Phage display and human disease detection.

Phage display is a significant and active molecular method and has continued crucial for investigative sector meanwhile its unearthing in 1985. This practice has numerous benefits: the association among physiology and genome, the massive variety of variant proteins showed in sole collection and the elasticity of collection that can be achieved. It suggests a diversity of stages for manipulating antigen attachment; yet, variety and steadiness of exhibited library are an alarm. Additional improvements, like accumulation of non-canonical amino acids, resulting in extension of ligands that can be recognized through collection, will support in expansion of the probable uses and possibilities of technology. Epidemic of COVID-19 had taken countless lives, and while indicative prescriptions were provided to diseased individuals, still no prevention was observed for the contamination. Phage demonstration has presented an in-depth understanding into protein connections included in pathogenesis. Phage display knowledge is developing as an influential, inexpensive, quick, and effectual method to grow novel mediators for the molecular imaging and analysis of cancer.

Insights into morphological and physio-biochemical adaptive responses in mungbean (Vigna radiata L.) under heat stress.

Mungbean (Vigna radiata L. Wilczek) is an important food legume crop which contributes significantly to nutritional and food security of South and Southeast Asia. The crop thrives in hot and humid weather conditions, with an optimal temperature range of 28°-35°C, and is mainly cultivated under rainfed environments. However, the rising global temperature has posed a serious threat to mungbean cultivation. Optimal temperature is a vital factor in cellular processes, and every crop species has evolved with its specific temperature tolerance ability. Moreover, variation within a crop species is inevitable, given the diverse environmental conditions under which it has evolved. For instance, various mungbean germplasm can grow and produce seeds in extreme ambient temperatures as low as 20°C or as high as 45°C. This range of variation in mungbean germplasm for heat tolerance plays a crucial role in developing heat tolerant and high yielding mungbean cultivars. However, heat tolerance is a complex mechanism which is extensively discussed in this manuscript; and at the same time individual genotypes have evolved with various ways of heat stress tolerance. Therefore, to enhance understanding towards such variability in mungbean germplasm, we studied morphological, anatomical, physiological, and biochemical traits which are responsive to heat stress in plants with more relevance to mungbean. Understanding heat stress tolerance attributing traits will help in identification of corresponding regulatory networks and associated genes, which will further help in devising suitable strategies to enhance heat tolerance in mungbean. The major pathways responsible for heat stress tolerance in plants are also discussed.

Molecular Fingerprinting and Phytochemical Investigation of Syzygium cumini L. from Different Agro-Ecological Zones of India.

Syzygium cumini L. (ver Jamun; BlackBerry) is a native, evergreen multipurpose tree species of India. Besides being a fruit tree and for agroforestry in different regions, it is medicinally important too. This study aimed to determine genetic diversity using molecular and phytochemical markers in sixteen genotypes of Indian S. cumini from different agro-ecological zones. The present study used a combination of ISSR markers and the HPLC technique to explore these genotypes. The results showed a wide genetic diversity range based on the similarity coefficient values observed in S. cumini sixteen accessions from different sites. Four primary phenolic acids were discovered in all the accessions; caffeic acid (CA) was found in high concentrations. The intraspecific association between molecular and phytochemical characteristics was the primary goal of this investigation. By employing gene-specific markers for the route of secondary metabolites (polyphenols) production, it further investigated the progressive research of diversity analysis of polyphenol content in S. cumini accessions, which may also expand its nutraceutical and pharmaceutical utilization.

Impact of nano-glass (NG) particles on seed germination and it's accumulation in plant parts of wheat (Triticum aestivum L.).

