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1.
Sci Rep ; 14(1): 6677, 2024 03 20.
Artigo em Inglês | MEDLINE | ID: mdl-38509217

RESUMO

The hyperarid mangrove in the Middle East is characterised by the absence of rivers or freshwater inputs and is one of the most extreme settings of this ecosystem on Earth. Endemic to Qatar's hyperarid mangroves, a Palaemon shrimp is uniquely confined to a sole mangrove site in the Arabian Gulf. Within these mangrove channels, we unveiled brine groundwater sources exceeding 70 ppt salinity, contrasting the local marine standard of 42 ppt. Concurrently, a mysid species typically linked to salt pans and groundwater coexists. Stable isotopic analysis implied the existence of a predator-prey dynamic between this mysid species and the studied shrimp. Then, investigating the endemic shrimp's adaptation to extreme salinity, we conducted osmolarity experiments and phylogenetic studies. Our findings demonstrate that this shrimp transitions from hypo- to hyper-osmoregulation, tolerating salinities from 18 to 68 ppt-an unprecedented osmoregulatory capacity among caridean shrimps. This speciation pattern likely arises from the species osmolarity adaptation, as suggested for other Palaemon congeners. Phylogenetic analysis of the studied Palaemon, along with the mangrove's geological history, suggests a profound evolutionary interplay between the ecosystem and the shrimp since the Eocene. This study proposes the hyperarid mangrove enclave as an Athalassic mangrove oasis-a distinctive, isolated ecosystem within the desert landscape.


Assuntos
Osmorregulação , Palaemonidae , Animais , Ecossistema , Filogenia , Equilíbrio Hidroeletrolítico , Concentração Osmolar , Palaemonidae/fisiologia
2.
Zookeys ; 1179: 169-196, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-37731535

RESUMO

A new freshwater crab of the potamid genus Candidiopotamon Bott, 1967, is described from eastern Taiwan. Candidiopotamonpenglai sp. nov. is morphologically similar to C.rathbuni (De Man, 1914) from western Taiwan, but can be distinguished by the morphology of the male first gonopod (G1), as well as by their mitochondrial DNA (16S rRNA and COI genes). In the G1 of C.rathbuni, the subterminal segment shows a cline from robust in northern populations to slender in southern populations. In the G1 of C.penglaisp. nov., a distinctly larger and more distally directed keel-like projection is found on the distal inner edge of the terminal segment, with northern populations having an inward-curving subterminal segment and southern populations a straight subterminal segment. The genetic differentiation of the two species of Candidiopotamon within Taiwan is discussed, and morphological differences are compared. A key to the species of Candidiopotamon is also provided.

3.
Zootaxa ; 5336(4): 567-576, 2023 Aug 24.
Artigo em Inglês | MEDLINE | ID: mdl-38221075

RESUMO

A new species of Parasesarma, P. rahayuae n. sp., is described from Sulawesi, Indonesia. Genetically, the new species is distinct from all other known species of Parasesarma and has a close phylogenetic relationship with P. anambas Yeo, Rahayu & Ng, 2004 and P. gemmatum Li, Shih & Ng, 2019. Morphologically, the new species most closely resembles P. anambas and P. gemmatum, but can be distinguished from these two species by the shape of the dactylar tubercles of the male chela and of the male first gonopod. This is the fourth species of Parasesarma recorded from Sulawesi, and with its description, the number of species assigned to the genus Parasesarma is 58.


Assuntos
Braquiúros , Cipriniformes , Humanos , Masculino , Animais , Indonésia , Filogenia
4.
Zool Stud ; 61: e67, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-36568815

RESUMO

Most fiddler crabs have an extended planktonic larval phase, potentially maintaining gene flow among widely separated populations, in the absence of marine barriers. Such marine barriers could be long coastal stretches without suitable habitat, freshwater plumes caused by large river mouths, or strong currents. Typically, fiddler crabs inhabit mangrove habitats, and as mangroves tend to have a patchy distribution, it is important to gather information on the connectivity between neighboring mangroves and recognize local endemisms. To detect potential genetic differentiation among mangrove-dwelling populations of Leptuca thayeri and Uca maracoani along several thousand kilometers of a tropical coastline, mtDNA sequences of different populations from Brazil and two Caribbean islands were analyzed and compared. As shown in previous studies with fiddler crabs, Brazilian populations are genetically indiscernible, and our data suggest the absence of long-standing gene flow barriers in the two studied species along the Brazilian coast. This includes both sides of the postulated biogeographic barriers corresponding to the split of the Central South Equatorial Current and to the Amazon River freshwater plume. In contrast, conspecific individuals from the Greater Antilles carried different haplotypes, suggesting a biogeographical barrier between Brazil and the Caribbean, apparently having limited gene flow between both regions for extended time periods.

