Quantifying the impacts of 166 years of land cover change on lowland bird communities.

Land cover change for agriculture is thought to be a major threat to global biodiversity. However, its ecological impact has rarely been quantified in the Northern Hemisphere, as broad-scale conversion to farmland mainly occurred until the 1400s-1700s in the region, limiting the availability of sufficient data. The Ishikari Lowland in Hokkaido, Japan, offers an excellent opportunity to address this issue, as hunter-gatherer lifestyles dominated this region until the mid-nineteenth century and land cover maps are available for the period of land cover changes (i.e. 1850-2016). Using these maps and a hierarchical community model of relationships between breeding bird abundance and land cover types, we estimated that broad-scale land cover change over a 166-year period was associated with more than 70% decline in both potential species richness and abundance of avian communities. We estimated that the abundance of wetland and forest species declined by greater than 88%, whereas that of bare-ground/farmland species increased by more than 50%. Our results suggest that broad-scale land cover change for agriculture has led to drastic reductions in wetland and forest species and promoted changes in community composition in large parts of the Northern Hemisphere. This study provides potential baseline information that could inform future conservation policies.

Migration-tracking integrated phylogeography supports long-distance dispersal-driven divergence for a migratory bird species in the Japanese archipelago.

Long-distance dispersal (LDD) outside a species' breeding range contributes to genetic divergence. Previous phylogeographic studies of migratory bird species have not discriminated LDD from vicariant speciation in their diversification process. We conducted an integrative phylogeographic approach to test the LDD hypothesis, which predicts that a Japanese migratory bird subspecies diverged from a population in the coastal region of the East China Sea (CRECS) via LDD over the East China Sea (ECS). Haplotype networks of both mitochondrial and nuclear genes of its three subspecies were reconstructed to examine whether the Japanese subspecies of the Brown Shrike (Lanius cristatus superciliosus) diverged from an ancestral CRECS population. A species distribution model (SDM) for the Japanese subspecies was constructed using bioclimatic variables under the maximum entropy algorithm. It was projected backwards to the climate of the last glacial maximum (LGM) to infer the candidate source area of colonization. A migratory route of L. c. superciliosus, which possibly reflects a candidate past colonization route, was tracked by light-level geolocators. Molecular phylogenetic networks suggest that the Japanese subspecies diverged from a population in the CRECS and maintained anciently diverged haplotypes. The SDM inferred that the emerged continental shelf of the ECS and the present CRECS were suitable breeding areas for the Japanese subspecies during the LGM. A major migratory route for L. c. superciliosus was inferred between the CRECS and the Japanese archipelago across the ECS. Our integrative approach supported the LDD hypothesis for divergence of the Japanese subspecies of the Brown Shrike. Shrinkage of the ECS may have been responsible for successful population establishment, due to a sufficient number of migrants overshooting to the Japanese archipelago from the CRECS. Our framework provides a new phylogeographic scenario for this region. Discriminating LDD and vicariance models helps improve our understanding of the phylogeographic histories of migratory species.

A complete dietary review of Japanese birds with special focus on molluscs.

Birds often hold important positions in the food webs of ecosystems. As a result, interactions between birds and their prey have attracted attention not only in ecology, but also in fields like agriculture and conservation. Avian food resources are well researched in Japan, however there is no database critically reviewing molluscs as a food resource for birds. Here, we present a new database reviewing dietary information for all Japanese bird species. In addition to addressing general diet categories and specific food habits for each bird, we include detailed data on the molluscan prey observed for all species that consume them. The information within this database was collected through intense literary review to provide a complete look at bird species historically present around the country. We also include new information on snail species found in the upper digestive tract of harvested wild birds. This database is publicly available in the Zenodo repository. The information should aid research around the Japanese archipelago, especially projects involving birds or molluscs.