Genotype-by-environment and QTL-by-environment interactions in sweet cherry (Prunus avium L.) for flowering date.

In sweet cherry (Prunus avium L.), flowering date is strongly dependent on the environment conditions and, therefore, is a trait of major interest for adaptation to climate change. Such trait can be influenced by genotype-by-environment interaction (G×E), that refers to differences in the response of genotypes to different environments. If not taken into account, G×E can reduce selection accuracy and overall genetic gain. However, little is known about G×E in fruit tree species. Flowering date is a highly heritable and polygenic trait for which many quantitative trait loci (QTLs) have been identified. As for the overall genetic performance, differential expression of QTLs in response to environment (QTL-by-environment interaction, QTL×E) can occur. The present study is based on the analysis of a multi-environment trial (MET) suitable for the study of G×E and QTL×E in sweet cherry. It consists of a sweet cherry F1 full-sib family (n = 121) derived from the cross between cultivars 'Regina' and 'Lapins' and planted in two copies in five locations across four European countries (France, Italy, Slovenia and Spain) covering a large range of climatic conditions. The aim of this work was to study the effect of the environment on flowering date and estimate G×E, to carry QTL detection in different environments in order to study the QTL stability across environments and to estimate QTL×E. A strong effect of the environment on flowering date and its genetic control was highlighted. Two large-effect and environment-specific QTLs with significant QTL×E were identified on linkage groups (LGs) 1 and 4. This work gives new insights into the effect of the environment on a trait of main importance in one of the most economically important fruit crops in temperate regions. Moreover, molecular markers were developed for flowering date and a strategy consisting in using specific markers for warm or cold regions was proposed to optimize marker-assisted selection (MAS) in sweet cherry breeding programs.

Tuning the C/N Ratio of C-Rich Graphitic Carbon Nitride (g-C3 N4 ) Materials by the Melamine/Carboxylic Acid Adduct Route.

C-rich graphitic carbonitride materials (CNx ) with a large range of compositions have been prepared thanks to the self-assembly, in different ratios, of melamine (M) and a panel of polycarboxylic acids (A) such as oxalic, tartaric and citric acid. The thermal conversion of the formed adducts (MAy ), led to CNx phases, with x ranging from 0.66 to 1.4 (x=1.33 for g-C3 N4 for comparison). The properties of these materials were examined by different techniques (XRD, Raman spectroscopy, TEM, TGA, XPS and DRIFT). It appears that the increase in the C content is associated with the disappearance of the long-range order of heptazine units and an increase in the sub-nanometer carbon-rich cluster size within the graphitic g-C3 N4 structure. This trend is followed by a significant increase in the interlayer spacing and a lower proportion of N=C-N bonds compared to C=C bonds. The thermal stability under an inert atmosphere of these phases and their UV-Visible absorbance properties were also investigated.

New insights into flowering date in Prunus: fine mapping of a major QTL in sweet cherry.

Flowering date is an important trait in Prunus fruit species, especially for their adaptation in a global warming context. Numerous quantitative trait loci (QTLs) have been identified and a major one was previously located on LG4. The objectives of this study were to fine-map this QTL in sweet cherry, to identify robust candidate genes by using the new sweet cherry genome sequence of the cultivar 'Regina' and to define markers usable in marker-assisted selection (MAS). We performed QTL analyses on two populations derived from crosses using cultivars 'Regina' and 'Garnet' as parents. The first one (n = 117) was phenotyped over ten years, while the second one (n = 1386) was evaluated during three years. Kompetitive allele specific PCR (KASP) markers located within the QTL region on LG4 were developed and mapped within this region, consisting in the first fine mapping in sweet cherry. The QTL interval was narrowed from 380 kb to 68 kb and candidate genes were identified by using the genome sequence of 'Regina'. Their expression was analyzed from bud dormancy period to flowering in cultivars 'Regina' and 'Garnet'. Several genes, such as PavBOI-E3, PavSR45a and PavSAUR71, were differentially expressed in these two cultivars and could be then considered as promising candidate genes. Two KASP markers were validated using a population derived from a cross between cultivars 'Regina' and 'Lapins' and two collections, including landraces and modern cultivars. Thanks to the high synteny within the Prunus genus, these results give new insights into the control of flowering date in Prunus species and pave the way for the development of molecular breeding strategies.

Counter-gradient variation of reproductive effort in a widely distributed temperate oak (Quercus petraea).

