Differential Gene Expression Patterns in Peach Roots under Non-Uniform Soil Conditions in Response to Organic Matter.

Organic matter (OM) amendments are often encouraged in sustainable agriculture programs but can create heterogeneous soil environments when applied to perennial crops such as peaches (Prunus persica (L.) Batsch). To better understand the responses of peach roots to non-uniform soil conditions, transcriptomic analysis was performed in a split-root study using uniform soil (the same soil type for all roots) or non-uniform soil (different soil types for each half of the root system) from either (1) autoclaved sand (S), (2) autoclaved sand with autoclaved compost (A), or (3) autoclaved sand with compost which included inherent biological soil life (B). Each uniform soil type (S, A, and B) was grouped and compared by uniform and non-uniform soil comparisons for a total of nine treatments. Comparisons revealed peach roots had differentially expressed genes (DEGs) and gene ontology terms between soil groups, with the S and B groups having a range of 106-411 DEGs and the A group having a range of 19-94 DEGs. Additionally, six modules were identified and correlated (p > 0.69) for six of the nine treatment combinations. This study broadly highlights the complexity of how OM and biological life in the rhizosphere interact with immediate and distant roots and sheds light on how non-homogenous soil conditions can influence peach root gene expression.

Annual compost amendments can replace synthetic fertilizer, improve soil moisture, and ensure tree performance during peach orchard establishment in a humid subtropical climate.

The application of organic matter (OM) to peach orchards is currently uncommon in commercial operations but could potentially replace synthetic fertilizers and improve long-term orchard sustainability. The purpose of the study was to monitor how annual applications of compost to replace synthetic fertilizer would change soil quality, peach tree nutrient and water status, and tree performance during the first four years of orchard establishment within a subtropical climate. Food waste compost was incorporated before planting and added annually over four years with the following treatments: 1) 1x rate, applied as dry weight at 22,417 kg ha-1 (10 tons acre-1) incorporated during the first year and 11,208 kg ha-1 (5 tons acre-1) applied topically each year after; 2) 2x rate, applied as dry weight at 44,834 kg ha-1 (20 tons acre-1) incorporated during the first year and 22,417 kg ha-1 (10 tons acre-1) applied topically each year after; and 3) control, with no compost added. Treatments were applied to a virgin orchard location, where peach trees had never previously been grown, and to a replant location, where peach trees had been grown previously for more than 20 years. Synthetic fertilizer was reduced in the 1x and 2x rates by 80 and 100% during the spring and all treatments received the summer application according to standard practice. Soil OM, phosphorus and sodium all increased with the addition of 2x compost in the replant location at 15 cm depth, but not within the virgin location compared to the control treatment. The 2x rate of compost improved soil moisture during the growing season, but tree water status was similar between treatments. Tree growth was similar between treatments in the replant location, but the 2x treatment had larger trees compared to the control by the third year. Foliar nutrients were similar between treatments over the four years, while 2x compost rate increased fruit yield in the virgin location compared to the control the second year of harvest. The 2x food waste compost rate could be considered as a replacement for synthetic fertilizers and to potentially increase tree growth during orchard establishment.

Variable Fall Climate Conditions on Carbon Assimilation and Spring Phenology of Young Peach Trees.

Variable fall temperature and moisture conditions may alter leaf senescence of deciduous fruit trees, influencing carbon assimilation before dormancy and phenology the following spring. This study explored gas exchange of young peach trees (Prunus persica (L.) Batsch) when senescence proceeded normally or was delayed during the fall under two soil moisture treatments: Well-irrigated trees or water deficit. Results showed leaf carbon assimilation was similar between the senescence treatments, but whole tree assimilation was estimated to be greater in delayed senescence trees compared to normal senescence trees based on timing of defoliation and total leaf area. The effect of soil moisture on carbon assimilation was not consistent between years. Delayed sap flow and bloom time resulted as a consequence of delayed senescence the previous fall, but soil moisture did not affect spring phenology.