5.
Mol Phylogenet Evol ; 177: 107596, 2022 12.
Artigo em Inglês | MEDLINE | ID: mdl-35914646

RESUMO

The Thoracotremata is a large and successful group of "true" crabs (Decapoda, Brachyura, Eubrachyura) with a great diversity of lifestyles and well-known intertidal representatives. The group represents the largest brachyuran radiation into terrestrial and semi-terrestrial environments and comprises multiple lineages of obligate symbiotic species. In consequence, they exhibit very diverse physiological and morphological adaptations. Our understanding of their evolution is, however, largely obscured by their confused classification. Here, we resolve interfamilial relationships of Thoracotremata, using 10 molecular markers and exemplars from all nominal families in order to reconstruct the pathways of lifestyle transition and to prepare a new taxonomy corresponding to phylogenetic relationships. The results confirm the polyphyly of three superfamilies as currently defined (Grapsoidea, Ocypodoidea and Pinnotheroidea). At the family level, Dotillidae, Macrophthalmidae, and Varunidae are not monophyletic. Ancestral state reconstruction analyses and divergent time estimations indicate that the common ancestor of thoracotremes already thrived in intertidal environments in the Late Cretaceous and terrestrialization became a major driver of thoracotreme diversification. Multiple semi-terrestrial and terrestrial lineages originated and radiated in the Early Eocene, coinciding with the global warming event at the Paleocene-Eocene Thermal Maximum (PETM). Secondary invasions into subtidal regions and colonizations of freshwater habitats occurred independently through multiple semi-terrestrial and terrestrial lineages. Obligate symbiosis between thoracotremes and other marine macro-invertebrates evolved at least twice. On the basis of the current molecular phylogenetic hypothesis, it will be necessary in the future to revise and recognize seven monophyletic superfamilies and revisit the morphological character states which define them.


Assuntos
Braquiúros , Animais , Braquiúros/genética , Ecossistema , Água Doce , Humanos , Filogenia , Simbiose/genética
6.
Genes (Basel) ; 13(2)2022 02 04.
Artigo em Inglês | MEDLINE | ID: mdl-35205344

RESUMO

Metopaulias depressus is a non-marine crab endemic to Jamaica that dwells in rainforest bromeliads and exhibits elaborate active parental care behavior. Current genomic resources on M. depressus are rare, limiting the understanding of its adaptation to terrestrial life in species that evolved from marine ancestors. This study reports the complete mitochondrial genome of M. depressus assembled using Sanger sequencing. The AT-rich mitochondrial genome of M. depressus is 15,765 bp in length and comprises 13 protein-coding genes (PCGs), 2 ribosomal RNA genes, and 22 transfer RNA genes. A single 691 bp-long intergenic space is assumed to be the control region (CR) or D-loop. A set of selective pressure analyses indicate that the entirety of the PCGs experience purifying selection. Cox1, cox2, nad5, cox3, and atp6 experience strong purifying selection, and atp8 experiences weak purifying selection compared to the rest of the PCGs. The secondary structures of most tRNA genes exhibit a standard 'cloverleaf' structure, with the exception of trnS1, which lacks the dihydroxyuridine (DHU) arm but not the loop, the trnH gene, which lacks the thymine pseudouracil cytosine (T) loop but not the arm, and trnM, which exhibits an overly developed T loop. A maximum likelihood phylogenetic analysis based on all PCGs indicated that M. depressus is more closely related to the genera Clistocoeloma, Nanosesarma, and Parasesarma than to Chiromantes, Geosesarma, and Orisarma. This study contributes to deciphering the phylogenetic relationships within the family Sesarmidae and represents a new genomic resource for this iconic crab species.


