Soil enzyme profile analysis for indicating decomposer micro-food web.

Highly diverse exoenzymes mediate the energy flow from substrates to the multitrophic microbiota within the soil decomposer micro-food web. Here, we used a "soil enzyme profile analysis" approach to establish a series of enzyme profile indices; those indices were hypothesized to reflect micro-food web features. We systematically evaluated the shifts in enzyme profile indices in relation to the micro-food web features in the restoration of an abandoned cropland to a natural area. We found that enzymatic C:N stoichiometry and decomposability index were significantly associated with substrate availability. Furthermore, the higher Shannon diversity index in the exoenzyme profile, especially for the C-degrading hydrolase, corresponded to a greater microbiota community diversity. The increased complexity and stability of the exoenzyme network reflected similar changes with the micro-food web networks. In addition, the gross activity of the enzyme profile as a parameter for soil multifunctionality, effectively predicted the substrate content, microbiota community size, diversity, and network complexity. Ultimately, the proposed enzymic channel index was closely associated with the traditional decomposition channel indices derived from microorganisms and nematodes. Our results showed that soil enzyme profile analysis reflected very well the decomposer food web features. Our study has important implications for projecting future climate change or anthropogenic disturbance impacts on soil decomposer micro-food web features by using soil enzyme profile analysis.

Examining the Shift in the Decomposition Channel Structure of the Soil Decomposer Food Web: A Methods Comparison.

Selecting the appropriate indicators and measuring time point numbers is important for accurately examining the shift in soil gross decomposition channel structure. Through a selected case study on a natural forest vs. rainfed arable system over a two-month-long experiment, the utility of three commonly employed indicators (fungi to bacteria ratio (F:B), fungivore to bacterivore ratio (FF:BF), and glucosamine to muramic acid ratio (GlcN:MurN)) were compared to reflect the shift in soil gross decomposition channel structure. The requirement of measuring the time point numbers for the three indicators was also assessed, and we suggest a potential methodology. Our results revealed that the GlcN:MurN ratio was more reliable for assessing the shifts in gross decomposition channel structure for long-term land use changes, while it was less sensitive to short-term drought compared with the other two indicators. The F:B ratio was more applicable than the FF:BF ratio for reflecting both long- and short-term changes. Furthermore, the reliability of the GlcN:MurN ratio was the least dependent on measuring time point numbers. We suggest the use of multiple indicators and the adoption of multiple measuring time points for the overall methodology.

Effects of seasonal temperature regimes on embryo growth and endogenous hormones of Taxus chinensis var. mairei seeds.

Seed dormancy is a mechanism that prevents seeds from germinating at times of the year when conditions are unfavorable, that is, when the chance of seed survival is low. Determining the seasonal dynamics of seed dormancy is important for exploring how plant regeneration is adapted to the environment. We studied the seed dormancy status of Taxus chinensis var. mairei, an endangered species in China, under simulated seasonal temperature regimes. The embryo length, embryo-to-seed (E : S) ratio, and percentage of seeds with a split seed coat increased when seeds were stratified at spring and autumn temperature regimes. The abscisic acid (ABA) content decreased during stratification at simulated seasonal temperatures, but no obvious pattern in the content of gibberellic acid (GA) and indole acetic acid (IAA) was observed. The GA-ABA and IAA-ABA ratios increased during stratification. These results suggest that T. chinensis var. mairei seeds have morphophysiological dormancy, and that the seasonal dynamics of seed dormancy break are controlled by endogenous hormones and their balances, which was confirmed by the results of a field experiment. Our study provides useful information for understanding the natural population regeneration and propagation of this threatened species.

[Response Characteristics of Soil Microbial Community Under Long-term Film Mulching].