Micro/nano-contaminants have been the focal pollutants in environmental science, which includes several nanomaterials, nanocomposites, fibers, glass, plastics etc. Micro/nano size pollutants are more harmful than macro pollutants due to their size. Therefore, there is an urgent need for research on the possible fate of glass particles in the environment, especially in plant and soil systems. Here, the synthesized nano-glass (NG) from the waste windshield and analyzed its uptake and effect on the wheat (Triticum aestivum L.) plant system in a hydroponic solution. The findings provided direct evidence that NG reduced the germination % with increasing NG concentrations as 100, 96, 92, and 92% for 10, 20, 30, and 40 mg L-1. The lowest root and shoot height (15.40 and 22.42 cm) was achieved in the 40 mg L-1 NG treatment. Decrement in fresh and dry wt. with a maximum reduction of chlorophyll a, b and total content (6.19, 4.98, and 11.17 mg g-1 fresh wt.) was obtained at 40 mg L-1 at 21 days. Rhodamine B was used for fluorescence imaging in seedlings to detect NG movement, Results showed that NG moves via xylem tissues of root part to other parts of the plant. Based on the currently limited or no data and uncertainty regarding the actual impact of NG on soil and plant systems, suggested considerations to address key knowledge gaps are delineated. Further studies are required as a flora build-up of NG can have both environmental influence and consequences on agronomic sustainability and food safety.

Simultaneous detection of aqueous aluminum(III) and chromium(III) using Persea americana reduced and capped silver nanoparticles.

There is a significant interest to develop sensing devices that detect water toxins, especially heavy metal ions. Although there have already been numerical reports on detecting toxic heavy metal ions, the use of adaptable devices could enable a broader range of sensing applications. Here, we used fresh peel extract (PeA) and dried peel extract (DPeA) of Persea americana (Avocado) as a reducing and capping agent to synthesize and stabilize AgNPs. The dimensions of NPs were controlled by tuning pH, temperature, and volume of the reducing agent. The sensitivity and selectivity of the AgNPs toward various metal ions viz. Ni(II), Cd(II), Al(III), Hg(II), Cr(III), Ba(II), Pb(II), Zn(II), Co(II), Mn(II), Cu(II), Ca(II), Mg(II), and K(I) were studied. The detection probe was found to be selective and sensitive toward Al(III) and Cr(III) ions with the detection limit of 0.04 ppm and 0.05 ppm, respectively. High-resolution transmission electron microscope (HRTEM), ultraviolet-visible (UV-Vis) spectroscopy, and dynamic light scattering (DLS) analysis results confirm an agglomeration-based mechanism for sensing both metal ions. This method can be exploited for the colorimetric detection of toxic heavy metals in real water samples.

This is the first study to report the use of avocado peel extract to synthesize AgNPs in sensing aqueous Al(III) and Cr(III) at trace level concentration.

Overexpression of EcDREB2A transcription factor from finger millet in tobacco enhances tolerance to heat stress through ROS scavenging.

An extreme temperature regime beyond desired level imposes significant stress in crop plants. The low and high temperature stresses are one of the primary constraints for plant development and yield. Finger millet, being a climate resilient crop, is a potential source of novel stress tolerant genes. In this study, functional characterization of finger millet DREB2A gene in different abiotic stress conditions was done. This novel EcDREB2A transcription factor isolated from finger millet is a truncated version of DREB2A gene compared to previously reported DREB genes from other plant species. The overexpression of EcDREB2A in transgenic tobacco exhibits improved tolerance against heat stress 42 °C for up to 7 days, by altering physiology and biochemical means. However, same transgenic lines were unable to provide tolerance to 200 mM NaCl and 200 mM Mannitol stress. Under heat stress conditions, increased seed germination with improved lateral roots, fresh and dry weight relative to wild type (WT) was observed. The EcDREB2A transgenics exposed to heat stress showed improved rate of stomatal conductance, chlorophyll and carotenoids contents, and other photosynthesis parameters compared to WT plants. EcDREB2A overexpression also resulted in increased antioxidant enzyme activity (SOD, CAT, GR, POD and, APX) with decreased electrolyte leakage (EL), H2O2, and malondialdehyde (MDA) content than WT plants under heat stress. Quantitative real time expression analysis demonstrated that all eight downstream genes were significantly upregulated in transgenic plants only after heat stress. Our data provide a clear demonstration of the positive impact of overexpression of EcDREB2A providing heat stress tolerance to plants.