Assuntos
Braquiúros , Genoma Mitocondrial , Animais , Braquiúros/genética , Genoma Mitocondrial/genética , Genômica , Filogenia , RNA de Transferência/genética
7.
PLoS One ; 17(1): e0262122, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-35025933

RESUMO

Due to the lack of visible barriers to gene flow, it was a long-standing assumption that marine coastal species are widely distributed, until molecular studies revealed geographically structured intraspecific genetic differentiation in many taxa. Historical events of sea level changes during glacial periods are known to have triggered sequential disjunctions and genetic divergences among populations, especially of coastal organisms. The Parasesarma bidens species complex so far includes three named plus potentially cryptic species of estuarine brachyuran crabs, distributed along East to Southeast Asia. The aim of the present study is to address phylogeography and uncover real and hidden biological diversity within this complex, by revealing the underlying genetic structure of populations and species throughout their distribution ranges from Japan to West Papua, with a comparison of mitochondrial COX1 and 16S rRNA gene sequences. Our results reveal that the P. bidens species complex consists of at least five distinct clades, resulting from four main cladogenesis events during the mid to late Pleistocene. Among those clades, P. cricotum and P. sanguimanus are recovered as monophyletic taxa. Geographically restricted endemic clades are encountered in southeastern Indonesia, Japan and China respectively, whereas the Philippines and Taiwan share two clades. As individuals of the Japanese clade can also be found in Taiwan, we provide evidence of a third lineage and the occurrence of a potential cryptic species on this island. Ocean level retreats during Pleistocene ice ages and present oceanic currents appear to be the main triggers for the divergences of the five clades that are here addressed as the P. bidens complex. Secondary range expansions converted Taiwan into the point of maximal overlap, sharing populations with Japan and the Philippines, but not with mainland China.


Assuntos
Biodiversidade , Braquiúros/classificação , Animais , Braquiúros/genética , China , Complexo IV da Cadeia de Transporte de Elétrons/química , Complexo IV da Cadeia de Transporte de Elétrons/genética , Fósseis/história , Genética Populacional , História Antiga , Indonésia , Japão , Filipinas , Filogenia , Filogeografia , RNA Ribossômico 16S/química , RNA Ribossômico 16S/genética , RNA Ribossômico 16S/metabolismo , Análise de Sequência de DNA , Taiwan
8.
Biology (Basel) ; 12(1)2022 Dec 24.
Artigo em Inglês | MEDLINE | ID: mdl-36671728

RESUMO

The American blue crab Callinectes sapidus is a particularly successful invader in estuarine ecosystems worldwide. Despite increasing awareness of its potential harm, the invasion history and underlying genetic diversity of this species within the Mediterranean Sea remain unknown. This study constitutes the first large-scale approach to study phylogeographic patterns of C. sapidus in Europe, facilitated by the first comparison of all currently available COI sequence data. For this investigation, 71 individuals of C. sapidus were newly analyzed and the entire COI gene was sequenced and used for a comparative phylogeographic analyses. For the first time, two separately used adjacent regions of this gene were combined in a single dataset. This allowed emphasizing the prevalence of three geographically defined lineages within the native range: (1) eastern North America, including the Gulf of Mexico, (2) the Caribbean, and (3) Brazil. New data from the Mediterranean reveal that non-native populations of C. sapidus are characterized by a conspicuously low genetic diversity (except for Turkey, where stocking took place), and that there is surprisingly low connectivity among established populations. The occurrence of strong genetic bottlenecks suggests few founder individuals. This confirms that, even under a scenario of restricted large-scale gene flow, a very limited number of invasive individuals is sufficient for a massive impact.

