Phenotypic variation and genome-wide association studies of main culm panicle node number, maximum node production rate, and degree-days to heading in rice.

BACKGROUND: Grain yield is a complex trait that results from interaction between underlying phenotypic traits and climatic, edaphic, and biotic variables. In rice, main culm panicle node number (MCPNN; the node number on which the panicle is borne) and maximum node production rate (MNPR; the number of leaves that emerge per degree-day > 10°C) are primary phenotypic plant traits that have significant positive direct effects on yield-related traits. Degree-days to heading (DDTH), which has a significant positive effect on grain yield, is influenced by the interaction between MCPNN and MNPR. The objective of this research is to assess the phenotypic variation of MCPNN, MNPR, and DDTH in a panel of diverse rice accessions, determine regions in the rice genome associated with these traits using genome-wide association studies (GWAS), and identify putative candidate genes that control these traits. RESULTS: Considerable variation was observed for the three traits in a 220-genotype diverse rice population. MCPNN ranged from 8.1 to 20.9 nodes in 2018 and from 9.9 to 21.0 nodes in 2019. MNPR ranged from 0.0097 to 0.0214 nodes/degree day > 10°C in 2018 and from 0.0108 to 0.0193 nodes/degree-day > 10°C in 2019. DDTH ranged from 713 to 2,345 degree-days > 10°C in 2018 and from 778 to 2,404 degree-days > 10°C in 2019. Thirteen significant (P < 2.91 x 10-7) trait-single nucleotide polymorphism (SNP) associations were identified using the multilocus mixed linear model for GWAS. Significant associations between MCPNN and three SNPs in chromosome 2 (S02_12032235, S02_11971745, and S02_12030176) were detected with both the 2018 and best linear unbiased prediction (BLUP) datasets. Nine SNPs in chromosome 6 (S06_1970442, S06_2310856, S06_2550351, S06_1968653, S06_2296852, S06_1968680, S06_1968681, S06_1970597, and S06_1970602) were significantly associated with MNPR in the 2019 dataset. One SNP in chromosome 11 (S11_29358169) was significantly associated with the DDTH in the BLUP dataset. CONCLUSIONS: This study identifies SNP markers that are putatively associated with MCPNN, MNPR, and DDTH. Some of these SNPs were located within or near gene models, which identify possible candidate genes involved in these traits. Validation of the putative candidate genes through expression and gene editing analyses are necessary to confirm their roles in regulating MCPNN, MNPR, and DDTH. Identifying the underlying genetic basis for primary phenotypic traits MCPNN and MNPR could lead to the development of fast and efficient approaches for their estimation, such as marker-assisted selection and gene editing, which is essential in increasing breeding efficiency and enhancing grain yield in rice. On the other hand, DDTH is a resultant variable that is highly affected by nitrogen and water management, plant density, and several other factors.

Tromboelastografía para cirugía general / Thromboelastography for general surgery

Resumen: Las pruebas convencionales de coagulación evalúan el tiempo en que los factores de coagulación se activan en el plasma sanguíneo, el cual carece de componentes celulares, como enzimas y plaquetas que intervienen en el desarrollo de la hemostasia. La tromboelastografía (TEG) realiza un análisis in vitro de la relación entre plaquetas, enzimas, fibrinógeno y otros elementos de la coagulación de manera integral; por lo que se utiliza con mayor frecuencia en cirugías cardíacas, trasplantes y cirugías de malformaciones arteriovenosas, donde la pérdida sanguínea esperada es mayor a 40% del volumen sanguíneo circulante. La inclusión de la TEG en la valoración preanestésica permite evaluar la actividad plaquetaria en los pacientes que utilizan antiagregantes, como clopidogrel o ácido acetilsalicílico, a través del mapeo plaquetario (Platelet Mapping®). Cuando se presenta hemorragia en el período transanestésico, la TEG permite identificar de manera específica el tipo de tratamiento necesario para mejorar la coagulación o la transfusión de elementos formes de la sangre. La TEG permite realizar protocolos más sofisticados de terapia transfusional, lo que implica una disminución de las complicaciones asociadas con la politransfusión y, por ende, la disminución de costos, por lo que estos beneficios justifican el uso rutinario de la TEG para cualquier cirugía general.

Abstract: Conventional coagulation tests evaluate the time in which the coagulation factors are activated in the blood plasma, which lacks cellular components such as enzymes and platelets that are involved in the development of hemostasis. Thromboelastography (TEG) performs an in vitro analysis of the relationship between platelets, enzymes, fibrinogen, and other coagulation elements in an integral way; reason why it is used more frequently in cardiac surgeries, transplants, and surgeries of arteriovenous malformations, where the expected blood loss is greater than 40% of the circulating blood volume. The inclusion of TEG in the pre-anesthetic evaluation allows evaluating platelet activity in patients who use antiplatelets therapy, such as clopidogrel or acetylsalicylic acid, through platelet mapping (Platelet Mapping®). When bleeding occurs in the trans-anesthetic period, TEG specifically identifies the type of treatment necessary to improve coagulation or transfusion of formed blood elements. The TEG allows more sophisticated transfusion therapy protocols to be carried out, which implies a decrease in complications associated with polytransfusion and a reduction in costs, so these benefits justify the routine use of TEG for any general surgery.