Naked eye colorimetric detection of fluoride through TiO2 NPs/CQDs based detector.

Fluoride (F-) occurs naturally in a soil, air and water as commonly found element in earth crusts. Almost 200 million populations worldwide and approximately 60 million in India are facing F- contamination problem. Therefore, development of low-cost and highly sensitive colorimetric detector for F- ions using carbon quantum dots (CQDs) and metal salts is required. For this, CQDs were synthesized using flower waste from temples by green method and further characterized. CQDs-TiO2 complex solution color changes from green to black on addition of F- ions due to exchange of F- ions with hydroxyl ions of the solution. Absorption spectrum of CQDs-TiO2 complex solution depicts change in spectral graph on adding F- ions with the appearance of new band at approx. 550 nm. The color spectral as a function of F- ions concentration gave a linear response in the range of 2-8 ppm (R2 = 0.9808). The color change can be observed at 2 ppm after incubation of 5 min by naked eye. Developed colorimetric detector shows high selectivity with other ions (Cl-, Br-, I- and H2PO4-). The F- ion detection was done in different water samples collected from districts of Haryana using developed detector. The developed colorimetric detector allows wide range of F- sensing for water sample even at every low concentration i.e 2 ppm.

Improvement in fluoride remediation technology using GIS based mapping of fluoride contaminated groundwater and microbe assisted phytoremediation.

Fluoride (F) in groundwater is a major issue of water pollution. Geo-statistical analysis of groundwater quality in Newai Tehsil, (India) has been done in order to identify the possible spatial distribution of water quality parameters and to assess the spatial dependence of water properties with the help of principal component analysis (PCA) structure. Two types of maps (spatial map and principal component map) of groundwater quality have been developed. A field experiment was conducted to investigate the effect of different Fluoride (F) concentration combined with Pseudomonas fluorescens (P.F) on Prosopis juliflora plant. The field design was used as completely randomized block design with three replicates. Study revealed that parameters were found to be positively and highly correlated with principal component. Low and high values (with their acceptable limit) have also been displayed over the each spatial map. Plants treated with P. fluorescens showed the highest F uptake in root, shoot and leaves tissues were 33.14, 19.41 and 15.15 mg kg-1 after 120 days, respectively. Both total bioaccumulation factor (BF) and translocation factor (TF) were obtained above one i.e., 1.06 and 1.04, this confirmed the high accumulation and translocation of F in plant tissues. The F uptake efficiency of plant was enhanced to 67.7% and plant biomass was increased upto 57.03%. According to the available literature, this is the first spatial field study for the remediation of F polluted soil through P. fluorescens. The present study will be beneficial for researchers working towards further improvement of F phytoremediation technology. Also, GIS based study can be very useful for decision maker's exploration of groundwater to understand the potential of present research work on fluoride contamination.

Effect of Fe3O4 NPs application on fluoride (F) accumulation efficiency of Prosopis juliflora.

Fluoride (F) pollution is a major worldwide problem affecting approximately 200 million people. Hyperaccumulator plant Prosopis juliflora has been used for the removal of F from contaminated soils; however it's low F accumulation efficiency and low biomass limits the phytoremediation efficiency. Present study deals with enhancement of F uptake efficiency of plant P. juliflora through iron oxide nanoparticles (Fe3O4 NPs) application for remediation of agricultural soils. For the study, Fe3O4 NPs were synthesized through green route using waste jojoba leaves. The application of Fe3O4 NPs significantly increased the shoot and root length of plant P. juliflora. Fe3O4 NPs treatment also promoted the F accumulation in shoot and root tissues upto 28.43 and 34.64 mg kg-1, respectively. Microscopic (FESEM and light microscopic) and EDX spectrum analysis of plant tissues confirmed the accumulation and translocation of Fe3O4 NPs and F in plant tissues This nano-phytoremediation approach could be a better option for F remediation for agricultural and commercial purpose.

Defluoridation technology for drinking water and tea by green synthesized Fe3O4/Al2O3 nanoparticles coated polyurethane foams for rural communities.

