Adaptive and Dissipative Hierarchical Population Crowding of Synthetic Protocells through Click-PISA under Gradient Energy Inputs.

The ability of living objects to respond rapidly en masse to various stimuli or stress is an important function in response to externally applied changes in the local environment. This occurs across many length scales, for instance, bacteria swarming in response to different stimuli or stress and macromolecular crowding within cells. Currently there are few mechanisms to induce similar autonomous behaviors within populations of synthetic protocells. Herein, we report a system in which populations of individual objects behave in a coordinated manner in response to changes in the energetic environment by the emergent self-organization of large object swarms. These swarms contain protocell populations of approximately 60 000 individuals. We demonstrate the dissipative nature of the hierarchical constructs, which persist under appropriate UV stimulation. Finally, we identify the ability of the object populations to change behaviors in an adaptive population-wide response to the local energetic environment.

CORE: A Global Aggregation Service for Open Access Papers.

This paper introduces CORE, a widely used scholarly service, which provides access to the world's largest collection of open access research publications, acquired from a global network of repositories and journals. CORE was created with the goal of enabling text and data mining of scientific literature and thus supporting scientific discovery, but it is now used in a wide range of use cases within higher education, industry, not-for-profit organisations, as well as by the general public. Through the provided services, CORE powers innovative use cases, such as plagiarism detection, in market-leading third-party organisations. CORE has played a pivotal role in the global move towards universal open access by making scientific knowledge more easily and freely discoverable. In this paper, we describe CORE's continuously growing dataset and the motivation behind its creation, present the challenges associated with systematically gathering research papers from thousands of data providers worldwide at scale, and introduce the novel solutions that were developed to overcome these challenges. The paper then provides an in-depth discussion of the services and tools built on top of the aggregated data and finally examines several use cases that have leveraged the CORE dataset and services.

A survey of enteric disease agents in UK deer populations.

Wild deer products have been linked to outbreaks of Escherichia coli 0157 in humans and bovine tuberculosis (bTB) in domestic cats, raising concerns around foodborne diseases from venison. This study investigated the prevalence of several enteric disease agents in UK deer populations, including foodborne pathogens and other diseases of import to livestock health. Intestinal samples were collected from slaughtered farmed deer (N = 211, eight farms), shot wild deer (N = 136) and ground faecal samples were collected from two farms (N = 90), six parks (N = 228) and five zoos (N = 67). DNA was extracted and multiplex qPCR assays were run to amplify targets of, C. perfringens toxins, Campylobacter spp., E. coli toxins, Mycobacterium avium subsp. Paratuberculosis (MAP), Salmonella spp. and Yersinia spp. The most commonly amplified targets were E. coli astA (61.2%) and Campylobacter spp. (43.3%), but the prevalence of C. coli and C. jejuni were ≤ 3.0% and Salmonella spp., MAP and Yersinia pseudotuberculosis also had low overall prevalences of 1.6%, 3.3% and 2.6%, respectively. However, notable targets included C. perfringens toxins α (20.4%) and ß2 (16.9%); E. coli stx1 (14.6% overall, 28.0% in abattoir samples) and stx2 (17.8% overall, 31.6% in wild samples); and Yersinia enterocolitica (10.8% overall, 25% in wild samples). The low prevalence of some foodborne pathogens is reassuring for food safety; further investigations into the commonly found targets are needed to quantify the risk to public health and the possibility of wild deer acting as reservoirs of disease.

A survey of handling and transportation of UK farmed deer.

Studies on the transport of deer (Cervidae), in the UK, were published > 15 years ago. A more recent study of deer transport is required to allow for assessments and improvements to the transport of farmed deer. Sixteen deer farmers participated in a survey describing their management practices related to transport. Their responses showed that most vehicles used to transport deer were designed for other livestock. Participating farmers estimated journey times to slaughter as 1-8 h, with an arithmetic mean of 4.8 (± 2.38) h. Specific concerns raised by the respondents, relating to the transport of deer, included a need for deer-specific vehicles, stop-off areas for long journeys, market locations and haulier experience. Furthermore, data were collected from two abattoirs between July 2019 and June 2020 comprising journey times, slaughter times, bruising, location of origin, vehicle type and the number of animals. In total, 4,922 deer were transported across 133 journeys (from farm to abattoir) from 61 farms. Median and range for journey length were 3.2 (0.4-9.8) h and 154.2 (7.1-462.2) km, whereas group size and time spent in the lairage were 24 (1-121) and 17.8 (10.2-68.9) h, respectively. Group size was found to be significantly associated with both the presence of bruising in a group and the amount of bruising per deer. This study provides a much-needed update on the transport of farmed deer in the UK and highlights key areas for future research including the welfare impact of transport in larger groups and for longer durations.

