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With their strong confining porosity and versatile surface chemistry, zeolitic imidazolate frameworks-including the prototypical ZIF-8-display exceptional properties for various applications. In particular, the forced intrusion of water at high pressure (â¼25 MPa) into ZIF-8 nanopores is of interest for energy storage. Such a system reveals also ideal to study experimentally water dynamics and thermodynamics in an ultrahydrophobic confinement. Here, we report on neutron scattering experiments to probe the molecular dynamics of water within ZIF-8 nanopores under high pressure up to 38 MPa. In addition to an overall confinement-induced slowing down, we provide evidence for strong dynamical heterogeneities with different underlying molecular dynamics. Using complementary molecular simulations, these heterogeneities are found to correspond to different microscopic mechanisms inherent to vicinal molecules located in strongly adsorbing sites (ligands) and other molecules nanoconfined in the cavity center. These findings unveil a complex microscopic dynamics, which results from the combination of surface residence times and exchanges between the cavity surface and center.
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A Compton spectroscopy investigation is carried out in hydrated Nafion membranes, enabling identification of distortions in the hydrogen-bond distribution of the polymer hydrating water by means of the subtle changes reflected by the Compton profiles. Indeed, deformations of the Compton profiles are observed when varying hydration, and two different bonding kinds are associated with the water molecules: at low hydration, water surrounds the sulfonic groups, while on increasing hydration, water molecules occupy the interstitial cavities formed upon swelling of the membrane. The analysis is proposed in terms of averaged OH bond length variation. A sizable contraction of the OH distance is observed at low hydration (â¼0.09 Å), while at higher hydration levels, the contraction is smaller (â¼0.02 Å) and the OH bond length is closer to bulk water. An evaluation of the electron kinetic energy indicates that the spatial changes associated with the water distribution correspond to a consistent binding energy increase. Distinct temperature dependences of each water population are observed, which can be straightly related to water desorption into ice on cooling below the freezing point.
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The nanoscale characteristics of the mineral phase in bone tissue such as nanocrystal size, organization, structure and composition have been identified as potential markers of bone quality. However, such characterization remains challenging since it requires combining structural analysis and imaging modalities with nanoscale precision. In this paper, we report the first application of automated crystal orientation mapping using transmission electron microscopy (ACOM-TEM) to the structural analysis of bone mineral at the individual nanocrystal level. By controlling the nanocrystal growth of a cortical bovine bone model artificially heated up to 1000⯰C, we highlight the potential of this technique. We thus show that the combination of sample mapping by scanning and the crystallographic information derived from the collected electron diffraction patterns provides a more rigorous analysis of the mineral nanostructure than standard TEM. In particular, we demonstrate that nanocrystal orientation maps yield valuable information for dimensional analysis. Furthermore, we show that ACOM-TEM has sufficient sensitivity to distinguish between phases with close crystal structures and we address unresolved questions regarding the existence of a hexagonal to monoclinic phase transition induced by heating. This first study therefore opens new perspectives in bone characterization at the nanoscale, a daunting challenge in the biomedical and archaeological fields, which could also prove particularly useful to study the mineral characteristics of tissue grown at the interface with biomaterials implants. STATEMENT OF SIGNIFICANCE: In this paper, we propose a new approach to assess the mineral properties of bone at the individual nanocrystal level, a major challenge for decades. We use a modified Transmission Electron Microscopy acquisition mode to perform an Automated Crystal Orientation Mapping (ACOM-TEM) by analyzing electron diffraction patterns. We tune the mineral nanocrystal size by heating a model bovine bone system and show that this method allows precisely assessing the mineral nanocrystal size, orientation and crystallographic phase. ACOM-TEM therefore has sufficient sensitivity to solve problems that couldn't be answered using X-ray diffraction. We thus revisit the fine mechanisms of bone nanocrystal growth upon heating, a process currently used for bone graft manufacturing, also of practical interest for forensic science and archaeology.
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Materiais Biocompatíveis/química , Osso e Ossos/química , Calcificação Fisiológica , Nanopartículas/química , Próteses e Implantes , Animais , Fenômenos Biomecânicos , Desenvolvimento Ósseo , Osso e Ossos/diagnóstico por imagem , Bovinos , Cristalografia por Raios X , Durapatita , Fêmur/química , Fêmur/diagnóstico por imagem , Temperatura Alta , Microscopia Eletrônica de Transmissão , Nanocompostos/química , Polimetil Metacrilato , Temperatura , Engenharia TecidualRESUMO
The propagation of acoustic waves in water-hydrated Nafion membrane has been monitored using heterodyne-detected transient grating spectroscopy. At room temperature, upon increasing the water content, the speed of sound drops to a value lower than the respective velocities of sound in pure Nafion and pure water. This counterintuitive effect can be explained by a simple calculation of the sound velocity in an effective medium made of water and Nafion polymer. Upon cooling, a phase separation occurs in the sample, and the formation of ice is observed (M. Pineri et al. J. Power Sources 2007, 172, 587-596). This phase transition is characterized via a second acoustic wave observed in the signal. Sound propagation and X-ray diffraction confirm the formation of crystalline ice on the membrane surface, that reversibly melts upon heating. The amount of ice that forms in the sample is monitored as a function of temperature and represents an order parameter for the transition. This parameter follows a power law with an exponent of 0.5, indicating the critical nature of the observed process.