9.
Zootaxa ; 4816(4): zootaxa.4816.4.2, 2020 Jul 20.
Artigo em Inglês | MEDLINE | ID: mdl-33055683

RESUMO

Two new species of Leptarma, L. dispersum n. sp. and L. reunionense n. sp. are described from Europa Island and Réunion Island, respectively. Genetically, based on the mitochondrial COX1 gene, both species are markedly divergent from other congeneric species. Phylogenetically, L. dispersum n. sp. shows close relationship with L. lenzii (De Man, 1895) while L. reunionense n. sp. clusters with L. aurifrons (Li, Ng Shih, 2019) and the species pair L. moluccense (De Man, 1892) and L. paucitorum (Rahayu Ng, 2009). Morphologically, the new species differ most significantly from congeners by the relative length of the ambulatory legs and the shapes of the first gonopods and carapace. After the description of these two new species, the number of species comprised in the genus Leptarma is raised to 20, four of them being distributed in and off East Africa.


Assuntos
Braquiúros , Animais , Oceano Índico , Filogenia
10.
Zootaxa ; 4803(2): zootaxa.4803.2.12, 2020 Jun 26.
Artigo em Inglês | MEDLINE | ID: mdl-33056027

RESUMO

The occurrence of Parasesarma cricotum (Rahayu Davie, 2002) in Palau and Sulawesi is reported after the examination of several male and female specimens collected from Sulawesi, Indonesia, and Palau. The present record from Palau, has extended the distribution of P. cricotum considerably further northeast of its natural distribution range.


Assuntos
Braquiúros , Animais , Feminino , Indonésia , Masculino , Palau
11.
BMC Evol Biol ; 19(1): 105, 2019 05 17.
Artigo em Inglês | MEDLINE | ID: mdl-31101005

RESUMO

BACKGROUND: The Pleistocene cyclic sea-level fluctuations are thought to have markedly affected the distribution and genetic architecture of Atlanto-Mediterranean biota. Despite the acknowledged key role played by these historical events in shaping population genetic structure of marine species, little is still known about the processes involved in shaping the spatial distribution of genetic variation within intertidal species. We intended in this study to reconstruct the phylogeography of a common and widely distributed coastal species across the East Atlantic and Mediterranean Sea (the warty crab Eriphia verrucosa), aiming to unravel potential microevolutionary processes likely involved in shaping its genetic polymorphism. For this purpose, a total of 155 specimens of E. verrucosa from 35 locations across the entire distribution range were analyzed by comparing a 453 basepairs region of the mitochondrial gene cytochrome oxidase subunit 1 (Cox1). RESULTS: Our results unveiled the prevalence of high genetic connectivity among East Atlantic and Mediterranean populations, with noticeable genetic distinctiveness of the peripheral population from the Azores. Spatio-temporal patterns of genetic diversification and demographic history allowed retrieving genetic imprints of late Pleistocene vicariant event across the Gibraltar Strait followed by subsequent postglacial expansion events for both the East Atlantic and Mediterranean regions. Integrative evidences from the outcomes of comparison of regional genetic diversification, as well as evolutionary and biogeographic histories reconstructions, support the existence of potential glacial refugia for E. verrucosa in the East Atlantic and western Mediterranean. Our results also revealed low levels of genetic variability along with recent demographic and spatial expansion events for eastern Mediterranean warty crabs, suggesting that the eastern areas within the distribution range of the species might have been recently colonized from putative glacial refugia. CONCLUSIONS: These findings provide new insights into the phylogeography and evolutionary history of a common but poorly studied Atlanto-Mediterranean decapod species. Specifically, they contribute to the understanding of the impact of historical processes on shaping contemporary population genetic structure and diversity in intertidal marine species.


Assuntos
Braquiúros/genética , Camada de Gelo , Filogenia , Filogeografia , Refúgio de Vida Selvagem , Animais , Sequência de Bases , Teorema de Bayes , Complexo IV da Cadeia de Transporte de Elétrons/genética , Variação Genética , Gibraltar , Haplótipos/genética , Mar Mediterrâneo , Fatores de Tempo
12.
Ecol Evol ; 9(8): 4749-4759, 2019 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-31031941