Role of Competitive Crystallization Kinetics in the Formation of 2D Platelets with Distinct Coronal Surface Patterns via Seeded Growth.

Low dispersity 2D platelet micelles with controllable surface patterns were prepared by seeded-growth/living crystallization-driven self-assembly (CDSA) of block copolymer/homopolymer (BCP/HP) blends of poly(ferrocenyldimethylsilane)-b-poly(2-vinyl pyridine) (PFS-b-P2VP) and PFS. The precise morphology was found to be dependent on the proportion of the P2VP corona block, which can be efficiently controlled by changing the molar concentration ratio of PFS-b-P2VP/PFS, (cB/cH)t, as well as their relative rates of crystallization, (GB/GH)t. In the case where their molar concentration ratio was comparable to their crystallization rate ratio, platelets with a uniform distribution of P2VP coronal chains were formed. In other cases, as the concentration ratio increased (or decreased) during the living CDSA process, hierarchical structures were formed, including chain-like assemblies consisting of end-to-end linked rectangular platelets and fusiform (tapered) micelles. (GB/GH)t was adjusted by tuning the degree of polymerization of the crystallizable PFS core-forming block and the BCP block ratio and by varying the terminus of the HP or changing the solvent used. Furthermore, the open edge of the platelets remained active for further growth, which permitted control of the morphology and dimensions of the platelets. Interestingly, in cases where the molar concentration ratio was lower than the crystallization rate ratio, growth rings were observed after two or more living CDSA steps. This study on the formation of platelet micelles by living CDSA of BCP/HP blends under kinetic control offers a considerable scope for the design of 2D polymer nanomaterials with controlled shape and surface patterns.

Exploring the "Living" Growth of Block Copolymer Nanofibers from Surface-Confined Seeds by In Situ Solution-Phase Atomic Force Microscopy.

Living crystallization-driven self-assembly of polymeric and molecular amphiphiles is of growing interest as a seeded growth route to uniform 1D, 2D, and more complex micellar nanoparticles with controlled dimensions and a range of potential applications. Although most studies have been performed using colloidally stable seeds in bulk solution, growth of block copolymer (BCP) nanofibers from seeds confined to a surface is attracting increased attention. Herein, we have used atomic force microscopy (AFM) to undertake detailed studies of the growth of BCP nanofibers from immobilized seeds located on a Si surface. Through initial ex situ AFM studies and in situ AFM video analysis in solution, we determined that growth occurred in four stages, whereby an initial surface-bound growth regime transitions to surface-limited growth. As the nanofiber length increases, surface influence is diminished as the newly grown micelle segment is no longer bound to the Si substrate. Finally, a surface-independent regime occurs where nanofiber growth continues into bulk solution. In addition to the anticipated nanofiber elongation, our studies revealed occasional examples of AFM tip-induced core fragmentation. In these cases, the termini of the newly formed fragments were also active to further growth. Furthermore, unidirectional growth was detected in cases where the seed was oriented at a significant angle with respect to the surface, thereby restricting unimer access to one terminus.

Chemoadaptive Polymeric Assemblies by Integrated Chemical Feedback in Self-Assembled Synthetic Protocells.

The design and chemical synthesis of artificial material objects which can mimic the functions of living cells is an important ongoing scientific endeavor. A key challenge necessary for fulfilling the criteria for a system to be living currently regards evolution, which is derived from adaptivity. Integrated chemical loops capable of feedback control are required to achieve chemical systems which exhibit adaptivity. To explore this, we present an integrated, two-component orthogonal chemical process involving reversible addition-fragmentation chain transfer (RAFT) based polymerization-induced self-assembly (PISA) and a copper-catalyzed azide-alkyne click (CuAAC) coupling reaction. The chemical processes are linked through electron transfer from the activated chain-transfer agent (CTA) to the dormant Cu(II) precatalyst. We show that combining these complementary chemistries in a single reaction pot resulted in two primary outcomes: (i) simplification of the PISA process to synthesize the macro-CTA in situ from available nonamphiphilic components and (ii) routes to complexity and adaptation involving population dynamics, morphologies, and dissipative phenomena observed during in situ microscopy analysis.