Film mulching is an important practice to increase the yield and income in agricultural production. Soil samples were collected from four farmland sites with different mulching years to reveal the effect of long-term plastic mulching on characteristics of soil microbial community structure. In order to explore the long-term effect of soil microbial community change and its effect on the microbial ecological environment, high-throughput sequencing technology was used to analyze the changes in soil bacterial and fungal community structure. The results showed that long-term film mulching had no significant effect on soil bacterial diversity but decreased fungal diversity. Long-term film mulching decreased the abundance of Acidobacteriota and Mortierellomycetes and increased the abundance of Actinobacteriota. Long-term film mulching enriched the beneficial microbial communities such as Bacillus, Nocardioidaceae, Aspergillus, and Hypocreales in soil. However, long-term film mulching indued a simple and fragile soil fungal co-occurrence network pattern. The unidentified Sordariales under Ascomycota was the only key species in the fungal co-occurrence network, which resulted in potential risks to the ecological environment of the farmland soil. This study provided a theoretical basis for further understanding the effects of long-term film mulching on the ecological and environmental effects of microorganisms in farmland.

Microplastics in soil can increase nutrient uptake by wheat.

Microplastics can perturb microbial nutrient-mining strategies. However, the mechanism by which microplastics affect the resource-acquisition strategies of crops in agricultural systems remains unknown. The nutrient-acquisition potential of crops and microbes was investigated under treatments with two common microplastics (polyethylene [PE] and polyvinyl chloride [PVC]) at 0%, 1%, and 5% (w/w). Different root resource-acquisition strategies disturbed microbial nutrient turnover in the rhizosphere in response to microplastic addition. Specifically, the ß-1,4-glucosidase (BG) hotspot expanded, whereas the rhizosphere expansion of BG activity decreased. A decrease of less than PE1% (w/w) and an expansion of less than PE5% (w/w) in the 1,4-N-acetyl-glucosaminidase (NAG) hotspot with wider rhizosphere expansion of NAG activity indicated that higher doses of PE allow roots to uptake additional N. The phosphomonoesterase (PHOS) hotspot decreased in PE1% (w/w) and expanded in PE5% (w/w), but rhizosphere expansion did not change under PE treatments. However, both NAG and PHOS hotspots expanded with decreasing rhizosphere expansion under PVC treatments, indicating that PVC limits the utilization of available N and P, forcing the crop to obtain nutrients from the narrow root zone. These results indicate that adding PE microplastics increases the demand for and consumption of NH4+-N and NO3--N by wheat.

[Effects of Plastic Mulch Film on Soil Nutrients and Ecological Enzyme Stoichiometry in Farmland].

Ecological enzyme stoichiometry can be used to evaluate the limit of soil microbial energy and nutrient resources. To illustrate the effects of plastic mulch film on soil ecological enzyme stoichiometry in farmland, this study collected soil with different amounts of mulching film residual and used the fluorescence analysis to determine the activities of key enzymes for the carbon, nitrogen, and phosphorus cycle processes including ß-1,4-glycosidase (BG), ß-1,4-N-acetyl amino glycosidase (NAG), and phosphatase (ACP) activity. This study investigated the effects of plastic mulch film on soil nutrient cycling and supply in farmland. The results showed that in the soil with chemical fertilizer, plastic film mulching decreased soil Olsen-P and NO3--N contents to 48%-62% and 16%-24% of those in the soil without plastic film mulching, respectively. In the soil with the combined application of organic-chemical fertilizers, plastic film mulching increased Olsen-P and NO3--N contents by 144%-203% and 1.9-5.1 times, respectively. In the organic-chemical fertilization soils, plastic film mulching decreased SOC:TN in soils by 6.6%-25.8%, whereas it increased SOC:TP and TN:TP significantly. MBC, MBN, and MBP contents in the soil with plastic film mulching were significantly lower than that in non-plastic film mulching farmland, and there were no significant differences in MBC:MBN and MBC:MBP between soil with and without plastic film mulching. The MBN:MBP was reduced by 36.6% and 23.8% in S1 and S2, and 5.4 and 1.3 times in S3 and S4 by plastic film mulching, respectively. The change pattern of NAG:ACP in soil was similar to that of the corresponding elements ratio in microbial biomass. In the soil from plastic film mulching, the ratio of BG:NAG was 1.3-15 times higher in organic-chemical fertilization soils than that with only chemical fertilizer. In conclusion, plastic film mulching reduced the availability of soil nutrients, and organic-chemical fertilization alleviated the limitation of soil nutrients to a certain extent. This study deepened the understanding of the response of soil microorganisms to nutrient cycling after plastic film mulching. It provides a theoretical basis for optimizing the farmland management in the use of plastic film.

