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1.
J Microbiol Methods ; 107: 23-9, 2014 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-25193441

RESUMO

Using combined confocal laser scanning and atomic force microscopy (CLSM/AFM), bacterial viability under organic solvent stress was assessed at single cell level. Solvent-exposed bacteria stained with the LIVE/DEAD BacLight fluoresced green or red, allowing viable and dead cell discrimination. However, with toluene, butanol and acetonitrile, dually fluorescent cells appeared having compromised cell membranes. Changes in size, surface/volume ratio and roughness were revealed as possible resistance mechanisms.


Assuntos
Bactérias/efeitos dos fármacos , Microscopia de Força Atômica , Microscopia Confocal , Compostos Orgânicos/farmacologia , Solventes/farmacologia , Viabilidade Microbiana/efeitos dos fármacos , Microscopia de Força Atômica/métodos , Microscopia Confocal/métodos
2.
J Microbiol Methods ; 94(2): 135-140, 2013 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-23747656

RESUMO

A method of simultaneous species-specific PCR detection and viability testing of poly(vinyl alcohol) cryogel-entrapped Rhodococcus spp. was developed that allowed the estimation of immobilized Rhodococcus opacus and Rhodococcus ruber survival after their exposure to petroleum hydrocarbon mixture. Spectrophotometric INT assay revealed high tolerance of gel-immobilized rhodococci to petroleum hydrocarbons, while among two Rhodococcus strains studied, R. ruber tolerated better to hydrocarbons compared to R. opacus. These findings were confirmed by respirometry results that showed increased respiratory activity of gel-immobilized Rhodococcus strains after 10-day incubation with 3% (v/v) petroleum hydrocarbon mixture. Moreover, jointly incubated rhodococcal strains demonstrated higher oxidative activities toward petroleum hydrocarbons than individual strains. Both Rhodococcus species were recovered successfully in cryogel granules using 16S rDNA-targeted PCR, even though the granules were previously stained with INT and extracted with ethanol. The method developed can be used for rapid detection and monitoring of gel-immobilized bacterial inocula in bioreactors or contaminated soil systems.


Assuntos
Hidrocarbonetos/farmacologia , Petróleo/metabolismo , Reação em Cadeia da Polimerase/métodos , Rhodococcus/crescimento & desenvolvimento , Rhodococcus/isolamento & purificação , Células Imobilizadas/química , Células Imobilizadas/classificação , Células Imobilizadas/efeitos dos fármacos , Hidrocarbonetos/metabolismo , Viabilidade Microbiana/efeitos dos fármacos , Álcool de Polivinil/química , Rhodococcus/efeitos dos fármacos , Rhodococcus/genética , Especificidade da Espécie
3.
J Microbiol Methods ; 79(1): 76-81, 2009 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-19682505

RESUMO

A method for selective adsorption of Rhodococcus cells in the column with hydrophobized poly(acrylamide) cryogel (cryoPAAG) was developed that allowed rhodococci separation from mixed bacterial populations and their effective concentration within a sponge-like gel matrix. Hydrophobization of cryoPAAG using the n-dodecane graft (C12) was performed to enhance the adhesion of Rhodococcus cells to the cryogel; this was suggested by our finding that alkanotrophic rhodococci possess high adhesive activity (91-98%) towards n-alkanes, whereas other Gram-positive and Gram-negative bacteria tested did not adhere strongly to hydrocarbons. The selective index of the hydrophobic C12-cryoPAAG column for Rhodococcus cells was 72% that ensured their separation from complex bacterial cultures. Respirometry results using the Columbus Micro-Oxymax respirometer showed that the maximal respiratory activity of C12-cryoPAAG-immobilized Rhodococcus cells incubated with petroleum hydrocarbons was 1.6-1.8 times higher than that of freely suspended cells, and this correlated with the largest immobilized cell number. Moreover, high respiration rates were maintained over 3 weeks of incubation, indicating a considerable functional stability of the cryoPAAG-immobilized biocatalyst developed.


Assuntos
Resinas Acrílicas/química , Hidrocarbonetos/metabolismo , Hidrogéis/química , Rhodococcus/isolamento & purificação , Rhodococcus/metabolismo , Adsorção , Técnicas Bacteriológicas/métodos , Criogéis , Oxirredução
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