Dendritic Micelles with Controlled Branching and Sensor Applications.

Although micelles derived from the solution self-assembly of amphiphilic molecules and polymers have been prepared with a wide variety of shapes, examples with well-defined branched structures have remained elusive. We describe a divergent, directed self-assembly approach to low dispersity dendritic micelles with a high degree of structural perfection and tailorable branch numbers and generations. We use block copolymer amphiphiles as precursors and a crystallization-driven seeded growth approach whereby the termini of fiber-like micelles function as branching sites. Different dendrimeric generations are accessible by adjusting the ratio of added unimers to pre-existing seed micelles where the branch positions are determined by the reduced coronal chain grafting density on the surface of the micelle crystalline core. We demonstrate the spatially defined decoration of the assemblies with emissive nanoparticles and utility of the resulting hybrids as fluorescent sensors for anions where the dendritic architecture enables ultrahigh sensitivity.

Antiplatelet Drugs for Neurointerventions: Part 2 Clinical Applications.

Endovascular techniques have expanded to include balloon and stent-assistance, flow diversion and individualized endovascular occlusion devices, to widen the treatment spectrum for more complex aneurysm morphologies. While usually well-tolerated by patients, endovascular treatment of intracranial aneurysms carries the risk of complications, with procedure-related ischemic complications being the most common. Several antiplatelet agents have been studied in a neurointerventional setting for both prophylaxis and in the setting of intraprocedural thrombotic complications. Knowledge of these antiplatelet agents, evidence for their use and common dosages is important for the practicing neurointerventionist to ensure the proper application of these agents.Part one of this two-part review focused on basic platelet physiology, pharmacology of common antiplatelet medications and future directions and therapies. Part two focuses on clinical applications and evidence based therapeutic regimens.

Tailored self-assembled photocatalytic nanofibres for visible-light-driven hydrogen production.

The creation of efficient artificial systems that mimic natural photosynthesis represents a key current challenge. Here, we describe a high-performance recyclable photocatalytic core-shell nanofibre system that integrates a cobalt catalyst and a photosensitizer in close proximity for hydrogen production from water using visible light. The composition, microstructure and dimensions-and thereby the catalytic activity-of the nanofibres were controlled through living crystallization-driven self-assembly. In this seeded growth strategy, block copolymers with crystallizable core-forming blocks and functional coronal segments were coassembled into low-dispersity, one-dimensional architectures. Under optimized conditions, the nanofibres promote the photocatalytic production of hydrogen from water with an overall quantum yield for solar energy conversion to hydrogen gas of ~4.0% (with a turnover number of >7,000 over 5 h, a frequency of >1,400 h-1 and a H2 production rate of >0.327 µmol h-1 with 1.34 µg of catalytic polymer (that is, >244,300 µmol h-1 g-1 of catalytic polymer)).

Antiplatelet Drugs for Neurointerventions: Part 1 Clinical Pharmacology.

The development of endovascular treatment for intracranial aneurysms has established new techniques such as balloon and stent-assistance, flow diversion and endosaccular occlusion devices. Antiplatelet treatment is an important aspect to reduce risk of thrombus formation on microcatheters and implanted devices when utilizing these methods. It is particularly relevant for flow diverting stents to prevent early and late stent thrombosis. Consideration of platelet physiology and appropriate selection of antiplatelet medication is important as platelet dysfunction drives many of the pathological processes and complications of neurointerventional procedures. Part one of this review focuses on basic platelet physiology, pharmacology of common antiplatelet medications and future directions and therapies. Part two focuses on clinical applications and evidence-based therapeutic regimens.

Surface Patterning of Uniform 2D Platelet Block Comicelles via Coronal Chain Collapse.

The formation of colloids with anisotropically patterned surfaces is of growing interest for the creation of hierarchical structures and the templating of nanoparticles. We have recently shown that well-defined two-dimensional platelets with low areal dispersities can be formed by the seeded growth of a blend of homopolymers and block copolymers. Herein we form rectangular platelets containing two block copolymers with different coronal chemistries. On addition of a solvent that is only able to solvate the corona of one block, we were able to form colloidally stable micelles with patterned surfaces via coronal collapse. Scanning transmission electron microscopy-energy-dispersive X-ray spectroscopy and atomic force microscopy were employed to provide information on the structure and size of the patches decorating the micelle surfaces.

Scalable Fiber-like Micelles and Block Co-micelles by Polymerization-Induced Crystallization-Driven Self-Assembly.