The genetic and phenotypic variability of life history traits determines the demographic attributes of tree populations and, thus, their responses to anthropogenic climate change. Growth- and survival-related traits have been widely studied in forest ecology, but little is known about the determinism of reproductive traits.Using an elevation gradient experiment in the Pyrenees we assessed the degree to which variations in reproductive effort along climatic gradients are environmentally or genetically driven, by comparing oak populations (Quercus petraea) growing under field and common garden conditions.In situ monitoring revealed a decline in reproductive effort with increasing elevation and decreasing temperature. In common garden conditions, significant genetic differentiation was observed between provenances for reproduction and growth: trees from cold environments (high elevations) grew more slowly, and produced larger acorns in larger numbers. Our observations show that genetic and phenotypic clines for reproductive traits have opposite signs (counter-gradient) along the environmental gradient as opposed to growth, for which genetic variation parallels phenotypic variation (co-gradient).The counter-gradient found here for reproductive effort reveals that genetic variation partly counteracts the phenotypic effect of temperature, moderating the change in reproductive effort according to temperature. We consider the possible contribution to this counter-gradient in reproductive effort as an evolutionary trade-off between reproduction and growth.

The within-population variability of leaf spring and autumn phenology is influenced by temperature in temperate deciduous trees.

Leaf phenology is a major driver of ecosystem functioning in temperate forests and a robust indicator of climate change. Both the inter-annual and inter-population variability of leaf phenology have received much attention in the literature; in contrast, the within-population variability of leaf phenology has been far less studied. Beyond its impact on individual tree physiological processes, the within-population variability of leaf phenology can affect the estimation of the average budburst or leaf senescence dates at the population scale. Here, we monitored the progress of spring and autumn leaf phenology over 14 tree populations (9 tree species) in six European forests over the period of 2011 to 2018 (yielding 16 site-years of data for spring, 14 for autumn). We monitored 27 to 512 (with a median of 62) individuals per population. We quantified the within-population variability of leaf phenology as the standard deviation of the distribution of individual dates of budburst or leaf senescence (SDBBi and SDLSi, respectively). Given the natural variability of phenological dates occurring in our tree populations, we estimated from the data that a minimum sample size of 28 (resp. 23) individuals, are required to estimate SDBBi (resp. SDLSi) with a precision of 3 (resp. 7) days. The within-population of leaf senescence (average SDLSi = 8.5 days) was on average two times larger than for budburst (average SDBBi = 4.0 days). We evidenced that warmer temperature during the budburst period and a late average budburst date were associated with a lower SDBBi, as a result of a quicker spread of budburst in tree populations, with a strong species effect. Regarding autumn phenology, we observed that later senescence and warm temperatures during the senescence period were linked with a high SDLSi, with a strong species effect. The shares of variance explained by our models were modest suggesting that other factors likely influence the within-population variation in leaf phenology. For instance, a detailed analysis revealed that summer temperatures were negatively correlated with a lower SDLSi.

One-Pot Soft-Template Synthesis of Nanostructured Copper-Supported Mesoporous Carbon FDU-15 Electrocatalysts for Efficient CO2 Reduction.

Copper-supported mesoporous carbon nanocatalysts (Cu/FDU-15) were synthesized using an easy and convenient one-pot soft-template method for low-overvoltage CO2 electroreduction. TEM imaging revealed the presence of large Cu nanoparticles (diameter 140 nm) with Cu2 O nanoparticles (16 nm) as an additional phase. From the electron tomography observations, we found that the copper particles were placed inside and on the exterior surface of the porous FDU-15 support, providing an accessible surface for electrocatalytic reactions. CO2 electrolyses showed that the mesostructured Cu/FDU-15-350 cathode materials were active towards CO2 conversion to formic acid with 22 % Faradaic efficiency at a remarkably low overpotential of 290 mV, hydrogen being the only side-product. The catalyst's activity correlates to the calculated metallic surface area, as determined from a geometrical model, confirming that the mesoporous channels act as a diffusion path for the CO2 molecule, and that the whole Cu surface is accessible to CO2 , even if particles are entrapped in the carbon matrix.

Physicochemical regulation of TGF and VEGF delivery from mesoporous calcium phosphate bone substitutes.

AIM: Determination of the physicochemical parameters governing growth factors (GFs) adsorption and release from mesoporous calcium phosphate ceramics. MATERIALS & METHODS: Six mesoporous calcium phosphate ceramics prepared by soft and hard templating were loaded with two different physiological concentrations of TGF-ß1 or VEGF165 and their in vitro kinetics of adsorption/release were studied. RESULTS: This low GF loading promotes adsorption on the highest binding sites. The usually encountered detrimental burst release is thus considerably reduced for samples prepared by hard-templating method. CONCLUSION: Our findings highlight that the strong affinity of GFs with the ceramic surfaces, demonstrated by a slow GFs release, is enhanced by the large surface area, confinement into mesopores of ceramics and high difference of surface charge between ceramic surfaces and GFs.

Structure and sorption properties of a zeolite-templated carbon with the EMT structure type.