Horizontal gene transfer is a key determinant of antibiotic resistance genes profiles during chicken manure composting with the addition of biochar and zeolite.

Livestock manure is an important reservoir of antibiotic resistance genes (ARGs). Biochar and zeolite are commonly used to improve the quality of compost, however, little is known about the impacts of these additives on the fate of ARGs during composting and the underlying mechanisms involved. In this study, zeolite (ZL), biochar (BC), or zeolite and biochar (ZB) simultaneously were added to chicken manure compost to evaluate their effects on the ARGs patterns. After composting, the abundance of ARGs reduced by 92.6% in control, while the reductions were 95.9%, 98.7% and 98.2% for ZL, BC, ZB, respectively. Co-occurrence network analysis indicated that the potential hosts for most ARGs were predominantly affiliated to Firmicutes such as Lactobacillus and Fastidiosipila. Furthermore, shifts in ARGs were significantly correlated with class 1 integrase gene (intI1), and structural equation models further revealed that intI1 gene contributed most (standardized total effect 0.92) to the ARGs-removal, which was trigged by horizontal gene transfer. Together these results suggest that the addition of zeolite and biochar mitigate the accumulation and spread of ARGs during composting, and the crucial role of horizontal gene transfer (HGT) on the behaviors of ARGs should pay more attention to in the future.

Soil acidification reduces the effects of short-term nutrient enrichment on plant and soil biota and their interactions in grasslands.

Soil nitrogen (N) and phosphorus (P) contents, and soil acidification have greatly increased in grassland ecosystems due to increased industrial and agricultural activities. As major environmental and economic concerns worldwide, nutrient enrichment and soil acidification can lead to substantial changes in the diversity and structure of plant and soil communities. Although the separate effects of N and P enrichment on soil food webs have been assessed across different ecosystems, the combined effects of N and P enrichment on multiple trophic levels in soil food webs have not been studied in semiarid grasslands experiencing soil acidification. Here we conducted a short-term N and P enrichment experiment in non-acidified and acidified soil in a semiarid grassland on the Mongolian Plateau. We found that net primary productivity was not affected by N or P enrichment alone in either non-acidified or acidified soil, but was increased by combined N and P enrichment in both non-acidified and acidified soil. Nutrient enrichment decreased the biomass of most microbial groups in non-acidified soil (the decrease tended to be greatest with combined N and P enrichment) but not in acidified soil, and did not affect most soil nematode variables in non-acidified or acidified soil. Nutrient enrichment also changed plant and microbial community structure in non-acidified but not in acidified soil, and had no effect on nematode community structure in non-acidified or acidified soil. These results indicate that the responses to short-term nutrient enrichment were weaker for higher trophic groups (nematodes) than for lower trophic groups (microorganisms) and primary producers (plants). The findings increase our understanding of the effects of nutrient enrichment on multiple trophic levels of soil food webs, and highlight that soil acidification, as an anthropogenic stressor, reduced the responses of plants and soil food webs to nutrient enrichment and weakened plant-soil interactions.

Application of a Combined Homogenate and Ultrasonic Cavitation System for the Efficient Extraction of Flavonoids from Cinnamomum camphora Leaves and Evaluation of Their Antioxidant Activity In Vitro.

A free-of-dust pollution extraction method combined-homogenate and ultrasonic cavitation system, namely, homogenate-combined ultrasonic cavitation synergistic extraction (HUCSE), was proposed for the efficient extraction of flavonoids from Cinnamomum camphora leaves. Response surface methodology of Box-Behnken design was employed to optimize the HUCSE process, and the optimum operation conditions attained with an extraction yield of 7.95 ± 0.27 mg/g were ethanol concentration 76%, homogenate/ultrasonic time 25 min, solvent-to-solid ratio 22 mL/g, and ultrasonic power 240 W. A second-order kinetic mathematical methodology was performed to depict the behaviors of HUCSE and heat reflux extraction method. The results suggested that the developed HUCSE is an efficient and green method for the extraction of C. camphora flavonoids or other plant natural products, where the obvious higher parameters of extraction capacity at saturation, second-order extraction rate constant, and original extraction rate were obtained when compared to the heat reflux method. The antioxidant activity assays in vitro showed that the C. camphora flavonoids possessed strong antioxidant activity and are promising to be applied as a natural alternative antioxidant.

