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1.
Artigo em Inglês | MEDLINE | ID: mdl-37938951

RESUMO

In this study, we propose LDMRes-Net, a lightweight dual-multiscale residual block-based convolutional neural network tailored for medical image segmentation on IoT and edge platforms. Conventional U-Net-based models face challenges in meeting the speed and efficiency demands of real-time clinical applications, such as disease monitoring, radiation therapy, and image-guided surgery. In this study, we present the Lightweight Dual Multiscale Residual Block-based Convolutional Neural Network (LDMRes-Net), which is specifically designed to overcome these difficulties. LDMRes-Net overcomes these limitations with its remarkably low number of learnable parameters (0.072M), making it highly suitable for resource-constrained devices. The model's key innovation lies in its dual multiscale residual block architecture, which enables the extraction of refined features on multiple scales, enhancing overall segmentation performance. To further optimize efficiency, the number of filters is carefully selected to prevent overlap, reduce training time, and improve computational efficiency. The study includes comprehensive evaluations, focusing on the segmentation of the retinal image of vessels and hard exudates crucial for the diagnosis and treatment of ophthalmology. The results demonstrate the robustness, generalizability, and high segmentation accuracy of LDMRes-Net, positioning it as an efficient tool for accurate and rapid medical image segmentation in diverse clinical applications, particularly on IoT and edge platforms. Such advances hold significant promise for improving healthcare outcomes and enabling real-time medical image analysis in resource-limited settings.

2.
Neural Netw ; 165: 310-320, 2023 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-37327578

RESUMO

Timely and affordable computer-aided diagnosis of retinal diseases is pivotal in precluding blindness. Accurate retinal vessel segmentation plays an important role in disease progression and diagnosis of such vision-threatening diseases. To this end, we propose a Multi-resolution Contextual Network (MRC-Net) that addresses these issues by extracting multi-scale features to learn contextual dependencies between semantically different features and using bi-directional recurrent learning to model former-latter and latter-former dependencies. Another key idea is training in adversarial settings for foreground segmentation improvement through optimization of the region-based scores. This novel strategy boosts the performance of the segmentation network in terms of the Dice score (and correspondingly Jaccard index) while keeping the number of trainable parameters comparatively low. We have evaluated our method on three benchmark datasets, including DRIVE, STARE, and CHASE, demonstrating its superior performance as compared with competitive approaches elsewhere in the literature.


Assuntos
Aprendizado Profundo , Redes Neurais de Computação , Algoritmos , Processamento de Imagem Assistida por Computador/métodos , Vasos Retinianos/diagnóstico por imagem
3.
Microsc Res Tech ; 86(11): 1443-1460, 2023 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-37194727

RESUMO

Exudates are a common sign of diabetic retinopathy, which is a disease that affects the blood vessels in the retina. Early detection of exudates is critical to avoiding vision problems through continuous screening and treatment. In traditional clinical practice, the involved lesions are manually detected using photographs of the fundus. However, this task is cumbersome and time-consuming and requires intense effort due to the small size of the lesion and the low contrast of the images. Thus, computer-assisted diagnosis of retinal disease based on the detection of red lesions has been actively explored recently. In this paper, we present a comparison of deep convolutional neural network (CNN) architectures and propose a residual CNN with residual skip connections to reduce the parameter for the semantic segmentation of exudates in retinal images. A suitable image augmentation technique is used to improve the performance of network architecture. The proposed network can robustly segment exudates with high accuracy, which makes it suitable for diabetic retinopathy screening. A comparative performance analysis of three benchmark databases: E-ophtha, DIARETDB1, and Hamilton Ophthalmology Institute's Macular Edema, is presented. The proposed method achieves a precision of 0.95, 0.92, 0.97, accuracy of 0.98, 0.98, 0.98, sensitivity of 0.97, 0.95, 0.95, specificity of 0.99, 0.99, 0.99, and area under the curve of 0.97, 0.94, and 0.96, respectively. RESEARCH HIGHLIGHTS: The research focuses on the detection and segmentation of exudates in diabetic retinopathy, a disease affecting the retina. Early detection of exudates is important to avoid vision problems and requires continuous screening and treatment. Currently, manual detection is time-consuming and requires intense effort. The authors compare qualitative results of the state-of-the-art convolutional neural network (CNN) architectures and propose a computer-assisted diagnosis approach based on deep learning, using a residual CNN with residual skip connections to reduce parameters. The proposed method is evaluated on three benchmark databases and demonstrates high accuracy and suitability for diabetic retinopathy screening.