RESUMO

Refugia are critical for the maintenance of biodiversity during the periods of Quaternary climatic oscillations. The long-term persistence of refugial populations in a large continuous refugium has resulted in a homogenous pattern of genetic structure among populations, while highly structured evolutionary lineages characterize the restriction of refugial populations to smaller subrefugia. These mechanisms have resulted in the identification of hot spots of biodiversity within putative glacial refugia. We studied phylogeography of Potamon ibericum (Brachyura: Potamidae) in the drainages of the western Caucasus biodiversity hot spot (i.e., Colchis and the Caucasus) to infer spatial genetic structure and potential refugia for a freshwater crab in this region. These areas have traditionally considered as a refugium due to the presence of Tertiary relict species. We integrated population genetic data and historical demographic analysis from cytochrome oxidase subunit I sequences and paleoclimatic data from species distribution modeling (SDM). The results revealed the lack of phylogeographic structure and provided evidence for demographic expansion. The SDM presented a rather homogenous and large refugium that extended from northeast Turkey to Colchis during the last glacial period. In contrast to these findings, previous phylogeographic study on P. ibericum of the eastern Caucasus biodiversity hot spot (i.e., Hyrcania) identified multiple independent refugia. By combining these results, we explain the significance of this important western Palearctic hot spot of biological diversity in shaping the geographic distribution of intraspecific genetic diversity in a freshwater taxon.

13.
Ecol Evol ; 9(4): 1957-1971, 2019 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-30847085

RESUMO

Crayfish can be used as model organisms in phylogeographic and divergence time studies if reliable calibrations are available. This study presents a comprehensive investigation into the phylogeography of the European stone crayfish (Austropotamobius torrentium) and includes samples from previously unstudied sites. Two mitochondrial markers were used to reveal evolutionary relationships among haplogroups throughout the species' distributional range and to estimate the divergence time by employing both substitution rates and geological calibration methods. Our haplotype network reconstruction and phylogenetic analyses revealed the existence of a previously unknown haplogroup distributed in Romania's Apuseni Mountains. This haplogroup is closely related to others that are endemic in the Dinarides, despite their vast geographical separation (~600 km). The separation is best explained by the well-dated tectonic displacement of the Tisza-Dacia microplate, which started in the Miocene (~16 Ma) and possibly carried part of the A. torrentium population to the current location of the Apuseni Mountains. This population may thus have been isolated from the Dinarides for a period of ca. 11 m.y. by marine and lacustrine phases of the Pannonian Basin. The inclusion of this geological event as a calibration point in divergence time analyses challenges currently accepted crayfish evolutionary time frames for the region, constraining the evolution of this area's crayfish to a much earlier date. We discuss why molecular clock calibrations previously employed to date European crayfish species divergences should therefore be reconsidered.

14.
Zool Stud ; 58: e21, 2019.
Artigo em Inglês | MEDLINE | ID: mdl-31966322

RESUMO

Parasesarma liho Koller, Liu & Schubart, 2010 and P. cognatum Rahayu & Li, 2013 from East and Southeast Asia are similar species that have been confused in several studies. Here, we re-examined the type specimens of both species and found identical main characters, which is supported by the molecular identity of the mitochondrial cytochrome oxidase subunit I gene. As a result, we treat P. cognatum as a junior subjective synonym of P. liho. We also show that the male paratype of P. paucitorum Rahayu & Ng, 2009 is conspecific with P. liho, although P. paucitorum s. str. remains a distinct but allied species. The distribution of P. liho is updated to include Japan (Ryukyus), Taiwan, Philippines (Cebu) and Indonesia (Sulawesi).

