Latitudinal gradients in seed predation persist in urbanized environments.

Urbanization is creating a new global biome, in which cities and suburbs around the world often resemble each other more than the local natural areas they replaced. But while urbanization can profoundly affect ecology at local scales, we know little about whether it disrupts large-scale ecological patterns. Here we test whether urbanization disrupts a macroecological pattern central to ecological and evolutionary theory: the increase in seed predation intensity from high to low latitudes. Across 14,000 km of latitude spanning the Americas, we compared predation intensity on two species of standardized experimental seeds in urbanized and natural areas. In natural areas, predation on both seed species increased fivefold from high latitudes to the tropics, one of the strongest latitudinal gradients in species interactions documented so far. Surprisingly, latitudinal gradients in predation were equally strong in urbanized areas despite significant habitat modification. Nevertheless, urbanization did affect seed predation. Compared with natural areas, urbanization reduced overall predation and vertebrate predation, did not affect predation by invertebrates in general, and increased predation by ants. Our results show that macroecological patterns in predation intensity can persist in urbanized environments, even as urbanization alters the relative importance of predators and potentially the evolutionary trajectory of urban populations.

Trees harbouring ants are better defended than con-generic and sympatric ant-free trees.

Plant strategies against herbivores are classically divided into chemical, physical, biotic defences. However, little is known about the relative importance of each type of plant defence, especially in the same species. Using the myrmecophyte Triplaris americana (both with and without ants), and the congeneric non-myrmecophyte T. gardneriana, we tested whether ant defence is more effective than other defences of naturally ant-free myrmecophytes and the non-myrmecophyte congeneric species, all spatially co-occurring. In addition, we investigated how plant traits vary among plant groups, and how these traits modulate herbivory. We sampled data on leaf area loss and plant traits from these tree groups in the Brazilian Pantanal floodplain, and found that herbivory is sixfold lower in plants with ants than in ant-free plants, supporting a major role of biotic defences against herbivory. Whereas ant-free plants had more physical defences (sclerophylly and trichomes), they had little effect on herbivory-only sclerophylly modulated herbivory, but with opposite effects depending on ants' presence and species identity. Despite little variation in the chemicals among plant groups, tannin concentrations and δ13C signatures negatively affected herbivory in T. americana plants with ants and in T. gardneriana, respectively. We showed that ant defence in myrmecophytic systems is the most effective against herbivory, as the studied plants could not fully compensate the lack of this biotic defence. We highlight the importance of positive insect-plant interactions in limiting herbivory, and therefore potentially plant fitness.

From species descriptions to diversity patterns: the validation of taxonomic data as a keystone for ant diversity studies reproducibility and accuracy.

Research findings in natural sciences need to be comparable and reproducible to effectively improve our understanding of ecological and behavioural patterns. In this sense, knowledge frontiers in biodiversity studies are directly tied to taxonomic research, especially in species-rich tropical regions. Here we analysed the taxonomic information available in 470 studies on Brazilian ant diversity published in the last 50 years. We aimed to quantify the proportion of studies that provide enough data to validate taxonomic identification, explore the frequency of studies that properly acknowledge their taxonomic background, and investigate the primary resources for ant identification in Brazil. We found that most studies on Brazilian ant diversity (73.6%) explicitly stated the methods used to identify their specimens. However, the proportion of papers that provide complete data for the repository institutions and vouchered specimens is vanishingly small (5.8%). Additionally, only 40.0% of the studies consistently presented taxon authorities and years of description, rarely referencing taxonomic publications correctly. In turn, the number of specialists and institutions consulted for ant identification in Brazil has increased in the last years, along with the number of studies that explicitly provide their taxonomic procedures for ant identification. Our findings highlight a shift between generations regarding the recognition of taxonomy as fundamental science, deepening our understanding of biodiversity.

The Latent Dirichlet Allocation model with covariates (LDAcov): A case study on the effect of fire on species composition in Amazonian forests.