Variable Fall Climate Influences Nutrient Resorption and Reserve Storage in Young Peach Trees.

A delay of leaf senescence resulting from variable fall climate may allow for additional nutrient resorption, and storage within reserve organs. Autumn leaves and reserve organs (<1 year shoots, >1 year shoots, stem above and below the graft union, the tap root, and fine roots) during dormancy of young peach trees were evaluated following warmer fall temperatures and limited soil moisture on two cultivars ('Scarletprince' and 'Autumnprince' both on GuardianTM rootstock) over two seasons. Four treatments were established for the two cultivars: (1) well-watered trees (100% ETc needs) in ambient outdoor temperatures; (2) water deficient trees (50% ETc needs) in ambient outdoor temperatures; (3) well-watered trees grown within a greenhouse; and (4) water deficient trees within a greenhouse. The greenhouse environment was on average 5°C warmer than the ambient outdoor temperature. Senescence was delayed on greenhouse-grown trees both years with leaf number and area similar in the greenhouse and outdoor environments prior to senescence. Across leaf samples, leaf nitrogen and phosphorus concentrations were lower within delayed senescence tree leaves while potassium was lower in leaves experiencing normal senescence. During dormancy, multiple reserve organs showed higher nitrogen, phosphorus, and potassium in trees with delayed senescence than normal senescence and similar increases were observed in water-deficient trees compared to well-watered trees. Phosphorus and potassium concentrations were also higher in multiple reserve organs within 'Autumnprince' trees compared to 'Scarletprince' trees. This study suggests variable climate conditions of increased temperatures or reduced soil moisture during autumn resulting in delayed senescence influence the process of nutrient resorption and increase nutrient storage within reserve organs.

Investigation of Potential Causes of Peach Skin Streaking.

Peach skin streaking is a previously undescribed skin discoloration affecting red-blush peach cultivars in Georgia and South Carolina. Streaked peach fruit have been observed in the field close to harvest. The cause of streaking is still unknown but one hypothesis is that atmospheric pollutants may be involved. The goal of this study was to establish proof of concept that commonly found air pollutants can produce streaks on peach skin similar to those observed in commercial orchards and investigate the susceptibility of peach fruit during maturation. Common reactive byproducts of atmospheric pollutants, including sulfuric acid (H2SO4), nitric acid (HNO3), and hypochlorite acid (HCl), at concentrations up to 10 µg/ml did not produce streaking under field conditions when applied at week 3, 2, and 1 prior to commercial harvest. However, sodium hypochlorite (NaClO) in the form of Clorox solution and chlorine dioxide (ClO2) at 100 µg/ml generated from the Aquamira water treatment solution produced streaking symptoms on detached peach fruit under controlled conditions and in the field. Peach fruit were most susceptible to streaking closest to harvest, suggesting that NaClO and ClO2 interfere with pigment formation.

Setting good practices to assess the efficiency of iron fertilizers.

The most prevalent nutritional disorder in fruit tree crops growing in calcareous soils is Fe deficiency chlorosis. Iron-deficient, chlorotic tree orchards require Fe-fertilization, since chlorosis causes decreases in tree vegetative growth as well as fruit yield and quality losses. When assessing the effectiveness of Fe-fertilizers, it is necessary to use sound practices based in the state-of-the art knowledge on the physiology and biochemistry of Fe deficiency. This review provides an overview on how to carry out the assessment of the efficiency of Fe-fertilizers, discussing common errors found in the literature, outlining adequate procedures and giving real examples of practical studies carried out in our laboratory in the past decade. The review focuses on: i) the design of Fe-fertilization experiments, discussing several issues such as the convenience of using controlled conditions or field experiments, whether fertilizer assessment experiments should mimic usual fertilization practices, as well as aspects regarding product formulations, dosages, control references and number of replicates; ii) the assessment of chlorosis recovery upon Fe-fertilization by monitoring leaf chlorophyll, and iii) the analysis of the plant responses upon Fe-fertilization, discussing the phases of leaf chlorosis recovery and the control of other leaf nutritional parameters.