An ordered microporous carbon material was prepared by the nanocasting process using the EMC-2 zeolite (EMT structure type) as a hard template. X-ray diffraction (XRD) and transmission electron microscopy (TEM) revealed long-range ordering in the material that resulted from the negative replication of the host template. The carbon porous network replicating the zeolite structure was modeled by overlapped spherical voids with diameters determined from the XRD pattern that displayed up to six distinct peaks. The surface delimiting the 3D interconnected porosity of the solid has a complex morphology. The pore size distribution calculated from the XRD-derived structural model is characterized by a maximum at 1.04 nm related to the long-range-ordered microporous network. Complementary studies by immersion calorimetry revealed that most of the porosity was characterized by a size above 1.5 nm. These porous features were compared to data resulting from classical analysis (DR, DFT, BET, etc.) of the N2 (77 K) and CO2 (low and high pressure, 273 K) physisorption isotherms. The limitations of these approaches are discussed in light of the pore size distribution consistently determined by XRD and immersion calorimetry measurements.

Intrusion/Extrusion of water into organic grafted SBA-15 silica materials for energy storage.

Mesoporous SBA-15 silica materials were grafted with trialkylsilyl compounds having short (C1) and long (C8) carbon chain and characterized by XRD, N2 physisorption analysis, 29Si MAS-NMR and contact angle (CA) measurements. A drastic enhancement of the hydrophobic property after grafting was observed by forced intrusion water; it occurred in two steps and with quite high intrusion pressures (mean values - 10 and - 15 MPa). The hydrophobic nature of both internal and external surface area was confirmed by 29Si MAS-NMR and CA measurements, respectively. After contact with water, materials displayed a partial hydrophobic behaviour with uncompleted spontaneous extrusion. The energies absorbed during water intrusion correspond to 4.3 and 6.1 J x g(-1) for C1 and C8 grafted species, respectively.

Microporous carbon adsorbents with high CO2 capacities for industrial applications.

In this study we attempt to investigate the potential use of two zeolite template carbon (ZTC), EMT-ZTC and FAU-ZTC, to capture CO(2) at room temperature. We report their high pressure CO(2) adsorption isotherms (273 K) that show for FAU-ZTC the highest carbon capture capacity among published carbonaceous materials and competitive data with the best organic and inorganic adsorbing frameworks ever-known (zeolites and mesoporous silicas, COFs and MOFs). The importance of these results is discussed in light of mitigation of CO(2) emissions. In addition to these new experimental CO(2) adsorption data, we also present new insight into the adsorption process of the two structures by Monte Carlo simulations: we propose that two separate effects are responsible for the apparent similarity of the adsorption behaviour of the two structures: (i) pore blocking occurring on EMT-ZTC, and (ii) the change of the carbon polarizability due to the extreme curvature of FAU-ZTC.

Direct observation of stacking faults and pore connections in ordered cage-type mesoporous silica FDU-12 by electron tomography.

The porous structure and the periodic array of cavities in ordered mesoporous materials with large, three-dimensionally arranged and interconnected pores is thoroughly described by combining electron tomography, small-angle X-ray diffraction, and nitrogen sorption techniques. We used the ability of the electron tomography to provide local three-dimensional information of a nano-object and compared the results to those of the other characterization techniques which furnish global information. We showed thus that the face-centered cubic (fcc) structure usually assigned to the FDU-12 materials is in fact an intergrowth of cubic and hexagonal close-packing structures. This agrees with small-angle X-ray scattering (SAXS) modeling, but for the first time a direct visualization of these stacking faults was achieved. Three-dimensional transmission electron microscopy (3D-TEM) provides also a direct and unique evidence of peculiar stacking defects ("z-shifted [111] areas"), as well as an estimate of their density, which have never been reported elsewhere. In addition, interstitial cavities were also observed, revealing the complex defective structure of this material. A direct observation of the nature of the connecting pores was also achieved for the first time, with a resolution limit of 2 nm. Finally, the characteristics of the porous network evidenced by 3D-TEM are used to explain and validate the results obtained by nitrogen sorption experiments.

First zeolite carbon replica with a well resolved X-ray diffraction pattern.

The present study demonstrates that for the nanocasting process with zeolites, a careful choice of the zeolite structure type (EMT) allows the formation of faithful carbon replica exhibiting up to three well resolved XRD peaks.

Carbon and SiC macroscopic beads from ion-exchange resin templates.

A method for preparing carbon and SiC macroscopic beads using ion-exchange resins as a macrotemplate that determines the macroshape and the pore structure of the product materials is reported. First, silicates are ion-exchanged into the resins to prevent the resin from collapsing during subsequent carbonization and allow them to be used as precursors for SiC formation. SiC is prepared via carbothermal reduction of carbon/silica composite beads obtained upon carbonization of the resin/silicate in an inert atmosphere. Finally, silica is removed by HF etching. Very high-surface area (1670-2026 m2 g-1) micro- or micro-/mesoporous carbon beads and relatively high-surface area (35-63 m2 g-1) macro- and meso-/macroporous SiC beads were prepared by the described method. The pore structure and the macroshape of the particles were controlled by the type of ion-exchange resins employed, gel or macroreticular.