Understanding and predicting the effect of global change phenomena on biodiversity is challenging given that biodiversity data are highly multivariate, containing information from tens to hundreds of species in any given location and time. The Latent Dirichlet Allocation (LDA) model has been recently proposed to decompose biodiversity data into latent communities. While LDA is a very useful exploratory tool and overcomes several limitations of earlier methods, it has limited inferential and predictive skill given that covariates cannot be included in the model. We introduce a modified LDA model (called LDAcov) which allows the incorporation of covariates, enabling inference on the drivers of change of latent communities, spatial interpolation of results, and prediction based on future environmental change scenarios. We show with simulated data that our approach to fitting LDAcov is able to estimate well the number of groups and all model parameters. We illustrate LDAcov using data from two experimental studies on the long-term effects of fire on southeastern Amazonian forests in Brazil. Our results reveal that repeated fires can have a strong impact on plant assemblages, particularly if fuel is allowed to build up between consecutive fires. The effect of fire is exacerbated as distance to the edge of the forest decreases, with small-sized species and species with thin bark being impacted the most. These results highlight the compounding impacts of multiple fire events and fragmentation, a scenario commonly found across the southern edge of Amazon. We believe that LDAcov will be of wide interest to scientists studying the effect of global change phenomena on biodiversity using high-dimensional datasets. Thus, we developed the R package LDAcov to enable the straightforward use of this model.

Re-establishment of cavity-nesting bee and wasp communities along a reforestation gradient in southern Amazonia.

Global initiatives to reforest degraded areas have intensified in recent years, in an attempt to reverse the environmental impacts of habitat loss on species and ecosystem provided by them. However, the effectiveness of such reforestation initiatives in re-establishing biodiversity is still poorly understood. Here, we test how reforestation type and intensity applied to deforested areas affect the reestablishment of communities of cavity-nesting bees and wasps. We deployed experimental trap-nests along a reforestation gradient of increasing structural similarity to primary forest, after 18 years of reforestation. We found that reestablishment, in terms of abundance and richness of both bees and wasps, was greatest at an intermediate point along the reforestation gradient. However, these communities were highly dissimilar to primary forest, and recovery of intact insect community composition was only achieved when reforestation was more similar in structure to natural forests. This effect was more pronounced for bees than for wasps. Our findings suggest that along the reforestation gradient, services provided by wasps will be more easily recovered than those provided by bees. Our results have important implications for the challenges of restoring and maintaining species biodiversity as well as their associated ecosystem services.

How much leaf area do insects eat? A data set of insect herbivory sampled globally with a standardized protocol.

Herbivory is ubiquitous. Despite being a potential driver of plant distribution and performance, herbivory remains largely undocumented. Some early attempts have been made to review, globally, how much leaf area is removed through insect feeding. Kozlov et al., in one of the most comprehensive reviews regarding global patterns of herbivory, have compiled published studies regarding foliar removal and sampled data on global herbivory levels using a standardized protocol. However, in the review by Kozlov et al., only 15 sampling sites, comprising 33 plant species, were evaluated in tropical areas around the globe. In Brazil, which ranks first in terms of plant biodiversity, with a total of 46,097 species, almost half (43%) being endemic, a single data point was sampled, covering only two plant species. In an attempt to increase knowledge regarding herbivory in tropical plant species and to provide the raw data needed to test general hypotheses related to plant-herbivore interactions across large spatial scales, we proposed a joint, collaborative network to evaluate tropical herbivory. This network allowed us to update and expand the data on insect herbivory in tropical and temperate plant species. Our data set, collected with a standardized protocol, covers 45 sampling sites from nine countries and includes leaf herbivory measurements of 57,239 leaves from 209 species of vascular plants belonging to 65 families from tropical and temperate regions. They expand previous data sets by including a total of 32 sampling sites from tropical areas around the globe, comprising 152 species, 146 of them being sampled in Brazil. For temperate areas, it includes 13 sampling sites, comprising 59 species. Thus, when compared to the most recent comprehensive review of insect herbivory (Kozlov et al.), our data set has increased the base of available data for the tropical plants more than 460% (from 33 to 152 species) and the Brazilian sampling was increased 7,300% (from 2 to 146 species). Data on precise levels of herbivory are presented for more than 57,000 leaves worldwide. There are no copyright restrictions. Please cite this paper when using the current data in publications; the authors request to be informed how the data is used in the publications.

Top-down factors contribute to differences in insect herbivory between saplings and mature trees in boreal and tropical forests.