Antioxidant defences and oxidative damage in salt-treated olive plants under contrasting sunlight irradiance.

The interactive effects of root-zone salinity and sunlight on leaf biochemistry, with special emphasis on antioxidant defences, were analysed in Olea europaea L. cv. Allora, during the summer period. Plants were grown outside under 15% (shade plants) or 100% sunlight (sun plants) and supplied with 0 or 125 mM NaCl. The following measurements were performed: (1) the contribution of ions and soluble carbohydrates to osmotic potentials; (2) the photosystem II (PSII) photochemistry and the photosynthetic pigment concentration; (3) the concentration and the tissue-specific distribution of leaf flavonoids; (4) the activity of antioxidant enzymes; and (5) the leaf oxidative damage. The concentrations of Na(+) and Cl(-) were significantly greater in sun than in shade leaves, as also observed for the concentration of the 'antioxidant' sugar-alcohol mannitol. The de-epoxidation state of violaxanthin-cycle pigments increased in response to salinity stress in sun leaves. This finding agrees with a greater maximal PSII photochemistry (F(v)/F(m)) at midday, detected in salt-treated than in control plants, growing in full sunshine. By contrast, salt-treated plants in the shade suffered from midday depression in F(v)/F(m) to a greater degree than that observed in control plants. The high concentration of violaxanthin-cycle pigments in sun leaves suggests that zeaxanthin may protect the chloroplast from photo-oxidative damage, rather than dissipating excess excitation energy via non-photochemical quenching mechanisms. Dihydroxy B-ring-substituted flavonoid glycosides accumulate greatly in the mesophyll, not only in the epidermal cells, in response to high sunlight. The activity of antioxidant enzymes varied little because of sunlight irradiance, but declined sharply in response to high salinity in shade leaves. Interestingly, control and particularly salt-treated plants in the shade underwent greater oxidative damage than their sunny counterparts. These findings, which conform to the evolution of O. europaea in sunny environments, suggest that under partial shading, the antioxidant defence system may be ineffective to counter salt-induced oxidative damage.

Can elevated CO(2) improve salt tolerance in olive trees?

We compared growth, leaf gas exchange characteristics, water relations, chlorophyll fluorescence, and Na(+) and Cl(-) concentration of two cultivars ('Koroneiki' and 'Picual') of olive (Olea europaea L.) trees in response to high salinity (NaCl 100mM) and elevated CO(2) (eCO(2)) concentration (700microLL(-1)). The cultivar 'Koroneiki' is considered to be more salt sensitive than the relatively salt-tolerant 'Picual'. After 3 months of treatment, the 9-month-old cuttings of 'Koroneiki' had significantly greater shoot growth, and net CO(2) assimilation (A(CO(2))) at eCO(2) than at ambient CO(2), but this difference disappeared under salt stress. Growth and A(CO(2)) of 'Picual' did not respond to eCO(2) regardless of salinity treatment. Stomatal conductance (g(s)) and leaf transpiration were decreased at eCO(2) such that leaf water use efficiency (WUE) increased in both cultivars regardless of saline treatment. Salt stress increased leaf Na(+) and Cl(-) concentration, reduced growth and leaf osmotic potential, but increased leaf turgor compared with non-salinized control plants of both cultivars. Salinity decreased A(CO(2)), g(s), and WUE, but internal CO(2) concentrations in the mesophyll were not affected. eCO(2) increased the sensitivity of PSII and chlorophyll concentration to salinity. eCO(2) did not affect leaf or root Na(+) or Cl(-) concentrations in salt-tolerant 'Picual', but eCO(2) decreased leaf and root Na(+) concentration and root Cl(-) concentration in the more salt-sensitive 'Koroneiki'. Na(+) and Cl(-) accumulation was associated with the lower water use in 'Koroneiki' but not in 'Picual'. Although eCO(2) increased WUE in salinized leaves and decreased salt ion uptake in the relatively salt-tolerant 'Koroneiki', growth of these young olive trees was not affected by eCO(2).