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The observation of a first order phase transition between two fluid phases, reported by R. Angelini [Phys. Rev. E 78, 020502(R) (2008)], is not supported by the measurements and is shown to be caused by the loss of solubility of alpha-cyclodextrin in the water-4-methylpyridine solvent.
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Within the overall understanding of the glass transition, the relationship between microscopic dynamics and fragility is still to be clarified. Decalin is an organic glass former, for which a cis/trans mixture exhibits the highest known degree of fragility in a molecular system. It is therefore an ideal system for the investigation of microscopic dynamics in fragile systems. In the present study, the microscopic dynamics of pure cis-decalin has been measured by inelastic and quasi-elastic incoherent neutron scattering, giving the single particle self-correlation function. The fast relaxation dynamics and low-frequency vibrational modes are reported here. Both in the glass and in the crystal the vibrations show strong anharmonic behavior. In the glass phase, the short time microscopic dynamics evolve rapidly with temperature, however do not exhibit any significant change around the glass transition temperature T(g). The elastic intensity provides a measure of the mean square displacements which are comparable to those measured in other fragile glass formers, in particular, the archetypical fragile glass former orthoterphenyl. It appears that the microscopic relaxation gets unfrozen, relative to T(g), at much lower temperature than in other fragile systems.
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Naftalenos/química , Nêutrons , Cristalização , Modelos Químicos , Transição de Fase , Espalhamento de Radiação , Temperatura , VibraçãoRESUMO
The function and dynamics of proteins depend on their direct environment, and much evidence has pointed to a strong coupling between water and protein motions. Recently however, neutron scattering measurements on deuterated and natural-abundance purple membrane (PM), hydrated in H2O and D2O, respectively, revealed that membrane and water motions on the ns-ps time scale are not directly coupled below 260 K (Wood et al. in Proc Natl Acad Sci USA 104:18049-18054, 2007). In the initial study, samples with a high level of hydration were measured. Here, we have measured the dynamics of PM and water separately, at a low-hydration level corresponding to the first layer of hydration water only. As in the case of the higher hydration samples previously studied, the dynamics of PM and water display different temperature dependencies, with a transition in the hydration water at 200 K not triggering a transition in the membrane at the same temperature. Furthermore, neutron diffraction experiments were carried out to monitor the lamellar spacing of a flash-cooled deuterated PM stack hydrated in H2O as a function of temperature. At 200 K, a sudden decrease in lamellar spacing indicated the onset of long-range translational water diffusion in the second hydration layer as has already been observed on flash-cooled natural-abundance PM stacks hydrated in D2O (Weik et al. in J Mol Biol 275:632-634, 2005), excluding thus a notable isotope effect. Our results reinforce the notion that membrane-protein dynamics may be less strongly coupled to hydration water motions than the dynamics of soluble proteins.
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Deutério/química , Difração de Nêutrons , Membrana Purpúrea/química , Água/química , Halobacterium salinarum/citologia , Halobacterium salinarum/metabolismo , Proteínas de Membrana/química , Proteínas de Membrana/metabolismo , Movimento , Membrana Purpúrea/metabolismo , Temperatura , Fatores de Tempo , Água/metabolismoRESUMO
The dynamical coupling between proteins and their hydration water is important for the understanding of macromolecular function in a cellular context. In the case of membrane proteins, the environment is heterogeneous, composed of lipids and hydration water, and the dynamical coupling might be more complex than in the case of the extensively studied soluble proteins. Here, we examine the dynamical coupling between a biological membrane, the purple membrane (PM), and its hydration water by a combination of elastic incoherent neutron scattering, specific deuteration, and molecular dynamics simulations. Examining completely deuterated PM, hydrated in H(2)O, allowed the direct experimental exploration of water dynamics. The study of natural abundance PM in D(2)O focused on membrane dynamics. The temperature-dependence of atomic mean-square displacements shows inflections at 120 K and 260 K for the membrane and at 200 K and 260 K for the hydration water. Because transition temperatures are different for PM and hydration water, we conclude that ps-ns hydration water dynamics are not directly coupled to membrane motions on the same time scale at temperatures <260 K. Molecular-dynamics simulations of hydrated PM in the temperature range from 100 to 296 K revealed an onset of hydration-water translational diffusion at approximately 200 K, but no transition in the PM at the same temperature. Our results suggest that, in contrast to soluble proteins, the dynamics of the membrane protein is not controlled by that of hydration water at temperatures <260 K. Lipid dynamics may have a stronger impact on membrane protein dynamics than hydration water.