Homology-based identification of candidate genes for male sterility editing in upland cotton (Gossypium hirsutum L.).

Upland cotton (Gossypium hirsutum L.) accounts for more than 90% of the world's cotton production, providing natural material for the textile and oilseed industries worldwide. One strategy for improving upland cotton yields is through increased adoption of hybrids; however, emasculation of cotton flowers is incredibly time-consuming and genetic sources of cotton male sterility are limited. Here we review the known biochemical modes of plant nuclear male sterility (NMS), often known as plant genetic male sterility (GMS), and characterized them into four groups: transcriptional regulation, splicing, fatty acid transport and processing, and sugar transport and processing. We have explored protein sequence homology from 30 GMS genes of three monocots (maize, rice, and wheat) and three dicots (Arabidopsis, soybean, and tomato). We have analyzed evolutionary relationships between monocot and dicot GMS genes to describe the relative similarity and relatedness of these genes identified. Five were lowly conserved to their source species, four unique to monocots, five unique to dicots, 14 highly conserved among all species, and two in the other category. Using this source, we have identified 23 potential candidate genes within the upland cotton genome for the development of new male sterile germplasm to be used in hybrid cotton breeding. Combining homology-based studies with genome editing may allow for the discovery and validation of GMS genes that previously had no diversity observed in cotton and may allow for development of a desirable male sterile mutant to be used in hybrid cotton production.

A newly optimized protocol to extract high-quality hemolymph from the cattle tick Rhipicephalus microplus: Improving the old conditions.

Ticks are hematophagous ectoparasites with importance to animal and human health. In recent years, the study of ticks has had significant development, including immune response, vector-host interactions, physiological and multi-omics approaches. However, one of the main impediments is obtaining a significant amount of high-quality hemolymph. For this reason, we developed a protocol that allows obtaining up to 100 µl of hemolymph free of host blood per engorged tick. The technique consists of continuous hipocuticular punctures of the tick dorsum and an anticoagulant buffer that impedes hemolymph coagulation, allowing constant extravasation and ensuring high yields. Additionally, the hemocytes recovered with this protocol are intact and can be used for further analysis. The high-quality hemolymph obtained using this protocol and its applications will help to better understand the processes involving the hemolymph and its components. Although there are other hemolymph extraction protocols, the method developed here is very well suited for Rhipicephalus microplus, and in our experience, results in better yields and high-quality samples.

Comparison of growth and psychomotor development in daycare centers attended by professionals.

BACKGROUND: Growth and development reflect the child's health condition. Currently, child care is supported in daycare centers. In this context, this article aimed to identify the differences in growth and psychomotor development in children according to their attendance at daycare centers. METHODS: We conducted an analytical cross-sectional study in children aged 25 to 48 months. Two groups were identified: 68 children attended daycare, and 68 children did not attend daycare. Growth was assessed with weight-for-height curves, and psychomotor development was evaluated with the child developmental assessment instrument (psychosocial, language, psychomotor, and cognitive area). The X2 test was used for statistical analysis. RESULTS: The percentage of daycare children with ideal weight was higher than those not attending in daycare (p = 0.035). Psychomotor development was significantly higher in daycare children: in the psychosocial (p = 0.000), language (p = 0.000), motor (p = 0.000), and cognitive development (p = 0.000) areas. CONCLUSIONS: The psychomotor development of children attending daycare centers is superior to that of children not in daycare centers.

INTRODUCCIÓN: La salud del niño se puede evaluar a partir de su crecimiento y desarrollo. En la sociedad actual, el cuidado de los hijos se comparte con las guarderías infantiles. En este contexto, el objetivo del artículo fue identificar las diferencias de crecimiento y desarrollo psicomotor en niños de acuerdo con su asistencia a las guarderías. MÉTODOS: Se llevó a cabo un estudio transversal analítico en niños de 25 a 48 meses de edad. Se identificaron dos grupos: 68 niños atendidos en guarderías y 68 niños no atendidos en guarderías. El crecimiento se evaluó con las curvas de peso para la talla y el desarrollo psicomotor, con el instrumento de evaluación del desarrollo del niño (área psicosocial, lenguaje, psicomotriz, y cognitiva). Se utilizó la prueba de X2 para el análisis estadístico. RESULTADOS: El porcentaje de niños de guardería con peso ideal es superior al de los no atendidos en guardería (p = 0.035). El desarrollo psicomotor es significativamente mayor en los niños de guardería: en el área psicosocial (p = 0.000), en lenguaje (p = 0.000), en el área motriz (p = 0.000) y en desarrollo cognitivo (p = 0.000). CONCLUSIONES: El desarrollo psicomotor de los niños atendidos en guardería es superior al de los niños no atendidos en guardería.

Tick Immunobiology and Extracellular Traps: An Integrative Vision to Control of Vectors.