4.
IEEE/ACM Trans Comput Biol Bioinform ; 20(2): 1363-1371, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-36194721

RESUMO

Achieving accurate retinal vessel segmentation is critical in the progression and diagnosis of vision-threatening diseases such as diabetic retinopathy and age-related macular degeneration. Existing vessel segmentation methods are based on encoder-decoder architectures, which frequently fail to take into account the retinal vessel structure's context in their analysis. As a result, such methods have difficulty bridging the semantic gap between encoder and decoder characteristics. This paper proposes a Prompt Deep Light-weight Vessel Segmentation Network (PLVS-Net) to address these issues by using prompt blocks. Each prompt block use combination of asymmetric kernel convolutions, depth-wise separable convolutions, and ordinary convolutions to extract useful features. This novel strategy improves the performance of the segmentation network while simultaneously decreasing the number of trainable parameters. Our method outperformed competing approaches in the literature on three benchmark datasets, including DRIVE, STARE, and CHASE.


Assuntos
Benchmarking , Degeneração Macular , Humanos , Degeneração Macular/diagnóstico por imagem , Vasos Retinianos/diagnóstico por imagem , Semântica
5.
Sci Rep ; 12(1): 22286, 2022 12 24.
Artigo em Inglês | MEDLINE | ID: mdl-36566313

RESUMO

Recent progress in encoder-decoder neural network architecture design has led to significant performance improvements in a wide range of medical image segmentation tasks. However, state-of-the-art networks for a given task may be too computationally demanding to run on affordable hardware, and thus users often resort to practical workarounds by modifying various macro-level design aspects. Two common examples are downsampling of the input images and reducing the network depth or size to meet computer memory constraints. In this paper, we investigate the effects of these changes on segmentation performance and show that image complexity can be used as a guideline in choosing what is best for a given dataset. We consider four statistical measures to quantify image complexity and evaluate their suitability on ten different public datasets. For the purpose of our illustrative experiments, we use DeepLabV3+ (deep large-size), M2U-Net (deep lightweight), U-Net (shallow large-size), and U-Net Lite (shallow lightweight). Our results suggest that median frequency is the best complexity measure when deciding on an acceptable input downsampling factor and using a deep versus shallow, large-size versus lightweight network. For high-complexity datasets, a lightweight network running on the original images may yield better segmentation results than a large-size network running on downsampled images, whereas the opposite may be the case for low-complexity images.


Assuntos
Processamento de Imagem Assistida por Computador , Redes Neurais de Computação , Processamento de Imagem Assistida por Computador/métodos , Custos e Análise de Custo
6.
Comput Biol Med ; 151(Pt A): 106277, 2022 12.
Artigo em Inglês | MEDLINE | ID: mdl-36370579

RESUMO

Automated retinal image analysis holds prime significance in the accurate diagnosis of various critical eye diseases that include diabetic retinopathy (DR), age-related macular degeneration (AMD), atherosclerosis, and glaucoma. Manual diagnosis of retinal diseases by ophthalmologists takes time, effort, and financial resources, and is prone to error, in comparison to computer-aided diagnosis systems. In this context, robust classification and segmentation of retinal images are primary operations that aid clinicians in the early screening of patients to ensure the prevention and/or treatment of these diseases. This paper conducts an extensive review of the state-of-the-art methods for the detection and segmentation of retinal image features. Existing notable techniques for the detection of retinal features are categorized into essential groups and compared in depth. Additionally, a summary of quantifiable performance measures for various important stages of retinal image analysis, such as image acquisition and preprocessing, is provided. Finally, the widely used in the literature datasets for analyzing retinal images are described and their significance is emphasized.