15.
BMC Evol Biol ; 18(1): 53, 2018 04 11.
Artigo em Inglês | MEDLINE | ID: mdl-29642852

RESUMO

BACKGROUND: Recently, population genetic studies of Mediterranean marine species highlighted patterns of genetic divergence and phylogeographic breaks, due to the interplay between impacts of Pleistocene climate shifts and contemporary hydrographical barriers. These factors markedly shaped the distribution of marine organisms and their genetic makeup. The present study is part of an ongoing effort to understand the phylogeography and evolutionary history of the highly dispersive Mediterranean green crab, Carcinus aestuarii (Nardo, 1847), across the Mediterranean Sea. Recently, marked divergence between two highly separated haplogroups (genetic types I and II) of C. aestuarii was discerned across the Siculo-Tunisian Strait, suggesting an Early Pleistocene vicariant event. In order to better identify phylogeographic patterns in this species, a total of 263 individuals from 22 Mediterranean locations were analysed by comparing a 587 basepair region of the mitochondrial gene Cox1 (cytochrome oxidase subunit 1). The examined dataset is composed of both newly generated sequences (76) and previously investigated ones (187). RESULTS: Our results unveiled the occurrence of a highly divergent haplogroup (genetic type III) in the most north-eastern part of the Mediterranean Sea. Divergence between the most distinct type III and the common ancestor of both types I and II corresponds to the Early Pleistocene and coincides with the historical episode of separation between types I and II. Our results also revealed strong genetic divergence among adjacent regions (separating the Aegean and Marmara seas from the remaining distribution zone) and confirmed a sharp phylogeographic break across the Eastern Mediterranean. The recorded parapatric genetic divergence, with the potential existence of a contact zone between both groups in the Ionian Sea and notable differences in the demographic history, suggest the likely impact of paleoclimatic events, as well as past and contemporary oceanographic processes, in shaping genetic variability of this species. CONCLUSIONS: Our findings not only provide further evidence for the complex evolutionary history of the green crab in the Mediterranean Sea, but also stress the importance of investigating peripheral areas in the species' distribution zone in order to fully understand the distribution of genetic diversity and unravel hidden genetic units and local patterns of endemism.


Assuntos
Braquiúros/classificação , Braquiúros/genética , Animais , Evolução Biológica , Ciclo-Oxigenase 1/genética , DNA Mitocondrial/genética , Deriva Genética , Variação Genética , Mar Mediterrâneo , Filogenia , Filogeografia , Análise de Sequência de DNA
16.
Zootaxa ; 4242(1): 161-173, 2017 Mar 09.
Artigo em Inglês | MEDLINE | ID: mdl-28610199

RESUMO

A new species of freshwater crab of the genus Sudanonautes Bott, 1955, is described from the tropical rainforests of Edea and Tiko in southern Cameroon, Central Africa. Sudanonautes tiko n. sp. is recognized by a unique combination of characters of the carapace, thoracic sternum, chelipeds, and male first gonopod, and by distinct mtDNA sequences for two loci (COI and 16S rRNA). A diagnosis, illustrations, and a tree of phylogenetic relationships based on mtDNA sequences are provided, along with a comparison to similar species from the region. Brief notes are provided on the ecology of the new species and of three other species of Sudanonautes collected during this study.


Assuntos
Braquiúros , Animais , Camarões , Água Doce , Masculino , Filogenia , RNA Ribossômico 16S
17.
Biol Bull ; 232(1): 30-44, 2017 02.
Artigo em Inglês | MEDLINE | ID: mdl-28445089

RESUMO

The genetic and morphometric population structures of the semiterrestrial crab Armases angustipes from along the Brazilian coast were examined. The influence of the Central South Equatorial Current on larval dispersal of A. angustipes also was evaluated. Six populations were sampled from estuarine areas in São Luis do Maranhão, Maranhão; Natal, Rio Grande do Norte; Maceió, Alagoas; Ilhéus, Bahia; Aracruz, Espírito Santo; and Guaratuba, Paraná. Patterns of genetic differentiation were assessed using DNA sequence data corresponding to parts of the mitochondrial cytochrome c oxidase subunit 1. Geometric morphometric techniques were used to evaluate morphological variation in shape and size of the carapace and right cheliped propodus. Our results revealed low genetic variability and lack of phylogeographic structure; geometric morphometrics showed statistically significant morphological differentiation and geographic structuring. Our data indicate the absence of possible barriers to gene flow for this mobile species, and no clear correlation of morphological or genetic variation with ocean currents and/or geographic distance. Our results also suggest that historical geological and climatological events and/or possible bottleneck effects influenced the current low genetic variability among the populations of A. angustipes.