Ticks are hematophagous ectoparasites that infest a diverse number of vertebrate hosts. The tick immunobiology plays a significant role in establishing and transmitting many pathogens to their hosts. To control tick infestations, the acaricide application is a commonly used method with severe environmental consequences and the selection of tick-resistant populations. With these drawbacks, new tick control methods need to be developed, and the immune system of ticks contains a plethora of potential candidates for vaccine design. Additionally, tick immunity is based on an orchestrated action of humoral and cellular immune responses. Therefore, the actors of these responses are the object of our study in this review since they are new targets in anti-tick vaccine design. We present their role in the immune response that positions them as feasible targets that can be blocked, inhibited, interfered with, and overexpressed, and then elucidate a new method to control tick infestations through the development of vaccines. We also propose Extracellular Traps Formation (ETosis) in ticks as a process to eliminate their natural enemies and those pathogens they transmit (vectorial capacity), which results attractive since they are a source of acting molecules with potential use as vaccines.

Guarderías infantiles. Crecimiento y desarrollo del niño / Childcare center. Child growth and development

Introducción: la incorporación de la mujer a la planta productiva ha modificado los patrones de atención y cuidado de los hijos. Objetivo: determinar el efecto de la guardería en el crecimiento y desarrollo del niño. Metodología: diseño de cohorte antes y después en niños atendidos en guarderías; la fuente de información fue el expediente clínico que genera de manera cotidiana el personal encargado de la atención del niño. Grupo no expuesto: niños al ingresar a la guardería (43 días a 24 meses de edad); grupo expuesto: los mismos niños al salir de la guardería (31 meses a 48 meses de edad). La exposición incluyó programas de alimentación y pedagogía para estimular el desarrollo psicosocial, lingüístico, motriz y cognitivo. El tamaño de la muestra fue de 154 expedientes. Se realizó la valoración del estado nutricional (Organización Mundial de la Salud, peso para la talla) y de desarrollo psicosocial (Evaluación del Desarrollo del Niño), lingüístico, motriz y cognitivo. Se utilizaron t pareada, Wilcoxon y McNemar. Resultados: el estado nutricional no se modificó (p = 0.837). El desarrollo al egreso fue estadísticamente significativo en las áreas psicosocial (p = 0.000), lingüística (p = 0.000), motriz (p = 0.000) y cognitiva (p = 0.000). Conclusión: el niño atendido en guardería sometido a programas para el desarrollo tiene alta probabilidad de evolucionar de manera favorable en las áreas psicosocial, lingüística, motriz y cognitiva.

Introduction: The incorporation of women into the economcally active sector has changed the patterns of children development and childcare. Objective: Determine the impact that a childcare center may have on the growth and development of children. Methods: Before and after cohort design in childcare center, using the information gathered in the clinical file, by personnel in charge of watching the children. Unexposed group, children upon entering the childcare center (from 43 days to 24 months of age); exposed group, the same children after leaving the childcare center (from 31 months to 48 months of age). Intervention included feeding and pedagogical program to stimulate psychosocial, language, motor and cognitive development. The sample size was 154 files. Assessment of nutritional status (World Health Organization tables for weight for height) and psychosocial, language, motor and cognitive development (Child Development Assessment instrument) was performed.Paired t, Wilcoxon and McNemar were used. Results: Nutritional condition was not modified (p = 0.837). After visiting the childcare center, the development of children was statistically significant in the psychosocial (p = 0.000), language (p = 0.000), motor (p = 0.000) and cognitive (p = 0.000) areas. Conclusion: The children in childcare centers undergoing a program of development, evolve favorably in the psychoso-cial, language, motor, and cognitive areas.

Biomarkers as predictors of renal damage in neonates undergoing cardiac surgery.

BACKGROUND: Acute Kidney Injury is a complication in children with heart disease undergoing cardiac surgery with cardiopulmonary bypass. The aim of this study is to describe the behavior of KIM-1 (Kidney Injury Molecule) and NGAL (Neutrophil Gelatinase Associated Lipocalin) as early predictors of renal damage, comparing them with serum creatinine and creatinine clearance, in neonates undergoing cardiac surgery. METHODS: Twenty-one (21) neonates, under 4 kg, with complex congenital heart diseases, RACHS-1 > 3, without preoperative renal failure, were studied. Serum creatinine and creatinine clearance were measured preoperatively and at 24, 48, 72, 96 hours postoperatively. Urinary samples of KIM-1(pg/ml) and NGAL (ng/ml) were collected after induction of anesthesia at 24 and 48 hours post-operatively. RESULTS: nRIFLE criteria were used to divide cohorts in "NO AKI" (12 patients) and "AKI" (nine patients). In the AKI group, serum creatinine increased significantly and creatinine clearance decreased significantly at 24, 48, and 72 hours compared with their respective baseline values. There was no difference in KIM-1 and NGAL values between patients who developed AKI and those who did not at any measured time. CONCLUSIONS: The deterioration of renal function continues to be one of the most frequent complications in this population. In our study, biomarkers did not show any correlation with the appearance of AKI. It remains to be seen whether this behavior of the biomarkers is linked with the non-consistent release of these types of molecules in immature kidneys. It is likely that a larger panel of biomarkers together with other glomerular filtration rate assessment methods will provide more information about AKI diagnosis.