Assuntos
Retinopatia Diabética , Degeneração Macular , Doenças Retinianas , Humanos , Fundo de Olho , Retina/diagnóstico por imagem , Retinopatia Diabética/diagnóstico por imagem , Doenças Retinianas/diagnóstico por imagem , Algoritmos
7.
Diagnostics (Basel) ; 11(1)2021 Jan 12.
Artigo em Inglês | MEDLINE | ID: mdl-33445723

RESUMO

Automated detection of vision threatening eye disease based on high resolution retinal fundus images requires accurate segmentation of the blood vessels. In this regard, detection and segmentation of finer vessels, which are obscured by a considerable degree of noise and poor illumination, is particularly challenging. These noises include (systematic) additive noise and multiplicative (speckle) noise, which arise due to various practical limitations of the fundus imaging systems. To address this inherent issue, we present an efficient unsupervised vessel segmentation strategy as a step towards accurate classification of eye diseases from the noisy fundus images. To that end, an ensemble block matching 3D (BM3D) speckle filter is proposed for removal of unwanted noise leading to improved detection. The BM3D-speckle filter, despite its ability to recover finer details (i.e., vessels in fundus images), yields a pattern of checkerboard artifacts in the aftermath of multiplicative (speckle) noise removal. These artifacts are generally ignored in the case of satellite images; however, in the case of fundus images, these artifacts have a degenerating effect on the segmentation or detection of fine vessels. To counter that, an ensemble of BM3D-speckle filter is proposed to suppress these artifacts while further sharpening the recovered vessels. This is subsequently used to devise an improved unsupervised segmentation strategy that can detect fine vessels even in the presence of dominant noise and yields an overall much improved accuracy. Testing was carried out on three publicly available databases namely Structured Analysis of the Retina (STARE), Digital Retinal Images for Vessel Extraction (DRIVE) and CHASE_DB1. We have achieved a sensitivity of 82.88, 81.41 and 82.03 on DRIVE, SATARE, and CHASE_DB1, respectively. The accuracy is also boosted to 95.41, 95.70 and 95.61 on DRIVE, SATARE, and CHASE_DB1, respectively. The performance of the proposed methods on images with pathologies was observed to be more convincing than the performance of similar state-of-the-art methods.

8.
Cureus ; 12(11): e11322, 2020 Nov 04.
Artigo em Inglês | MEDLINE | ID: mdl-33304665

RESUMO

Introduction Acute myocardial infarction (AMI) is a devastating medical emergency that requires immediate pharmacological and radiological intervention. With the advent of techniques such as percutaneous coronary intervention (PCI), pacemakers, and percussion pacing, survival rates have improved significantly. However, there are certain factors and complications associated with AMI that still lead to a high mortality rate, such as old age, advanced heart disease, diabetes mellitus (DM), and arrhythmias. Factors such as the type of arrhythmia, the heart rate, and the level at which dissociation occurs between atrial and ventricular rhythm all influence mortality and morbidity rates. Outcomes are further influenced by the sex of the patient, the type of AMI [ST-elevation myocardial infarction (STEMI) or non-ST-elevation myocardial infarction (NSTEMI)], history of smoking, arrival times at the hospital, presence of hyperglycemia, previous history of cardiac surgery, and the need for a temporary pacemaker or a permanent pacemaker. As with most scientific studies, local data from Pakistan is hard to find on this topic as well. With this study, we hope to contribute valuable information and updates to the study of a developing problem from the developing world. Objective We aimed to analyze the frequency and outcomes of different types of arrhythmia in AMI. Methods This study involved a retrospective observational cohort. It was conducted at the National Institute of Cardiovascular Diseases (NICVD), Karachi from January 2019 to July 2019 (six months). All data were retrieved from the online database at the NICVD. Written consent was obtained from all patients. Patient confidentiality was ensured at all times. Results A total of 500 patients were included in the study. The mean age of our cohort was 56.17 ±14.01 years. NSTEMI was more prevalent than STEMI. Sinus arrhythmia (SA) was the most frequently recorded arrhythmia and had the best survival rates. Atrioventricular (AV) nodal blocks and ventricular tachycardia (VT) had the worst outcomes. The overall mortality rate was 11.4%, and the mean in-hospital length of stay was 2.07 ±1.54 days. Smoking increased mortality in all cases. Conclusions AMI is complicated by several types of arrhythmia. SA is the most common arrhythmia in AMI. Mortality in AMI is largely due to AV nodal blocks and VT. Smoking increases mortality in all cases.

