Identification and characterization of recent retrovirus in Rhinolophus ferrumequinum bats.

An investigation into retrovirus was conducted in six species of bats (Myotis aurascens, Myotis petax, Myotis macrodactylus, Miniopterus fuliginosus, Rhinolophus ferrumequinum, and Pipistrellus abramus) inhabiting South Korea. Exogenous retroviruses (XRVs) were detected in the tissue samples of R. ferrumequinum individuals by PCR assay. Proviruses were identified in all tissue samples through viral quantification using a digital PCR assay per organ (lung, intestine, heart, brain, wing, kidney, and liver), with viral loads varying greatly between each organ. In phylogenetic analysis based on the whole genome, the Korean bat retroviruses and the R. ferrumequinum retrovirus (RfRV) strain formed a new clade distinct from the Gammaretrovirus clade. The phylogenetic results determined these viruses to be RfRV-like viruses. In the Simplot comparison, Korean RfRV-like viruses exhibited relatively strong fluctuated patterns in the latter part of the envelope gene area compared to other gene areas. Several point mutations within this region (6,878-7,774 bp) of these viruses were observed compared to the RfRV sequence. One Korean RfRV-like virus (named Y4b strain) was successfully recovered in the Raw 264.7 cell line, and virus particles replicated in the cells were confirmed by transmission electron microscopy. RfRVs (or RfRV-like viruses) have been spreading since their first discovery in 2012, and the Korean RfRV-like viruses were assumed to be XRVs that evolved from RfRV.IMPORTANCER. ferrumequinum retrovirus (RfRV)-like viruses were identified in greater horseshoe bats in South Korea. These RfRV-like viruses were considered exogenous retroviruses (XRVs) that emerged from RfRV. Varying amounts of provirus detected in different organs suggest ongoing viral activity, replication, and de novo integration in certain organs. Additionally, the successful recovery of the virus in the Raw 264.7 cell line provides strong evidence supporting their status as XRVs. These viruses have now been identified in South Korea and, more recently, in Kenya since RfRV was discovered in China in 2012, indicating that RfRVs (or RfRV-like viruses) have spread worldwide.

The complete mitochondrial genome of long-tailed whiskered bat, Myotis frater (Myotis, Vespertilionidae).

Here, we report the complete mitogenome of Myotis frater with the GenBank accession number MH177276 as a first step to elucidate genetic characteristics of this species. Its mitogenome was 17,089 bp long and consisted of 13 protein-coding genes (PCGs), two rRNA genes, 22 tRNA genes, and a control region. The gene order and composition of M. frater was similar to that of most other vertebrates. The base composition of the 13 PCG in descending order was A (33.8%), C (22.7%), T (30.4%), and G (13.1%), with an AT content of 64.2%. Four overlapping regions in ATP8/ATP6, ATP6/COX3, ND4L/ND4, and ND5/ND6, among the 13 PCGs were found. The 935 bp long control region is located between tRNA-Pro and tRNA-Phe with 4 ATTACATAATACATTATATGTATAATCGTACATTAAATTAACTCCCACATGAATATTAAGCATGTCCATACTAATATTAAT-repeat at 5' region and 45 ACGCAT-repeat at 3' terminus. Phylogenetic analysis suggested that M. frater is most closely related to M. bechsteinii (KX757757), it was supported by 100% bootstrap under both ML and NJ tree.

Determination of plutonium content in high burnup pressurized water reactor fuel samples and its use for isotope correlations for isotopic composition of plutonium.

The content of plutonium isotopes in high burnup pressurized water reactor fuel samples was examined using both alpha spectrometry and mass spectrometry after anion exchange separation. The measured values were compared with results calculated by the ORIGEN-2 code. On average, the ratios (m/c) of the measured values (m) over the calculated values (c) were 1.22±0.16 for (238)Pu, 1.02±0.14 for (239)Pu, 1.08±0.06 for (240)Pu, 1.06±0.16 for (241)Pu, and 1.13±0.08 for (242)Pu. Using the Pu data obtained in this work, correlations were derived between the alpha activity ratios of (238)Pu/((239)Pu+(240)Pu), the alpha specific activities of Pu, and the atom % abundances of the Pu isotopes. Using these correlations, the atom % abundances of the plutonium isotopes in the target samples were calculated. These calculated results agreed within a range from 2 to 8% of the experimentally derived values according to the isotopes of plutonium.

Isotope correlations for determining the isotopic composition of plutonium in high burnup pressurized water reactor (PWR) samples.

Correlations among the alpha activity ratios of (238)Pu/((239)Pu+(240)Pu), the alpha specific activities of Pu and the atom % abundances of Pu isotopes were derived for the plutonium samples obtained from high burnup fuel samples from pressurized water reactors. Using the alpha activity ratios of (238)Pu/((239)Pu+(240)Pu) determined by alpha spectrometry, the alpha specific activities of Pu as well as the atom % abundances of the plutonium isotopes in the unknown samples were calculated without depending on mass spectrometry. The calculated alpha specific activities of Pu agreed with those determined by experiment within 2%, and the atom % abundances of the Pu isotopes agreed within 4% for (238)Pu, 5% for (239)Pu, 7% for (240)Pu and 5% for (242)Pu, respectively. In addition, an attempt was made to elucidate a correlation between the fuel burnup and the alpha activity ratio of (238)Pu/((239)Pu+(240)Pu) at a range of the burnup from 35.5 to 62.9 GWd/MtU.

Elution behavior for a large sample size of uranyl ions on reversed-phase columns using alpha-hydroxyisobutyric acid as an eluent.

Large sample sizes of uranyl ions are eluted on a strenedivinylbenzene copolymer phase and an octadecyl phase column, respectively, using alpha-hydroxyisobutyric acid (alpha-HiBA) as an eluent. Chromatograms are obtained from variations of the uranyl sample amounts, eluent concentrations, concentrations of the sample matrix, and the pH of the sample solution for both columns, respectively. Column capacities are estimated from the loading factors measured from the retention times of the peaks. Bandwidths of the peaks and apparent column efficiencies are measured as a function of the loading factor and calculated using the equations derived from the assumptions of a Langmuir isotherm for a single solute. Comparison between the experiment and the calculation reveals that the former showed a broader bandwidth and worse column efficiency than the latter for both columns. The two columns are compared with regards to the retention time, peak shape, column capacity, column efficiency, etc. The PRP-1 column shows a rectangular-, triangle-type peak shape, longer retention time, lower column capacity, and better column efficiency, and the LC-18 column shows a distorted Gaussian curve, shorter retention time, higher column capacity, and worse column efficiency. Column capacity, peak shape, and retention time are dependent on the eluent concentration rather than the alpha-HiBA concentration in the sample solutions.