An improved 7K SNP array, the C7AIR, provides a wealth of validated SNP markers for rice breeding and genetics studies.

Single nucleotide polymorphisms (SNPs) are highly abundant, amendable to high-throughput genotyping, and useful for a number of breeding and genetics applications in crops. SNP frequencies vary depending on the species and populations under study, and therefore target SNPs need to be carefully selected to be informative for each application. While multiple SNP genotyping systems are available for rice (Oryza sativa L. and its relatives), they vary in their informativeness, cost, marker density, speed, flexibility, and data quality. In this study, we report the development and performance of the Cornell-IR LD Rice Array (C7AIR), a second-generation SNP array containing 7,098 markers that improves upon the previously released C6AIR. The C7AIR is designed to detect genome-wide polymorphisms within and between subpopulations of O. sativa, as well as O. glaberrima, O. rufipogon and O. nivara. The C7AIR combines top-performing SNPs from several previous rice arrays, including 4,007 SNPs from the C6AIR, 2,056 SNPs from the High Density Rice Array (HDRA), 910 SNPs from the 384-SNP GoldenGate sets, 189 SNPs from the 44K array selected to add information content for elite U.S. tropical japonica rice varieties, and 8 trait-specific SNPs. To demonstrate its utility, we carried out a genome-wide association analysis for plant height, employing the C7AIR across a diversity panel of 189 rice accessions and identified 20 QTLs contributing to plant height. The C7AIR SNP chip has so far been used for genotyping >10,000 rice samples. It successfully differentiates the five subpopulations of Oryza sativa, identifies introgressions from wild and exotic relatives, and is useful for quantitative trait loci (QTL) and association mapping in diverse materials. Moreover, data from the C7AIR provides valuable information that can be used to select informative and reliable SNP markers for conversion to lower-cost genotyping platforms for genomic selection and other downstream applications in breeding.

Prenatal Testosterone Exposure Disrupts Insulin Secretion And Promotes Insulin Resistance.

Hyperandrogenemia and metabolic disturbances during postnatal life are strongly linked both to polycystic ovary syndrome and other conditions that arise from prenatal exposure to androgen excess. In an animal model of this condition, we reported that insulin sensitivity (IS) was lower in young female sheep born to testosterone-treated mothers versus sheep born to non-exposed mothers (control). This lower insulin sensitivity remains throughout reproductive life. However, it is unknown whether abnormal postnatal levels of testosterone (T) further decrease IS derived from prenatal exposure to testosterone. Therefore, we assessed the effects of an acute testosterone administration (40 mg) on IS and insulin secretion during an intravenous glucose tolerance test performed at 40 weeks of age (adulthood) in previously ovariectomized sheep at 26 weeks of age (prepuberty), that were either prenatally exposed to testosterone (T-females, n = 6) or not (C-females, n = 6). The incremental area under the curve of insulin was greater in C-females both with or without the acute testosterone treatment (P < 0.05). The ISI-Composite was lower after an acute testosterone treatment, only in T-females. We conclude that prenatal exposure to testosterone disrupts pancreatic insulin secretion in response to glucose and that in this setting further hyperandrogenemia may predispose to lower insulin sensitivity.

Síntomas en niños con cáncer y estrategias de cuidado familiar / Symptoms of cancer in children and family care strategies / Sintomas em crianças com câncer e estratégias de cuidado familiar

Resumen Introducción Los síntomas de dolor y náusea vómito en los niños con cáncer son ocasionados por la enfermedad o tratamiento de quimioterapia. El manejo de estos síntomas es un reto en los familiares. Objetivos Describir y analizar la relación entre los síntomas de dolor y náusea vómito en los niños con cáncer y describir las estrategias de cuidado familiar ante estos síntomas. Materiales y Métodos Estudio descriptivo correlacional, con muestra de 31 niños y familiares de una clínica oncopediatrica de Veracruz México. Diligenciaron los instrumentos Escala de dolor con caras-Revisada, Clasificación de Náusea-Vómito Inducido por Quimioterapia y Cuestionario de estrategias de cuidado familiar para el manejo de síntomas. Los datos se analizaron con estadística descriptiva e inferencial con Rho de Spearman, utilizando el programa SPSS 20.0. Resultados Los niños padecen dolor moderado (48%), leve (29%) e intenso (23%). Tienen náusea-vómito agudo (74%), anticipatorio (16%) y retardado (10%). Existe asociación entre la náusea-vómito retardado con el anticipatorio (r =435<0,05). Los familiares contrarrestan el dolor del niño con estrategias de espiritualidad, distracción y fármacos. Ante la náusea-vómito evitan ambientes con olor a comida y consumo de líquidos calientes. Discusión: Según el tipo de cáncer y tratamiento, es la intensidad del dolor en el niño. La náusea-vómito se considera el síntoma más problemático durante la quimioterapia. Conclusiones La investigación aporta datos científicos para indagar a futuro estos síntomas y posibles secuelas físicas y psicológicas (depresión, ansiedad) en los niños con cáncer, así como la efectividad de las estrategias familiares para tratar estos síntomas.