9.
Cureus ; 12(8): e10145, 2020 Aug 30.
Artigo em Inglês | MEDLINE | ID: mdl-33014643

RESUMO

Background Statins or 3-hydroxy-3-methyl-glutaryl-coenzyme A (HMG-CoA) reductase inhibitors are one of the most commonly prescribed medications in cardiac patients. Just like any other class of drugs, they have the potential to cause liver injury over time even with judicious use. This drug-induced liver injury (DILI) can be either direct (hepatocellular) or idiosyncratic. As with multiple other hepatic pathologies, DILI may be asymptomatic or clinically silent. Therefore, it is prudent to carry out liver function tests (LFTs) from time to time. LFTs are an inexpensive, noninvasive, and quick first-line investigation to monitor liver status. However, the pattern of liver injury with statin use is not specific and a correlation over time may not be apparent. Aims To evaluate derangement in LFTs over time with respect to statin use and determine if a correlation exists. Methods This was a retrospective observational cohort. All data were collected from the online database of the National Institute of Cardiovascular Diseases (NICVD), Karachi. Patients admitted to the NICVD from July 1, 2018, to December 31, 2018, were eligible for inclusion in the study. Only patients already taking a statin (in any dose) were considered for inclusion. LFTs were recorded from the database at inclusion, post-induction at six and 12 months. Extensive workup was done and great care taken to rule out other diseases that may have affected the LFTs. Results Two hundred and four patients were eventually inducted into the study after a meticulous exclusion process. The male to female ratio was 4:1. The mean duration of statin use before induction into the study was 19.92±14.34 months. Patients were predominantly using only one of two statins, i.e., rosuvastatin 20mg/day or atorvastatin 40 mg/day. Elevations of LFTs were seen with both drugs throughout the study period. These elevations were almost always <2x the upper limit of normal (ULN); greater elevations were seen with atorvastatin 40 mg/day. The derangement in LFTs persisted and improvement was not seen. Conclusions Statins cause dose-dependent borderline elevations of liver function tests over time. These elevations are clinically and statistically insignificant and should not deter physicians from prescribing or continuing statins.

10.
PLoS One ; 15(1): e0227566, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-31999720

RESUMO

Automatic optic disc (OD) localization and segmentation is not a simple process as the OD appearance and size may significantly vary from person to person. This paper presents a novel approach for OD localization and segmentation which is fast as well as robust. In the proposed method, the image is first enhanced by de-hazing and then cropped around the OD region. The cropped image is converted to HSV domain and then V channel is used for OD detection. The vessels are extracted from the Green channel in the cropped region by multi-scale line detector and then removed by the Laplace Transform. Local adaptive thresholding and region growing are applied for binarization. Furthermore, two region properties, eccentricity, and area are then used to detect the true OD region. Finally, ellipse fitting is used to fill the region. Several datasets are used for testing the proposed method. Test results show that the accuracy and sensitivity of the proposed method are much higher than the existing state-of-the-art methods.


Assuntos
Processamento de Imagem Assistida por Computador/métodos , Disco Óptico/diagnóstico por imagem , Algoritmos , Artefatos , Bases de Dados Factuais , Humanos
11.
Sensors (Basel) ; 19(22)2019 Nov 13.
Artigo em Inglês | MEDLINE | ID: mdl-31766276

RESUMO

The assessment of transformations in the retinal vascular structure has a strong potential in indicating a wide range of underlying ocular pathologies. Correctly identifying the retinal vessel map is a crucial step in disease identification, severity progression assessment, and appropriate treatment. Marking the vessels manually by a human expert is a tedious and time-consuming task, thereby reinforcing the need for automated algorithms capable of quick segmentation of retinal features and any possible anomalies. Techniques based on unsupervised learning methods utilize vessel morphology to classify vessel pixels. This study proposes a directional multi-scale line detector technique for the segmentation of retinal vessels with the prime focus on the tiny vessels that are most difficult to segment out. Constructing a directional line-detector, and using it on images having only the features oriented along the detector's direction, significantly improves the detection accuracy of the algorithm. The finishing step involves a binarization operation, which is again directional in nature, helps in achieving further performance improvements in terms of key performance indicators. The proposed method is observed to obtain a sensitivity of 0.8043, 0.8011, and 0.7974 for the Digital Retinal Images for Vessel Extraction (DRIVE), STructured Analysis of the Retina (STARE), and Child Heart And health Study in England (CHASE_DB1) datasets, respectively. These results, along with other performance enhancements demonstrated by the conducted experimental evaluation, establish the validity and applicability of directional multi-scale line detectors as a competitive framework for retinal image segmentation.


Assuntos
Algoritmos , Processamento de Imagem Assistida por Computador , Vasos Retinianos/diagnóstico por imagem , Adulto , Idoso , Idoso de 80 Anos ou mais , Bases de Dados como Assunto , Difusão , Fundo de Olho , Humanos , Pessoa de Meia-Idade
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