies (Diptera: Syrphidae) from Chile: Illustrated catalog, extinction risk and biological notes.

Syrphidae, more commonly known as flower flies, are considered one of the most important Diptera families worldwide because of their critical role in pollination, biological control and decomposition of organic matter. The study of these flies in Chile has stagnated due to a lack of local experts as well as the absence of an updated catalog of species. This study is an attempt to remedy the latter of these issues by providing an illustrated and updated catalog to the Syrphidae of Chile. Species are presented under currently accepted names, with synonyms and previous combinations listed and original references. Type localities, world and Chilean distribution by geopolitical Chilean regions, taxonomic and biological notes, a complete record of bibliographic references and extinction risk under IUCN Red List criteria are provided. This catalog recognizes 132 species of Syrphidae, belonging to four subfamilies (Eristalinae, Microdontinae, Pipizinae and Syrphinae), 13 tribes and 47 genera. A total of 46 species (34.84 %) is restricted to the geopolitical territory of Chile. Eight species are considered exotic, one is considered incertae sedis and three are based on doubtful records. Seventeen species of 10 different genera (Copestylum Macquart, 1846; Dolichogyna Macquart, 1842; Eosalpingogaster Hull, 1949b; Eupeodes Osten Sacken, 1877; Meromacrus Rondani, 1848; Palpada Macquart, 1834; Paragus Latreille, 1804; Sphiximorpha Rondani, 1850; Sterphus Philippi, 1865 and Toxomerus Macquart, 1855) are reported from Chile for the first time. A total of 44 species (33.33 %) reported from Chile are directly threatened by human activities such as agriculture, forestry, mining and/or urbanization and indirectly by climate change. The gaps found in the geographic distribution of Chilean flower fly species and what it means for its use by disciplines such as ecology, floral biology and agronomy, are discussed. In addition, the use of this illustrated catalog for biological conservation, the potential definition of priority areas and ecosystem management plans based on this group of Diptera are also discussed.

Native bees of high Andes of Central Chile (Hymenoptera: Apoidea): biodiversity, phenology and the description of a new species of Xeromelissa Cockerell (Hymenoptera: Colletidae: Xeromelissinae).

High-altitude ecosystems are found in mountain chains and plateaus worldwide. These areas tend to be underrepresented in insect biodiversity assessments because of the challenges related to systematic survey at these elevations, such as extreme climatic and geographic conditions. Nonetheless, high-altitude ecosystems are of paramount importance because they have been seen to be species pumps for other geographic areas, such as adjacent locations, functioning as buffers for population declines. Moreover, these ecosystems and their biodiversity have been proposed to be fast-responding indicators of the impacts caused by global climate change. Bees have been highlighted among the insect groups that have been affected by these problems. This work used bees as a proxy to demonstrate and reinforce the importance of systematic surveys of high-altitude ecosystems. Here, field collections were undertaken and an updated review was conducted for the native bee biodiversity of the high-altitude ecosystem found at the Andes system of central Chile, including the phenological trends of these insects during the flowering season. Of the 58 species that have been described for this location, we were able to confirm the occurrence of 46 of these species as a result of our sampling. In addition, thanks to these recent collections, a new species of Xeromelissa Cockerell is described in the present work. These findings highlight the need for further high-altitude insect surveys of this biome, which include both temporal and spatial complexity in their design, to allow for accurate assessment of bee species diversity and compositional changes in these mountain regions.

Along urbanization sprawl, exotic plants distort native bee (Hymenoptera: Apoidea) assemblages in high elevation Andes ecosystem.

Native bees contribute a considerable portion of pollination services for endemic as well as introduced plant species. Their decline has been attributed to several human-derived influences including global warming as well as the reduction, alteration, and loss of bees' habitat. With human expansion comes along the introduction of exotic plant species with negative impacts over native ecosystems. Anthropic effects may even have a deeper impact on communities adapted to extreme environments, such as high elevation habitats, where abiotic stressors alone are a natural limitation to biodiversity. Among these effects, the introduction of exotic plants and urbanization may have a greater influence on native communities. In this work, we explored such problems, studying the relationship between the landscape and its effect over richness and abundance of native bees from the subandean belt in the Andes mountain chain. Furthermore, we investigated the effects of exotic plant abundance on this high-altitude bee assemblage. Despite the landscape not showing an effect over bee richness and abundance, exotic plants did have a significant influence over the native bee assemblage. The abundance of exotic plants was associated with a relative increase in the proportion of small and medium bee species. Moreover, Halictidae was the only family that appeared to be favored by an increase in the abundance of exotic plant species. We discuss these results and the urgent need for further research of high-altitude environments due to their vulnerability and high endemicity.

Genome sequencing and analysis of the first complete genome of Lactobacillus kunkeei strain MP2, an Apis mellifera gut isolate.

Background. The honey bee (Apis mellifera) is the most important pollinator in agriculture worldwide. However, the number of honey bees has fallen significantly since 2006, becoming a huge ecological problem nowadays. The principal cause is CCD, or Colony Collapse Disorder, characterized by the seemingly spontaneous abandonment of hives by their workers. One of the characteristics of CCD in honey bees is the alteration of the bacterial communities in their gastrointestinal tract, mainly due to the decrease of Firmicutes populations, such as the Lactobacilli. At this time, the causes of these alterations remain unknown. We recently isolated a strain of Lactobacillus kunkeei (L. kunkeei strain MP2) from the gut of Chilean honey bees. L. kunkeei, is one of the most commonly isolated bacterium from the honey bee gut and is highly versatile in different ecological niches. In this study, we aimed to elucidate in detail, the L. kunkeei genetic background and perform a comparative genome analysis with other Lactobacillus species. Methods. L. kunkeei MP2 was originally isolated from the guts of Chilean A. mellifera individuals. Genome sequencing was done using Pacific Biosciences single-molecule real-time sequencing technology. De novo assembly was performed using Celera assembler. The genome was annotated using Prokka, and functional information was added using the EggNOG 3.1 database. In addition, genomic islands were predicted using IslandViewer, and pro-phage sequences using PHAST. Comparisons between L. kunkeei MP2 with other L. kunkeei, and Lactobacillus strains were done using Roary. Results. The complete genome of L. kunkeei MP2 comprises one circular chromosome of 1,614,522 nt. with a GC content of 36,9%. Pangenome analysis with 16 L. kunkeei strains, identified 113 unique genes, most of them related to phage insertions. A large and unique region of L. kunkeei MP2 genome contains several genes that encode for phage structural protein and replication components. Comparative analysis of MP2 with other Lactobacillus species, identified several unique genes of L. kunkeei MP2 related with metabolism, biofilm generation, survival under stress conditions, and mobile genetic elements (MGEs). Discussion. The presence of multiple mobile genetic elements, including phage sequences, suggest a high degree of genetic variability in L. kunkeei. Its versatility and ability to survive in different ecological niches (bee guts, flowers, fruits among others) could be given by its genetic capacity to change and adapt to different environments. L. kunkeei could be a new source of Lactobacillus with beneficial properties. Indeed, L. kunkeei MP2 could play an important role in honey bee nutrition through the synthesis of components as isoprenoids.

Draft Genome of Chilean Honeybee (Apis mellifera) Gut Strain Lactobacillus kunkeei MP2.

Here, we report the first draft genome sequence of Lactobacillus kunkeei strain MP2, isolated from a Chilean honeybee gut. The sequenced genome has a total size of 1.58 Mb distributed into 44 contigs and 1,356 protein-coding sequences.