Abstract Introduction Pain and nausea/vomiting symptoms in children with cancer are provoked by the disease or chemotherapy treatment. Managing these symptoms is a challenge for families. Purposes To describe and analyze the relationship of pain and nausea/vomiting symptoms in children with cancer and to describe the family care strategies for these symptoms. Materials and Methods A descriptive correlational study was conducted with a sample of 31 children and their families from an oncopediatric hospital in Veracruz, Mexico. Instruments such as Face pain scale - revised, chemotherapy-induced nausea-vomiting classification and questionnaire of family care strategies for symptom management were filled out. Data were analyzed using descriptive and inferential statistics using Spearman Rho correlation and SPSS 20.0 software. Results Children reported moderate pain in 48%, mild pain in 29% and severe pain in 23%. Acute nausea-vomiting was reported in 74%, anticipatory nausea-vomiting in 16% and delayed nausea-vomiting in 10%. There is an association between delayed nausea-vomiting and the anticipatory (r =435<0.05). Families alleviate pain in children using spiritual strategies, diversion and drugs. In the event of nausea and vomiting, they avoid food-related odor environments and hot beverage consumption. Discussion The intensity of pain in the child depends on the cancer type and treatment. Nausea-vomiting is considered the most troublesome symptom during chemotherapy. Conclusions Research brings scientific data to study these symptoms and future possible physical and psychological sequels (depression, anxiety, etc.) in children with cancer, as well as the effectiveness of family strategies to manage these symptoms.

Resumo Introdução Os sintomas de dor, náuseas e vómito em crianças com câncer são causados pela doença ou pelos tratamentos de quimioterapia. O manejo desses sintomas é um desafio para os familiares. Objetivos Descrever e analisar a relação entre os sintomas de dor, náuseas e vómito nas crianças com câncer e descrever as estratégias de cuidado familiar diante destes sintomas. Materiais e Métodos Estudo descritivo correlacional, com uma amostra de 31 crianças e familiares de uma clínica onco-pediátrica de Veracruz, México. Preencheram os instrumentos Escala de dor com caras - Revisada, Classificação de Náusea-Vómito Induzido por Quimioterapia e Questionário de estratégias de cuidado familiar para o manejo dos sintomas. Os dados foram analisados com estatística descritiva e inferencial com Rho de Spearman, utilizando o programa SPSS 20.0. Resultados As crianças sofrem dor moderada (48%), leve (29%) e intensa (23%). Sentem náusea-vómito agudo (74%), antecipatório (16%) e retardado (10%). Existe associação entre a náusea-vómito retardado com o antecipatório (r =435<0,05). Os familiares combatem a dor da criança com estratégias de espiritualidade, distração e fármacos. Diante da náusea-vómito evitam ambientes com cheiro a comida e a ingesta de líquidos quentes. Discussão: O tipo de câncer e tratamento determina a intensidade da dor na criança. A náusea-vómito é considerado o sintoma mais problemático durante a quimioterapia. Conclusões A pesquisa fornece dados científicos para indagar sobre estes sintomas e as possíveis sequelas físicas e psicológicas no futuro (depressão, ansiedade) nas crianças com câncer, bem como a efetividade das estratégias familiares para o tratamento desses sintomas.

Population Pharmacokinetics and Pharmacodynamics of Dexmedetomidine in Children Undergoing Ambulatory Surgery.

BACKGROUND: Dexmedetomidine (DEX) is an α-2 adrenergic agonist with sedative and analgesic properties. Although not approved for pediatric use by the Food and Drug Administration, DEX is increasingly used in pediatric anesthesia and critical care. However, very limited information is available regarding the pharmacokinetics of DEX in children. The aim of this study was to investigate DEX pharmacokinetics and pharmacodynamics (PK-PD) in Mexican children 2-18 years of age who were undergoing outpatient surgical procedures. METHODS: Thirty children 2-18 years of age with American Society of Anesthesiologists physical status score of I/II were enrolled in this study. DEX (0.7 µg/kg) was administered as a single-dose intravenous infusion. Venous blood samples were collected, and plasma DEX concentrations were analyzed with a combination of high-performance liquid chromatography and electrospray ionization-tandem mass spectrometry. Population PK-PD models were constructed using the Monolix program. RESULTS: A 2-compartment model adequately described the concentration-time relationship. The parameters were standardized for a body weight of 70 kg by using an allometric model. Population parameters estimates were as follows: mean (between-subject variability): clearance (Cl) (L/h × 70 kg) = 20.8 (27%); central volume of distribution (V1) (L × 70 kg) = 21.9 (20%); peripheral volume of distribution (V2) (L × 70 kg) = 81.2 (21%); and intercompartmental clearance (Q) (L/h × 70 kg) = 75.8 (25%). The PK-PD model predicted a maximum mean arterial blood pressure reduction of 45% with an IC50 of 0.501 ng/ml, and a maximum heart rate reduction of 28.9% with an IC50 of 0.552 ng/ml. CONCLUSIONS: Our results suggest that in Mexican children 2-18 years of age with American Society of Anesthesiologists score of I/II, the DEX dose should be adjusted in accordance with lower DEX clearance.