Ontogenetic changes in herbivory are generally not consistent with ontogenetic changes in defensive traits of woody plants. This inconsistency suggests that other factors may affect ontogenetic trajectories in herbivory. We tested the hypothesis that top-down factors contribute to differences in foliar losses to insects between juvenile and mature trees in tropical and boreal forests. We used artificial caterpillars made of modelling clay to compare predation rates between saplings and mature trees of two common forest species, Siparuna guianensis in Brazil (tropical site) and Betula pubescens in Finland (boreal site). Leaf area losses to chewing insects in saplings were 2.5-fold higher than in mature trees in both species. Physical plant defences (measured as specific leaf area, SLA) did not differ between saplings and mature trees in the boreal forest, whereas in the tropical forest, SLA was greater in saplings than in mature trees. Attack rates on the model prey by birds were higher in the boreal forest, whereas attack rates by arthropod predators were higher in the tropical forest. Overall, predation rates on model prey were consistently higher on mature trees than on saplings at both sites, but in the boreal site, this pattern was primarily driven by birds, whereas in the tropical site, it was primarily driven by arthropod predators. We conclude that the effect of predation on herbivorous insects may considerably contribute to ontogenetic differences in herbivory, but the relative roles of different predatory groups and of top-down and bottom-up factors may vary between environments.

Ant removal distance, but not seed manipulation and deposition site increases the establishment of a myrmecochorous plant.

Myrmecochory (seed dispersal by ants) is a unique seed dispersal syndrome among invertebrates. It comprises three main phases: seed removal, seed manipulation, and seed deposition. However, the contribution of each phase to seed and seedling fate remains unclear. Here, we experimentally quantified the effects of each phase of myrmecochory on seed germination and seedling establishment, the two most critical life history stages involved in plant recruitment. We established 30 sample points, and each included an adult Mabea fistulifera tree, an Atta sexdens nest entrance, and six seed depots. We monitored the germination of M. fistulifera seeds for 3 months and subsequently followed the growth and mortality of the resulting seedlings for 12 months. Only the dispersal distance influenced plant establishment, reducing seed germination and increasing seedling growth, but with no effect of seed manipulation and deposition site. Despite the contrasting effects of distance on seed germination and seedling growth, the positive effect of dispersal distance on seedling growth was ten times greater than the negative effect on seed germination. Moreover, A. sexdens behaved neither as granivore nor as herbivore of M. fistulifera seeds or seedlings, which suggests that seed dispersal by A. sexdens is advantageous to M. fistulifera. Thus, the joint occurrence of these two species in disturbed areas could have a positive effect on this pioneer plant population, which might promote forest regeneration.

Opposite latitudinal patterns for bird and arthropod predation revealed in experiments with differently colored artificial prey.

The strength of biotic interactions is generally thought to increase toward the equator, but support for this hypothesis is contradictory. We explored whether predator attacks on artificial prey of eight different colors vary among climates and whether this variation affects the detection of latitudinal patterns in predation. Bird attack rates negatively correlated with model luminance in cold and temperate environments, but not in tropical environments. Bird predation on black and on white (extremes in luminance) models demonstrated different latitudinal patterns, presumably due to differences in prey conspicuousness between habitats with different light regimes. When attacks on models of all colors were combined, arthropod predation decreased, whereas bird predation increased with increasing latitude. We conclude that selection for prey coloration may vary geographically and according to predator identity, and that the importance of different predators may show contrasting patterns, thus weakening the overall latitudinal trend in top-down control of herbivorous insects.

Fire in the Amazon: impact of experimental fuel addition on responses of ants and their interactions with myrmecochorous seeds.

The widespread clearing of tropical forests causes lower tree cover, drier microclimate, and higher and drier fuel loads of forest edges, increasing the risk of fire occurrence and its intensity. We used a manipulative field experiment to investigate the influence of fire and fuel loads on ant communities and their interactions with myrmecochorous seeds in the southern Amazon, a region currently undergoing extreme land-use intensification. Experimental fires and fuel addition were applied to 40 × 40-m plots in six replicated blocks, and ants were sampled between 15 and 30 days after fires in four strata: subterranean, litter, epigaeic, and arboreal. Fire had extensive negative effects on ant communities. Highly specialized cryptobiotic and predator species of the litter layer and epigaeic specialist predators were among the most sensitive, but we did not find evidence of overall biotic homogenization following fire. Fire reduced rates of location and transport of myrmecochorous seeds, and therefore the effectiveness of a key ecosystem service provided by ants, which we attribute to lower ant abundance and increased thermal stress. Experimental fuel addition had only minor effects on attributes of fire severity, and limited effects on ant responses to fire. Our findings indicate that enhanced fuel loads will not decrease ant diversity and ecosystem services through increased fire severity, at least in wetter years. However, higher fuel loads can still have a significant effect on ants from Amazonian rainforests because they increase the risk of fire occurrence, which has a detrimental impact on ant communities and a key ecosystem service they provide.