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1.
Phys Chem Chem Phys ; 26(23): 16625-16636, 2024 Jun 12.
Artigo em Inglês | MEDLINE | ID: mdl-38808366

RESUMO

In recent times, considerable attention has been given to examining the impact of micro/nanostructure on the thermoelectric characteristics of nonstoichiometric AgSbTe2. The present investigation employed direct melting of elements that produced p-type AgSbTe2 with spontaneous nanostructuring due to cation ordering. The product predominantly features an Ag-deficient Ag0.927Sb1.07Te2.005 phase with monoclinic Ag2Te nanoprecipitates and exhibits a degenerate semiconductor-like behavior with an energy band gap of 0.15 eV. A Seebeck coefficient of 251 µV K-1 and a power factor of 741 µW m-1 K-2 at near ambient temperature are attained with this composition. The variable range hopping (VRH) and linear magnetoresistance (LMR) confirmed that the low-temperature transport followed a VRH between the localized states. The composition also exhibited glass like thermal conductivity of 0.2 W m-1 K-1 arising from phonon scattering at all-scale hierarchical structures that led to a high ZT of 1.1 at room temperature. The direct melted ingots show a high relative density of ∼97%, Vickers hardness Hv of ∼108.5 kgf mm-2, and excellent thermal stability, making them an attractive choice for TEGs.

2.
Biosens Bioelectron ; 258: 116358, 2024 Aug 15.
Artigo em Inglês | MEDLINE | ID: mdl-38718634

RESUMO

Wearable sensors for sweat glucose monitoring are gaining massive interest as a patient-friendly and non-invasive way to manage diabetes. The present work offers an alternative on-body method employing an all-printed flexible electrochemical sensor to quantify the amount of glucose in human sweat. The working electrode of the glucose sensor was printed using a custom-formulated ink containing multi-walled carbon nanotube (MWCNT), poly (3,4-ethylenedioxythiophene) polystyrene sulfonate (PEDOPT: PSS), and iron (II, III) oxide (Fe3O4) nanoparticles. This novel ink composition has good conductivity, enhanced catalytic activity, and excellent selectivity. The working electrode was modified using Prussian blue (PB) nanoparticles and glucose oxidase enzyme (GOx). The sensor displayed a linear chronoamperometric response to glucose from 1 µM to 400 µM, with a precise detection limit of ∼0.38 µM and an impressive sensitivity of ∼4.495 µAµM-1cm-2. The sensor stored at 4 °C exhibited excellent stability over 60 days, high selectivity, and greater reproducibility. The glucose detection via the standard addition method in human sweat samples acquired a high recovery rate of 96.0-98.6%. Examining human sweat during physical activity also attested to the biosensor's real-time viability. The results also show an impressive correlation between glucose levels obtained from a commercial blood glucose meter and sweat glucose concentrations. Remarkably, the present results outperform previously published printed glucose sensors in terms of detection range, low cost, ease of manufacturing, stability, selectivity, and wearability.


Assuntos
Técnicas Biossensoriais , Glucose Oxidase , Glucose , Limite de Detecção , Nanocompostos , Nanotubos de Carbono , Suor , Dispositivos Eletrônicos Vestíveis , Humanos , Técnicas Biossensoriais/instrumentação , Nanotubos de Carbono/química , Suor/química , Nanocompostos/química , Glucose/análise , Glucose Oxidase/química , Tinta , Técnicas Eletroquímicas , Compostos Férricos/química , Ferrocianetos/química , Polímeros/química , Reprodutibilidade dos Testes , Compostos Bicíclicos Heterocíclicos com Pontes/química , Poliestirenos
3.
Phys Chem Chem Phys ; 26(18): 13773-13789, 2024 May 08.
Artigo em Inglês | MEDLINE | ID: mdl-38655720