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Proteínas de Membrana/química , Água/química , Membrana Celular/metabolismo , Óxido de Deutério/química , Ligação ProteicaRESUMO
Solutions composed of alpha-cyclodextrin (alpha-CD), water, and various methylpyridines, in particular, 4-methylpyridine (4MP), undergo reversible liquid-solid transitions upon heating, the crystalline solid phases undergoing further phase transformations at higher temperatures. This unusual behavior has been characterized by an ensemble of measurements, including solubility, differential scanning calorimetry, quasielastic neutron scattering, as well as x-ray powder diffraction. For the alpha-CD/4MP system five crystalline phases have been identified. The unit cell parameters and corresponding changes with temperature indicate a scenario for the crystallization process. A simple model is proposed that mimics the observed disorder-order transition.
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The vibrational spectra of benzanilide and poly(p-phenylene terephthalamide) have been measured using inelastic neutron scattering. These compounds have similar hydrogen-bond networks, which, for poly(p-phenylene terephthalamide), lead to two-dimensional hydrogen-bonded sheets in the crystal. Experimental spectra are compared with solid-state, quantum chemical calculations based on density functional theory (DFT). Such "parameter-free" calculations allow the structure-dynamics relation in this type of compound to be quantified, which is demonstrated here for benzanilide. In the case of poly(p-phenylene terephthalamide), vibrational spectroscopy and DFT calculations help resolve long-standing questions about the packing of hydrogen-bonded sheets in the solid state.
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Neutron spectroscopy in the microeV and meV regime and quasielastic scattering is applied to characterize the dynamics of methyl groups of methyl fluoride guest molecules in cubic I CH3F-water clathrate. Only above T approximately 60 K quasielastic spectra are unaffected by quantum effects. They are well described by two Lorentzians representing the CH3F species in the small and large cages of the structure. The intensities show that both cages are completely filled. The linear broadenings with temperature follow the model of rotational diffusion. Two clearly separated tunneling bands were observed at T = 4.2 K and are also assigned to the two types of water cages. Disorder of the environment (H-bonds) is reflected in the shape of the bands. For the less hindered species housing the large cages the tunneling band can be quantitatively converted into a potential distribution function within the model of single particle rotation. Transitions to excited rotational states show the dominance of a sixfold potential term V6 = 13 meV modified by a weak threefold term distributed around a characteristic value V3 = 0.9 meV. The potential distribution of V3 influences the barrier for classical reorientation only weakly in agreement with the results from quasielastic data. Adsorption sites with the guest molecules oriented towards a hydrogen bond along one of twelve local twofold axes of the cage are proposed. Such sites are consistent with the sixfold rotational potential and earlier results from methyl iodide clathrate. Rotation-translation coupling as an alternative dynamical process is excluded.
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We report a reversible liquid-solid transition upon heating of a simple solution composed of a-cyclodextrine (alpha CD), water, and 4-methylpyridine. These solutions are homogeneous and transparent at ambient temperature and solidify when heated to temperatures between 45 degrees and 75 degrees. Quasielastic and elastic neutron scattering show that molecular motions are slowed down in the solid and that crystalline order is established. The solution "freezes on heating." This process is fully reversible, on cooling the solid melts. A rearrangement of hydrogen bonds is postulated to be responsible for the observed phenomenon.
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Picolinas/química , Água/química , alfa-Ciclodextrinas/química , Cristalização , Ligação de Hidrogênio , Difração de Nêutrons , Transição de Fase , Soluções , TermodinâmicaRESUMO
The low temperature rotational dynamics of methyl groups in 4-methylpyridine is analyzed in terms of a model potential including rotation-libration and rotor-rotor coupling. The parameters of the model potential are adjusted by comparison of calculated with published and newly recorded inelastic neutron scattering spectra. Initial evaluations of the potential parameters of the model are obtained from molecular mechanics calculations. Experimental spectra are calculated from these potentials by numerical solution of Schrödinger's equation for clusters of coupled rotors embedded in a bigger ensemble of rotors treated in the mean field approximation. Adjustment of the potential parameters leads to excellent agreement with the experimental spectra of protonated 4-methylpyridine, measured at well-defined spin temperatures. At higher levels of deuteration, agreement with experiment is qualitative, only. The observed deviations are attributed to the increasing frustration of the system of coupled methyl groups and mutual localization, effects leading to a phase transition around 5.5 K in isotopic mixtures, as shown in diffraction experiments.