Analysis of the concordance between the estimated values of creatinine clearance using the Cockcroft-Gault equation and the real value determined in patients from the Hospital Clínica Bíblica.

OBJECTIVE: to analyze the effect of the modifications in the Cockcroft-Gault equation for creatinine clearance rate determination (CrCl) and its concordance with the real value determined from 24-hours urine collection in a sample of Latin American patients hospitalized in San José de Costa Rica. METHOD: an observational, retrospective study, with patients submitted to a 24-hour urine collection test, and who met the inclusion criteria. The real and estimated values of creatinine clearance were determined, and their concordance was measured by applying the Intraclass Correlation Coefficient; a descriptive analysis of data was also conducted. RESULTS: there were 507 subjects (61% men); their age was described (ME = 60 years SD = 17 years), as well as their height (ME = 1.66 m SD = 0.09 m), current weight (ME =75 kg SD = 15 kg), body mass index (ME = 27.3 kg/m2 SD = 4.76 kg/m2) and endogenous creatinine clearance rates (ME = 69.72 ml/min SD = 33 ml/min). The best concordance with the equation was obtained with current weight values and serum creatinine without rounding. CONCLUSIONS: the application of the Cockcroft-Gault equation that matches more closely the real value is the one that uses current weight and does not round creatinine values below 1 mg/dL. It is suggested to conduct a prospective analysis, determining other variables that could affect CrCl real measures, and to replicate this methodology in specific populations. *ME: Mean **SD: Standard Deviation.

Objetivo: analizar el efecto de las modificaciones en la fórmula de Cockcroft-Gault en la medición del aclaramiento de creatinina (CrCl) y su concordancia con el valor real calculado con la orina de 24 horas en una muestra de pacientes latinoamericanos hospitalizados en San José de Costa Rica. Método: estudio observacional, retrospectivo, con pacientes en quienes se midió la creatinina sérica en orina de 24 horas y que cumplieran los criterios de inclusión. Se determinaron los valores de aclaramiento de creatinina reales y calculados, y se estableció la concordancia entre estos, aplicando la prueba del Coeficiente de Correlación Intraclase; se realizó un análisis descriptivo de los datos. Resultados: un total de 507 pacientes (61% hombres), de los cuales se describió la edad (*ME = 60 años**DE = 17 años), estatura (*ME = 1,66 metros**DE = 0,09 metros), peso actual (*ME = 75 kg **DE = 15 kg), índice de masa corporal (*ME = 27,3 Kg/m2**DE = 4,76 Kg/m2), y valores de aclaramiento endógeno (*ME = 69,72 ml/min **DE = 33 ml/min). Se obtuvo la mejor concordancia para la fórmula con valores de peso actual y creatinina sérica sin redondeo. Conclusiones: la aplicación de la fórmula de Cockcroft-Gault que mejor concuerda con el valor real es aquella que utiliza el peso actual y no redondea valores de creatinina inferiores a 1 mg/dL. Se sugiere realizar un análisis prospectivo, determinando otras variables que podrían afectar a la medición real del CrCl, y replicar la metodología en poblaciones específicas. *ME: Media **DE: Desviación Estándar.

Complete Genome Sequence of Nonhemolytic Streptococcus agalactiae Serotype V Strain 1, Isolated from the Buccal Cavity of a Canine.

The complete genome sequence from a nonhemolytic strain of Streptococcus agalactiae from the oral cavity of a canine was assembled. The genome is 2,165,968 bp, contains 2,055 genes, and is classified as group B streptococcus (GBS) serotype V, strain 1. A comparison to other S. agalactiae sequences shows high gene synteny with human and bovine strains.

Identification of a new marine algal species Pyropia nitida sp. nov. (Bangiales: Rhodophyta) from Monterey, California.

An unidentified marine red algal species classified in Pyropia J. Agardh was discovered from Monterey, CA. Morphological, barcode, and complete mitochondrial genome analysis of the alga support its recognition as a new species, Pyropia nitida sp. nov. The species is a high-intertidal, winter annual that is lanceolate in shape, monostromatic, and dioecious. Based on CO1 sequences, P. nitida is closely allied with the P. nereocystis clade. The mitogenome of P. nitida is 35 313 bp in length and contains 53 genes, including two ribosomal RNAs, 24 transfer RNAs, four ribosomal proteins, two ymfs, four ORFs, and 17 genes involved in electron transport and oxidative phosphorylation. The results support the recognition of P. nitida as distinct from the morphologically similar P. lanceolata.

[Etiologic and antibiotic susceptibility profile of the first episode of febrile urinary tract infection]. / Perfil etiológico y susceptibilidad antimicrobiana del primer episodio de infección urinaria febril.