Self-assembled 1D block copolymer nanoparticles (micelles) are of interest for a range of applications. However, morphologically pure samples are often challenging to access, and precise dimensional control is not possible. Moreover, the development of synthetic protocols that operate on a commercially viable scale has been a major challenge. Herein, we describe the preparation 1D fiber-like micelles with crystalline cores at high concentrations by a one-pot process termed polymerization-induced crystallization-driven self-assembly (PI-CDSA). We also demonstrate the formation of uniform fibers by living PI-CDSA, a process in which block copolymer synthesis, self-assembly, and seeded growth are combined. We have demonstrated that the method is successful for block copolymers that possess the same composition as that of the seed (homoepitaxial growth) and also where the coronal chemistries differ to give segmented 1D fibers known as block co-micelles. We have also shown that heteroepitaxial growth allows the formation of scaled-up block co-micelles where the composition of both the core and corona was varied. These proof-of-concept experiments indicate that PI-CDSA is a promising, scalable route to a variety of polydisperse or uniform 1D nanoparticles based on block copolymers with different crystalline core chemistries and, therefore, functions.

Tn2008-driven carbapenem resistance in Acinetobacter baumannii isolates from a period of increased incidence of infections in a Southwest Virginia hospital (USA).

OBJECTIVES: The objectives of this study were (i) to determine the genetic basis for carbapenem resistance in multidrug-resistant (MDR) Acinetobacter baumannii strains isolated from patients affected by a sudden increase in the incidence of infections by such organisms in a tertiary care hospital in Virginia, USA, in 2009-2010 and (ii) to examine whether such strains are commonly encountered in the hospital setting. METHODS: The whole genomes of one outbreak strain as well as one carbapenem-resistant and one carbapenem-sensitive strain from sporadic infections in 2010-2012 were sequenced and analysed. Then, 5 outbreak isolates and 57 sporadic isolates (of which 39 were carbapenem-resistant) were screened by PCR for relevant DNA elements identified in the genomics investigation. RESULTS: All three strains for which whole-genome sequences were obtained carried resistance genes linked to MDR phenotypes and a ca. 111-kbp plasmid (pCMCVTAb1) without drug resistance genes. Of these, the two carbapenem-resistant strains possessed a ca. 74-kbp plasmid (pCMCVTAb2) carrying a Tn2008 transposon that provides high-level carbapenem resistance. PCR analysis showed that all of the outbreak isolates carried both plasmids and Tn2008, and of the sporadic isolates 88% carried pCMCVTAb1, 25% contained pCMCVTAb2 and 50% of the latter group carried Tn2008. CONCLUSIONS: Carbapenem resistance in outbreak strains and 12% of sporadic isolates was due to the pCMCVTAb2-borne Tn2008. This is the first report of a Tn2008-driven outbreak of carbapenem-resistant A. baumannii infections in the Commonwealth of Virginia, which followed similar cases in Pennsylvania and Ohio.

Self-Assembly and Surface Patterning of Polyferrocenylsilane-Functionalized Gold Nanoparticles.

Chemical and topographic surface patterning of inorganic polymer-functionalized nanoparticles (NPs) and their self-assembly in nanostructures with controllable architectures enable the design of new NP-based materials. Capping of NPs with inorganic polymer ligands, such as metallopolymers, can lead to new synergetic properties of individual NPs or their assemblies, and enhance NP processing in functional materials. Here, for gold NPs functionalized with polyferrocenylsilane, two distinct triggers are used to induce attraction between the polymer ligands and achieve NP self-assembly or topographic surface patterning of individual polymer-capped NPs. Control of polymer-solvent interactions is achieved by either changing the solvent composition or by the electrooxidation of polyferrocenylsilane ligands. These results expand the range of polymer ligands used for NP assembly and patterning, and can be used to explore new self-assembly modalities. The utilization of electrochemical polymer oxidation stimuli at easily accessible potentials broadens the range of stimuli leading to NP self-assembly and patterning.

Sleep disturbance and deficits of sustained attention following stroke.