Fluoride (F) contaminated ground water poses a serious public health concern to rural population with unaffordable purification technologies. Therefore, development of a cost-effective, portable, environment and user-friendly defluoridation technique is imperative. In the present study, we report on the development of a green and cost-effective method that utilizes Fe3O4 and Al2O3 nanoparticles (NPs) that were synthesized using jojoba defatted meal. These NPs were impregnated on to polyurethane foam (PUF) and made into tea infusion bags. The Al2O3 NPs-PUF displayed a higher water defluoridation capacity of 43.47 mg g-1 of F as compared to 34.48 mg g-1 of F with Fe3O4 NPs-PUF. The synthesized Al2O3-PUF infusion bags removed the F that was under the permissible limit of 1.5 mg L-1. The sorption experiments were conducted to verify the effect of different parameters such as pH, contact time, size of PUF and initial F concentration. The different properties of adsorbent were characterized using a combination of FESEM, EDX, XRD and FTIR techniques, respectively. The calculated total cost per NPs-PUF pouch developed is as low as US $0.05, which makes the technology most suitable for rural communities. This paper will be beneficial for researchers working toward further improvement in water purification technologies.

Highly effective Cu/Zn-carbon micro/nanofiber-polymer nanocomposite-based wound dressing biomaterial against the P. aeruginosa multi- and extensively drug-resistant strains.

Pseudomonas aeruginosa (P. aeruginosa) is the most prevalent bacteria in the infections caused by burn, surgery, and traumatic injuries. Emergence of the P. aeruginosa bacterial resistance against various clinical drugs for wound treatment is the major concern nowadays. The present study describes the synthesis of the polyvinyl alcohol (PVA) and cellulose acetate phthalate (CAP) polymeric composite film (~0.2mm thickness) reinforced with the Cu/Zn bimetal-dispersed activated carbon micro/nanofiber (ACF/CNF), as a wound dressing material. The focus is on determining the efficacy of the prepared biomaterial against the multi and extensively drug-resistant P. aeruginosa strains isolated from the burning, surgical, and traumatic injury-wounds. The primary synthesis steps for the biomaterial include the mixing of a blend of CAP powder and the asymmetrically distributed Cu/Zn bimetals in ACF/CNF, into the polymerization reaction mixture of PVA. Biochemical tests showed that the prepared composite material significantly enhanced the in-vitro blood clotting rate, platelet aggregation, and macrophage cell proliferation, indicating the suitability of the material as a fast wound healer. The antibacterial tests performed against the P. aeruginosa strains showed that the material effectively suppressed the bacterial growth, with the bimetal nanoparticles dispersed in the material serving as an antibacterial agent. The PVA/CAP polymer composite served as an encapsulating agent providing a slow release of the nanoparticles, besides increasing the hemostatic properties of the biomaterial. The ACF/CNF served as a support to the dispersed bimetal nanoparticles, which also provided a mechanical and thermal stability to the material. Experimentally demonstrated to be biocompatible, the prepared metal-carbon-polymer nanocomposite in this study is an effective dressing material for the P. aeruginosa-infected wounds.

Copper/zinc bimetal nanoparticles-dispersed carbon nanofibers: A novel potential antibiotic material.

Copper (Cu) and zinc (Zn) nanoparticles (NPs) were asymmetrically distributed in carbon nanofibers (CNFs) grown on an activated carbon fiber (ACF) substrate by chemical vapor deposition (CVD). The CVD conditions were chosen such that the Cu NPs moved along with the CNFs during tip-growth, while the Zn NPs remained adhered at the ACF. The bimetal-ACF/CNF composite material was characterized by the metal NP release profiles, in-vitro hemolytic and antibacterial activities, and bacterial cellular disruption and adhesion assay. The synergetic effects of the bimetal NPs distributed in the ACFs/CNFs resulted from the relatively slower release of the Cu NPs located at the tip of the CNFs and faster release of the Zn NPs dispersed in the ACF. The Cu/Zn-grown ACFs/CNFs inhibited the growth of the Gram negative Escherichia coli, Gram positive Staphylococcus aureus, and Methicillin resistance Staphylococcus aureus bacterial strains, with superior efficiency (instant and prolonged inhibition) than the Cu or Zn single metal-grown ACFs/CNFs. The prepared bimetal-carbon composite material in this study has potential to be used in different biomedical applications such as wound healing and antibiotic wound dressing.