Patterns and Drivers of Soil Respiration under Long-Term Citrus reticulate in Southern China.

Soil respiration (Rs) is a major source of carbon emission in terrestrial ecosystems. Despite the fact that the influence of land use practice on Rs has been widely studied, the patterns and drivers on Rs of Citrus reticulata cultivation, a worldwide land use practice are unclear. In this current study, we investigated the influence of long-term cultivation of Citrus reticulata (CO) and of CO intercropped with soybean (CB) on soil nutrients, water availability, and Rs in southern China. Results indicated that after 21 years of cultivation, CO and CB significantly increased total soil carbon (TC), total soil nitrogen (TN), and soil organic matter (OM) at 0-20 cm and 20-40 cm, both at upslope and downslope compared with bare soil (CK). However, soil moisture (SM), dissolved organic carbon (DOC), and microbial biomass carbon (MBC) decreased under CB. In addition, no significant variation was found in soil pH between CK, CO, and CB. Across incubation time (56 days), Rs decreased exponentially with incubation time and CB showed the highest Rs rate irrespective of soil depth or topography. Linear regression further showed TC and TN as the two major factors influencing Rs upslope, while DOC was the dominant factor in regulating Rs downslope. These findings demonstrated that long-term cultivation of citrus significantly changed soil nutrients, water availability, and Rs rate.

[Chemical composition and antibacterial activity of the essential oil from leaves of Chimonanthus grammatus].

The chemical composition of essential oil, which from the leaves of Chimonanthus grammatus obtained by hydrodistillation were analyzed by GC-MS, and their possible antibacterial properties were screened. According to the results from GC-MS analysis, fifty-three components comprising 99.99% of the essential oil were identified. The major components of essential oil were 3-(4, 8-dimethyl-3,7-nonadienyl)(E) -furan (13.1%), bornyl acetate (12.66%), and 6,6-dimethyl-3-methylene-bicyclo[3.1.1] heptane (7.06%), etc. Antibacterial activity of essential oil was employed by two complementary test systems of disc diffusion and MIC/ MBC tests, which showed obviously antibacterial activity against all of the tested bacteria.

[Effects of forest type on soil organic matter, microbial biomass, and enzyme activities].

Taking the typical forest types Pinus elliottii var. elliotttii, Araucaria cunninghamii, and Agathis australis in southern Queensland of Australia as test objects, an investigation was made on the soil soluble organic carbon (SOC) and nitrogen (SON), microbial biomass C (MBC) and N (MBN), and enzyme activities, aimed to understand the effects of forest type on soil quality. In the three forests, soil SOC content was 552-1154 mg kg(-1), soil SON content was 20.11-57.32 mg kg(-1), soil MBC was 42-149 mg kg(-1), soil MBN was 7-35 mg kg(-1), soil chitinase (CAS) activity was 2.96-7.63 microg g(-1) h(-1), soil leucine aminopeptidase (LAP) activity was 0.18-0.46 microg g(-1) d(-1), soil acid phosphatase (ACP) activity was 16.5-29.6 microg g(-1) h(-1), soil alkaline phosphatase (AKP) activity was 0.79-3.42 microg g(-1) h(-1), and soil beta-glucosidase (BG) activity was 3.71-9.93 microg g(-1) h(-1). There was a significant correlation between soil MBC and MBN. Soil SOC content and soil CAS and LAP activities decreased in the order of P. elliottii > A. cunninghamii > A. australis, soil SON content decreased in the order of A. cunninghamii > A. australis > P. elliottii and was significantly higher in A. cunninghamii than in P. elliottii forest (P < 0.05), soil MBC and MBN and AKP activity decreased in the order of A. australis > P. elliottii > A. cunninghamii, and soil ACP and BG activities decreased in the order of P. elliottii > A. australis > A. cunninghamii. Among the test soil biochemical factors, soil MBC, MBN, SON, and LAP had greater effects on the soil quality under the test forest types.