Assuntos
Braquiúros/anatomia & histologia , Braquiúros/genética , Variação Genética , Animais , Braquiúros/classificação , Brasil , Complexo IV da Cadeia de Transporte de Elétrons/genética , Fluxo Gênico , Genética Populacional , Filogeografia , Dinâmica Populacional , Especificidade da Espécie , Movimentos da Água
18.
Mol Ecol Resour ; 17(6): 1293-1307, 2017 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-28449274

RESUMO

Mayflies, stoneflies and caddisflies (Ephemeroptera, Plecoptera and Trichoptera) are prominent representatives of aquatic macroinvertebrates, commonly used as indicator organisms for water quality and ecosystem assessments. However, unambiguous morphological identification of EPT species, especially their immature life stages, is a challenging, yet fundamental task. A comprehensive DNA barcode library based upon taxonomically well-curated specimens is needed to overcome the problematic identification. Once available, this library will support the implementation of fast, cost-efficient and reliable DNA-based identifications and assessments of ecological status. This study represents a major step towards a DNA barcode reference library as it covers for two-thirds of Germany's EPT species including 2,613 individuals belonging to 363 identified species. As such, it provides coverage for 38 of 44 families (86%) and practically all major bioindicator species. DNA barcode compliant sequences (≥500 bp) were recovered from 98.74% of the analysed specimens. Whereas most species (325, i.e., 89.53%) were unambiguously assigned to a single Barcode Index Number (BIN) by its COI sequence, 38 species (18 Ephemeroptera, nine Plecoptera and 11 Trichoptera) were assigned to a total of 89 BINs. Most of these additional BINs formed nearest neighbour clusters, reflecting the discrimination of geographical subclades of a currently recognized species. BIN sharing was uncommon, involving only two species pairs of Ephemeroptera. Interestingly, both maximum pairwise and nearest neighbour distances were substantially higher for Ephemeroptera compared to Plecoptera and Trichoptera, possibly indicating older speciation events, stronger positive selection or faster rate of molecular evolution.


Assuntos
Código de Barras de DNA Taxonômico/métodos , Bases de Dados Genéticas , Ephemeroptera/classificação , Ephemeroptera/genética , Holometábolos/classificação , Holometábolos/genética , Animais , Alemanha
19.
Zootaxa ; 4231(2): zootaxa.4231.2.9, 2017 Feb 09.
Artigo em Inglês | MEDLINE | ID: mdl-28187543

RESUMO

The rare and endangered Cameroonian potamonautid freshwater crab Louisea edeaensis (Bott, 1969) was recently rediscovered during a biological inventory of the freshwater decapods of southern Cameroon. The previous record dated back more than 100 years. The new specimens allow an updated diagnosis of the species based on comparisons of important taxonomic characters. Photographs of the carapace, gonopods, third maxillipeds, and chelipeds of the largest adult male specimen from Lake Ossa, Cameroon are provided, as are the first photographs of living specimens. The conservation implications of the new data on habitat, population structure, distribution, and threats for this rare and endangered species are discussed.


Assuntos
Braquiúros , Animais , Camarões , Ecologia , Ecossistema , Espécies em Perigo de Extinção , Masculino
20.
Arthropod Struct Dev ; 46(2): 274-286, 2017 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-28062354

RESUMO

Because of the poor knowledge of the morphology of the female reproductive organs of most brachyuran crabs, this study investigated two Atlantic representatives of the family Leucosiidae, Ilia nucleus (Linnaeus, 1758) and Persephona mediterranea (Herbst, 1794), using histological methods and magnetic resonance imaging (MRI). While the vagina conforms to the concave type, the arrangement of the two chambers of the seminal receptacle differs strongly from that of other eubrachyuran sperm storage organs. Both chambers are oriented laterally within the crab's body. This is in contrast to the dorso-ventral orientation described in most other known brachyuran crabs. The lateral chamber is covered by cuticle, whereas the medial chamber is covered by a holocrine glandular epithelium. The oviduct connection is located ventrally, posterior to the vagina. The oviduct orifice is characterized by a transition from the epithelium lining the oviduct to the seminal receptacle's holocrine glandular epithelium. Moreover, muscle fibres are attached to the oviduct orifice and to the sternal cuticle. This musculature can be interpreted as an important feature in the fertilization and egg-laying process by supporting and controlling the inflow of eggs into the seminal receptacle lumen. The results of this study are compared to the morphology of the seminal receptacle of another leucosiid crab, Ebalia tumefacta (Montagu, 1808), and to those of other known eubrachyuran crabs.


Assuntos
Braquiúros/citologia , Animais , Feminino , Genitália Feminina/citologia , Imageamento por Ressonância Magnética , Especificidade da Espécie
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