Effects of fluoride on germination, early growth and antioxidant enzyme activities of legume plant species Prosopis juliflora.

Prosopis juliflora (Mimosoideae) is a fast growing and drought resistant tree of semi-arid region of India where fluoride (F) toxicity is a common problem. In the present investigations this species was fluoride tested to check their capacity as bioindicator plant and its efficiency to accumulate. To achieve this aim, P. juliflora seedlings grown in hydroponic culture containing different concentrations of F were analyzed for germination percentage together with some biochemical parameters viz, antioxidant enzyme activities, total chlorophyll and accumulation of F in different plant parts. After 15 days of treatment, root growth (r = -0.928, p < 0.01), shoot growth (r = -0.976, p < 0.01), vigor index (r = -0.984, p < 0.01) were in decreasing trend with increasing concentration of NaF. Both catalase (3.2 folds) and peroxidase (2.7 folds) enzymes activity increased with increase in F concentration. Plant accumulated larger portion of the F in the roots (1024.63 microg g(-1) d.wt.) followed by shoot (492.30 microg g(-1) d.wt.). As P. juliflora did not show any morphological changes (marginal and tip chlorosis of leaf portions, necrosis and together these features are referred to as leaf "tip-burn") therefore, this species may be used as suitable bioindicator species for potentially F affected areas. Further, higher accumulation of F in roots indicates that P. juliflora is a suitable species for the removal of F in phytoremediation purposes.

Mapping of fluoride endemic area and assessment of F(-1) accumulation in soil and vegetation.

The prevalence of fluorosis is mainly due to the consumption of more fluoride (F(-1)) through drinking water, vegetables, and crops. The objective of the study was mapping of F(-1) endemic area of Newai Tehsil, Tonk district, Rajasthan, India. For the present study, water, soil (0-45 cm), and vegetation samples were collected from 17 villages. Fluoride concentration in water samples ranged from 0.3 to 9.8 mg/l. Out of 17 villages studied, the amounts of F(-1) content of eight villages were found to exceed the permissible limits. Labile F(-1) content and total F(-1) content in soil samples ranges 11.00-70.05 mg/l and 50.3-179.63 µg g(-1), respectively. F(-1) content in tree species was found in this order Azadirachta indica 47.32-55.76 µg g(-1) > Prosopis juliflora 40.16-49.63 µg g(-1) > Acacia tortilis 34.39-43.60 µg g(-1). While in case of leafy vegetables, F(-1) content order was Chenopodium album 54.23-98.42 µg g(-1) > Spinacea oleracea 30.41-64.09 µg g(-1) > Mentha arvensis 35.48-51.97 µg g(-1). The order of F(-1) content in crops was found as 41.04 µg g(-1) Pennisetum glaucum > 13.61 µg g(-1) Brassica juncea > 7.98 µg g(-1) Triticum sativum in Krishi Vigyan Kendra (KVK) farms. Among vegetation, the leafy vegetables have more F(-1) content. From the results, it is suggested that the people of KVK farms should avoid the use of highly F(-1) containing water for irrigation and drinking purpose. It has been recommended to the government authority to take serious steps to supply drinking water with low F(-1) concentration for the fluorosis affected villages. Further, grow more F(-1) hyperaccumulator plants in F(-1) endemic areas to lower the F(-1) content of the soils.

Organ-wise accumulation of fluoride in Prosopis juliflora and its potential for phytoremediation of fluoride contaminated soil.