BACKGROUND: Urinary tract infection (UTI) is a common infection in childhood; its diagnosis involves performing a urine culture. AIM: To describe the etiology and bacterial susceptibility of the first episode of UTI in children presenting with fever to the emergency room. PATIENTS AND METHODS: One hundred and five children (2 months -5 years old) seen at the Hospital Dr. Sotero del Rio in Santiago, between November 2009 and November 2010 were evaluated. A urine specimen was obtained by transurethral catheterization. Urine was cultured and microorganisms were identified and tested for antimicrobial susceptibility. RESULTS: 76.2% (80) of patients were women and 80% (84) were under 18 months. Urine sediment was abnormal in 82.5%. The most frequently isolated microorganism was Escherichia coli (96.1%) showing high susceptibility to aminoglycosides (near 100%), third generation cephalosporins, ciprofloxacin and nitrofurantoin; and low susceptibility to cephalothin (69%) and trimethoprim/sulfamethoxazole (66%). We found one ESBL-producing strain. CONCLUSION: The most common uropathogen was E. coli with good in vitro susceptibility to aminoglycosides and third generation cephalosporins, which are the recommended initial empirical therapy. E. coli ESBL-producing strains appear as emerging pathogens in community acquired UTIs in children.

Perfil etiológico y susceptibilidad antimicrobiana del primer episodio de infección urinaria febril / Etiologic and antibiotic susceptibility profile of the first episode of febrile urinary tract infection

Urinary tract infection (UTI) is a common infection in childhood; its diagnosis involves performing a urine culture. Aim: To describe the etiology and bacterial susceptibility of the first episode of UTI in children presenting with fever to the emergency room. Patients and Methods : One hundred and five children (2 months -5 years old) seen at the Hospital Dr. Sotero del Rio in Santiago, between November 2009 and November 2010 were evaluated. A urine specimen was obtained by transurethral catheterization. Urine was cultured and microorganisms were identified and tested for antimicrobial susceptibility. Results: 76.2% (80) of patients were women and 80% (84) were under 18 months. Urine sediment was abnormal in 82.5%. The most frequently isolated microorganism was Escherichia coli (96.1%) showing high susceptibility to aminoglycosides (near 100%), third generation cephalosporins, ciprofloxacin and nitrofurantoin; and low susceptibility to cephalothin (69%) and trimethoprim/sulfamethoxazole (66%). We found one ESBL-producing strain. Conclusion: The most common uropathogen was E. coli with good in vitro susceptibility to aminoglycosides and third generation cephalosporins, which are the recommended initial empirical therapy. E. coli ESBL-producing strains appear as emerging pathogens in community acquired UTIs in children.

La infección del tracto urinario (ITU) es muy frecuente en la niñez y su diagnóstico implica la realización de urocultivo. Objetivo: Describir la etiología y susceptibilidad bacteriana del primer episodio de ITU en niños que consultaron por fiebre en una unidad de emergencia. PacientesyMétodos: Se evaluaron 105 niños (2 meses -5 años) consultantes en la Unidad de Emergencia Infantil del Hospital Sótero del Río del área sur-oriente de Santiago entre noviembre de 2009 y noviembre de 2010, con muestra de orina tomada por cateterismo trans-uretral para sedimento de orina, urocultivo y antibiograma. Resultados: El 76,2% (80) de los pacientes fueron mujeres y 80% (84) tenía menos de 18 meses. El sedimento de orina resultó alterado en 82,5%. El microorganismo aislado con mayor frecuencia fue Escherichia coli (96,1%) que mostró buena susceptibilidad in vitro (cercana a 100%) para aminoglucósidos, cefalosporinas de tercera generación, quinolonas y nitrofurantoína, y baja susceptibilidad para cefalotina (69%) y cotrimoxazol (66%). Una cepa era productora de β-lactamasa de expectro extendido (bLEE). Conclusión: El uropatógeno más frecuente fue E. coli que demostró buena susceptibilidad in vitro a aminoglucósidos y cefalosporinas de tercera generación, antimicrobianos parenterales recomendados como tratamiento empírico inicial para este grupo de pacientes. Las cepas de E. coli productoras de bLEE aparecen como patógenos emergentes en las ITUs adquiridas por niños en la comunidad.

Medición y caracterización de factores familiares, individuales, ambientales en consumo y no consumo de drogas en adolescentes / Measurement and characterization of factors related to the family, the individual and the environment, in the consumption and non-consumption of drugs by adolescents