OBJECTIVE: To simultaneously investigate the prevalence of and impact that the poststroke complications of daytime sleepiness, poor sleep quality, depression, and fatigue may be having upon deficits of sustained attention, as assessed using the Psychomotor Vigilance Task (PVT). METHOD: Twenty-two patients with stroke (mean age: 68.23 ± 12.17 years) and 20 healthy control participants (mean age: 68.1 ± 9.5 years) completed subjective measures of daytime sleepiness, sleep quality, fatigue, and depression and an objective measure of sustained attention as assessed using the PVT. RESULTS: Patients with stroke compared to controls showed heightened levels of fatigue (p = .001, η(2) = .29) and depression (p = .002, η(2) = .23), plus greater deficits of sustained attention as reflected by poorer performance across all PVT outcome measures including: slower mean reaction times (p = .002, η(2) = .22); increased number of lapses (p = .002, η(2) = .24); and greater variability in reaction time (RT) responses (p = .016, η(2) = .15). Reaction time distribution analysis suggested that daytime sleepiness and sleep quality had little influence across PVT performance; however, depressive symptomology was associated with longer RT responses, indicative of inattention, and fatigue impacted upon the entire distribution of PVT responses. CONCLUSIONS: PVT performance illustrated significant deficits across the domain of sustained attention for patients with stroke in comparison to healthy controls, in terms of inattention as well as slower sensory-motor speed. The common poststroke complications of depressive symptomology and fatigue appear to be associated with these deficits in sustained attention, warranting further investigation.

Illusory motion reversals and feature tracking analyses of movement.

Illusory motion reversals (IMRs) can happen when looking at a repetitive pattern of motion, such as a spinning wheel. To date these have been attributed to either a form of motion aftereffect seen while viewing a moving stimulus or to the visual system taking discrete perceptual snapshots of continuous input. Here we present evidence that we argue is inconsistent with both proposals. First, we show that IMRs are driven by the adaptation of nondirectional temporal frequency tuned cells, which is inconsistent with the motion aftereffect account. Then we establish that the optimal frequency for inducing IMRs differs for color and luminance defined movement. These data are problematic for any account based on a constant rate of discrete perceptual sampling. Instead, we suggest IMRs result from a perceptual rivalry involving discrepant signals from a feature tracking analysis of movement and motion-energy based analyses. We do not assume that feature tracking relies on a discrete sampling of input at a fixed rate, but rather that feature tracking can (mis)match features at any rate less than a stimulus driven maximal resolution. Consistent with this proposal, we show that the critical frequency for inducing IMRs is dictated by the duty cycle of salient features within a moving pattern, rather than by the temporal frequency of luminance changes.

Facial coding is disrupted at equiluminance.

Human face recognition is disrupted by the reversal of luminance contrast polarity (ie photo negatives--see Galper 1970 Psychonomic Science 19 207-208; Johnston et al 1992 Perception 21 365-375), while recognition of other objects is less impacted (Nederhouser et al 2007 Vision Research 47 2134-2142; Subramaniam and Biederman 1997 Investigative Ophthalmology & Visual Science 38 998). This suggests that correct patterns of luminance contrast are important for facial coding. Here we investigate this further by minimising luminance contrast. We contrast peoples' ability to categorise cars and faces when images vary in luminance and when images are altered to predominantly contain differences in colour (equiluminance). Eliminating luminance contrast had a greater adverse impact on facial classifications relative to car categorisations. This was true even though precautions were taken to equate visibility, and despite equal levels of performance when images contained luminance contrast. These results were not due to images containing markedly different spectra, as the effect persisted for facial images altered to match car images in this regard, and performance in both tasks dropped off proportionally with increasing levels of image blur. Finally, consistent with previous observations, we show that facial coding is not only adversely impacted at equiluminance but becomes even worse when the polarity of luminance contrast is reversed. Our data show that the correct pattern of luminance contrast is very important for facial coding. We suggest that this is related to the role of luminance contrast in signalling 3-D shape from shading.

Attentional-tracking acuity is modulated by illusory changes in perceived speed.

Many activities, such as driving or playing sports, require simultaneous monitoring of multiple, often moving, objects. Such situations tap people's ability to attend selected objects without tracking them with their eyes--this is known as attentional tracking. It has been established that attentional tracking can be affected by the physical speed of a moving target. In the experiments reported here, we showed that this effect is primarily due to apparent speeds, as opposed to physical speeds. We used sensory adaptation--in this case, prolonged exposure to adapting stimuli moving faster or slower than standard test stimuli--to modulate perceived speed. We found performance decrements and increments for apparently sped and slowed test stimuli when participants attempted attentional tracking. Our data suggest that both perceived speed and the acuity of attention for moving objects reflect a ratio of responses in low-pass and band-pass temporal-frequency channels in human vision.