Fluoride (F) contamination is a global environmental problem, as there is no cure of fluorosis available yet. Prosopis juliflora is a leguminous perennial, phreatophyte tree, widely distributed in arid and semi-arid regions of world. It extensively grows in F endemic areas of Rajasthan (India) and has been known as a "green" solution to decontaminate cadmium, chromium and copper contaminated soils. This study aims to check the tolerance potential of P. juliflora to accumulate fluoride. For this work, P. juliflora seedlings were grown for 75 d on soilrite under five different concentrations of F viz., control, 25, 50, 75 and 100 mg NaF kg(-1). Organ-wise accumulation of F, bioaccumulation factor (BF), translocation factor (TF), growth ratio (GR) and F tolerance index (TI) were examined. Plant accumulated high amounts of F in roots. The organ-wise distribution showed an accumulation 4.41 mg kg(-1)dw, 12.97 mg kg(-1)dw and 16.75 mg kg(-1)dw F, in stem, leaves and roots respectively. The results indicated significant translocation of F from root into aerial parts. The bioaccumulation and translocation factor values (>1.0) showed high accumulation efficiency and tolerance of P. juliflora to F. It is concluded that P. juliflora is a suitable candidate for phytoremediation purpose and can be explored further for the decontamination of F polluted soils.

Effect of fluoride pollution on genetic diversity of a medicinal tree, Syzygium cumini.

Syzygium cumini Linn. (Myrtaceae) is a medicinal tree (Jamun) used worldwide in treatment of diabetes. However, no molecular data is available on genetic polymorphism and its relationship, if any with fluoride pollution. In the present study, the genetic variability of two populations of S. cumini growing in fluoride rich soils and normal soils located in Rajasthan and Haryana regions of India, respectively was determined using random amplified polymorphic DNA (RAPD) markers. Different measures of diversity in Rajasthan populations: Shannon's index of phenotypic diversity (I) = 0.440; Nei's genetic diversity (h) = 0.292; effective number of alleles per locus (Ne) = 1.497; total species diversity (Hsp) = 0.307 and within population diversity (Hpop) = 0.158 showed high diversity in comparison to Haryana populations. Thus, it seems that Rajasthan population responds with increased genetic variation resulting possibly from new mutation that affect allele frequencies as a consequence of adaptation to contaminated environment. This may imply that the increased diversity levels may act as a buffer to combat fluoride stress. Cluster analysis and principal component analysis (PCA) results showed mixing between the populations.

Genetic differentiation and diversity analysis of medicinal tree Syzygium cumini (Myrtaceae) from ecologically different regions of India.

This study represents the agro-ecological zone wise surveys of molecular variation of important medicinal tree Syzygium cumini Linn. (Jamun) which is native to India. It is used world wide in treatment of diabetes. Despite of its diverse medicinal properties no molecular data is available about the pattern of variation in its natural range. Populations of S. cumini in India are located in different habitats which differ from each other with regard to ecological factors. In this study, random amplified polymorphic DNA (RAPD) markers were used to detect inter and intra levels of genetic variations of sixteen S. cumini genotypes collected from three major agro-ecological zones of India. A total of 220 amplification products were scored of which 87.50 % were polymorphic. The level of polymorphism ranged from 47.69 % to 74.87 % polymorphic bands per population and was correlated with population size. Different measures of diversity: Shannon's index of phenotypic diversity (I) = 0.451 ± 0.230; Nei's genetic diversity (h) = 0.300 ± 0.172; effective number of alleles per locus (Ne) = 1.51 ± 0.347; total species diversity (Hsp) = 0.315 ± 0.031 and within population diversity (Hpop) = 0.158 ± 0.104 showed high genetic diversity at species level. Coefficient of genetic differentiation (Gst =0.498; Nm = 0.503) revealed significant genetic differentiation among the populations. Most of the genetic variations are contained among the populations. The results of cluster analysis and principal component analysis (PCA) give only little evidence for an ecotypic differentiation of S. cumini populations. Present genetic structure of population suggests ex situ conservation in seed banks in which seeds from at least five populations need to collected and conserved. Secondly, our study provides practical information to herbal drugs manufactures who use Jamun as a raw material.