Objetivo. Medir y caracterizar factores familiares, individuales y ambientales en el consumo y no consumo de drogas, en adolescentes hombres y mujeres escolarizados, de Minatitlán, Veracruz México. Materiales y métodos. Estudio cuantitativo descriptivo, con metodología de Diseño de Bloques Incompletos Balanceados, aplicado en una muestra de 720 adolescentes. Utilizando instrumentos con propiedades psicométricas para México. Se utilizó el modelo de Rasch para obtener instrumentos ajustados y fiables para caracterizar hombres y mujeres consumidores y no consumidores de drogas, en cada uno de los factores medidos, con el estadístico t de student de muestras independientes. El análisis colectivo fue través del anclaje de los instrumentos. Resultados. Los adolescentes inician el consumo de drogas legales a los 12 años de edad y el consumo de drogas ilegales a los 13 años. Los adolecentes se caracterizaron hacia el bajo riesgo en los factores familiares, individuales y ambientales. Sin embargo, los consumidores de drogas hombres y mujeres, tienen mayor riesgo que los no consumidores. Se derivó un instrumento para medir a futuro factores familiares individuales y ambientales para el consumo y no consumo de drogas en adolescentes en Minatitlán. Conclusiones. La caracterización del consumo y no consumo de drogas aporta conocimiento para enfermería, desde lo teórico y la medición. Señala la importancia de enfermería en la gestión política, social, administrativa, para la demanda del consumo de drogas. Es referente para la enfermería escolar y familiar, en programas preventivos dirigidos a los factores detectados en hombres y mujeres. Por último, proporciona base teórica para futuras investigaciones para enfermería.

Objective. To measure and characterize factors related to the family, the individual and the environment in the consumption and non-consumption of drugs by male and female adolescents enrolled in schools in Minatitlan, Veracruz, Mexico. Materials and methods. Quantitative descriptive study, using the Balanced Incomplete Block Design method, applied to a sample of 720 adolescents, and instruments with psychometric properties adapted to Mexico. The Rasch method was used to develop instruments that were appropriate and reliable to characterize male and female drug consumers and non-consumers, in each of the factors being measured applying the statistical function of the Student t distribution of independent samples. The collective analysis was done by anchoring the instruments to each other. Results. Adolescents begin to use legal drugs at the age of 12 years, and start to consume illegal drugs at the age of 13 years. The adolescents were characterized as low risk with regard to factors related to the family, the individual and the environment. However, illegal drug users, both male and female, have a higher risk tan non- consumers. An instrument was derived to measure factors related to the family, the individual and the environment in the future, for consumption and nonconsumption of drugs in adolescents in Minatitlan. Conclusions. The characterization of consumption and non-consumption of drugs provides knowledge for nursing, both theoretical and with regard to measurement. It points out the importance of nursing in the political, social, and administrative management of the demand for drug consumption. It is a point of reference for school nurses and family-practice nurses, in preventive programs based on the factors identified for men and women. Lastly, it provides a theoretical basis for future research in nursing.

HB Fannin-Lubbock-I with a single GGC>GAC mutation at beta119(GH2)Gly-->Asp in a homozygous Mexican patient.

We studied a fast-moving, abnormal hemoglobin (Hb) identified as Fannin-Lubbock-I [beta119(GH2)Gly-->Asp] in a homozygous Mexican girl. To date, homozygosity for the Hb Fannin-Lubbock-I variant has not been reported. Her parents and five other relatives were heterozygotes. The 5' beta-globin haplotype analysis showed that the mutation was associated with haplotype 2 [- + + - +]for the epsilon, (G)gamma, (A)gamma, 5' and 3 'psibeta-globin sites, and also segregated with the TGTTC haplotype, which was constructed with five polymorphic sites of the beta-globin gene [exon 1-nucleotide (nt) 6 (C>T) and IVS-II-16 (C>G), IVS-II-46 (T>C), IVS-II-74 (G>T), and IVS-II-81 (C>T). In 1994, a variant with an additional mutation at codon 111 [beta111(G13)Val-->Leu] was described in five Spanish families. This variant was termed Hb Fannin-Lubbock-II, and the question of the existence of Hb Fannin-Lubbock-I arose. However, based on our findings, we were able to confirm the existence of Hb Fannin-Lubbock-I and propose that this mutation has a different origin from the one identified in Spanish families.

Diversity of the 5' beta-globin haplotype of four beta-thalassemia mutations in the Mexican population.

beta-Globin haplotypes have been used to investigate the origin and spread of beta-globin mutations such as Hb S [beta 6(A3)Glu-->Val, GAG>GTG], Hb E [beta 26(B8)Glu-->Lys, GAG>AAG], and beta-thalassemia (beta-thal). Molecular analyses revealed the presence of 17 beta-thal mutations in the Mexican population; the most frequent of these are the nonsense codon 39 (C>T), IVS-I-1 (G>A), IVS-I-110 (G>A), and -28 (A>C). To improve our knowledge about their origin, we analyzed the 5' haplotypes by restriction fragment length polymorphism. The codon 39 mutation (n = 17) was observed with five 5' haplotypes: 1 (59%), 2 (23%), and 4, 6, and 9 (6% each). The IVS-I-1 mutation (n = 15) was found with five 5' haplotypes: 1 (73.6%), 2, 3, 5, and 11 (6.6% each), whereas the IVS-I-110 (n = 9) and -28 mutations (n = 1) were only associated with haplotype 1. In the population studied, the codon 39 and IVS-I-1 mutations show a multicentric origin, whereas the IVS-I-110 and -28 mutations have an apparent single origin. Further investigation is required for the analysis of the polymorphisms surrounding the beta-globin gene.