RESUMO

In the present investigation, we present the comparison of the structural, magnetic, magnetocaloric and magnetoresistance behavior of solid state and sol-gel derived La0.7Sr0.3MnO3. X-ray diffraction together with Rietveld refinement confirms the rhombohedral structure of the synthesised samples with the R3̄c space group. The ferromagnetic-to-paramagnetic transition temperature decreases from 360 K to 346 K for the nanocrystalline sample. The XPS measurements confirm the presence of Mn3+ in the synthesised samples. Furthermore, the polycrystalline sample exhibits a considerable -ΔSM of 4.68 J kg-1 K-1 at 360 K for a field change of 50 kOe and a relative cooling power (RCP) of 205 J kg-1. A -ΔSM of 1.14 J kg-1 K-1 was obtained for the nanocrystalline sample at 346 K with an RCP of 83 J kg-1. Critical exponent analysis has also been performed on both samples to establish the universality class. Both samples exhibit a distinct metal-to-insulator transition, which increases with grain size from 187 K to 334 K as a result of grain growth and decreased grain boundary. As the grain size increases, the resistivity decreases and shifts towards high temperatures with increasing magnetic fields. The itinerant electron model (IEO) which is based on the hopping of O 2p itinerant electrons has been used to explain the resistivity behaviour of the samples. It is found that the negative magnetoresistance also increases with a decrease in grain size where the highest %MR of 26% can be observed for the nanocrystalline sample. These results make La0.7Sr0.3MnO3 a suitable candidate for multifunctional applications.

4.
Biochem Mol Biol Educ ; 51(6): 719-728, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-37485773

RESUMO

The polymerase chain reaction (PCR) technique is one of the most potent tools in molecular biology. It is extensively used for various applications ranging from medical diagnostics to forensic science and food quality testing. This technique has facilitated to survive COVID-19 pandemic by identifying the virus-infected individuals effortlessly and effectively. This review explores the principles, recent advancements, challenges, and alternatives of PCR technique in the context of COVID-19 and fungal infections. The introduction of PCR technique for anyone new to this field is the primary aim of this review and thereby equips them to understand the science of COVID-19 and related fungal infections in a simplistic manner.


Assuntos
COVID-19 , Micoses , Humanos , COVID-19/epidemiologia , Pandemias , Reação em Cadeia da Polimerase/métodos , SARS-CoV-2/genética , Teste para COVID-19
5.
J Biophotonics ; 14(8): e202100041, 2021 08.
Artigo em Inglês | MEDLINE | ID: mdl-34042303

RESUMO

The histopathological diagnosis of cancer is the current gold standard to differentiate normal from cancerous tissues. We propose a portable platform prototype to characterize the tissue's thermal and optical properties, and their inter-dependencies to potentially aid the pathologist in making an informed decision. The measurements were performed on 10 samples from five subjects, where the cancerous and adjacent normal were extracted from the same patient. It was observed that thermal conductivity (k) and reduced-scattering-coefficient (µ's ) for both the cancerous and normal tissues reduced with the rise in tissue temperature. Comparing cancerous and adjacent normal tissue, the difference in k and µ's (at 940 nm) were statistically significant (p = 7.94e-3), while combining k and µ's achieved the highest statistical significance (6.74e-4). These preliminary results promise and support testing on a large number of samples for rapidly differentiating cancerous from adjacent normal tissues.


Assuntos
Neoplasias da Mama , Biópsia , Neoplasias da Mama/diagnóstico , Feminino , Humanos
6.
ACS Appl Bio Mater ; 4(1): 451-461, 2021 01 18.
Artigo em Inglês | MEDLINE | ID: mdl-35014296

RESUMO

Cost-effective, fast, and reliable DNA sequencing can be enabled by advances in nanopore-based methods, such as the use of atomically thin graphene membranes. However, strong interaction of DNA bases with graphene leads to undesirable effects such as sticking of DNA strands to the membrane surface. While surface functionalization is one way to counter this problem, here, we present another solution based on a heterostructure nanopore system, consisting of a monolayer of graphene and hexagonal boron nitride (hBN) each. Molecular dynamics studies of DNA translocation through this heterostructure nanopore revealed a surprising and crucial influence of the heterostructure layer order in controlling the base specific signal variability. Specifically, the heterostructure with graphene on top of hBN had nearly 3-10× lower signal variability than the one with hBN on top of graphene. Simulations point to the role of differential underside sticking of DNA bases as a possible reason for the observed influence of the layer order. Our studies can guide the development of experimental systems to study and exploit DNA translocation through two-dimensional heterostructure nanopores for single molecule sequencing and sensing applications.


Assuntos
Compostos de Boro/química , DNA/metabolismo , Grafite/química , Nanoporos , Pareamento de Bases , DNA/química , Poli A/química , Poli A/metabolismo , Poli C/química , Poli C/metabolismo , Poli G/química , Poli G/metabolismo , Poli T/química , Poli T/metabolismo
7.
Biomed Opt Express ; 11(11): 6154-6167, 2020 Nov 01.
Artigo em Inglês | MEDLINE | ID: mdl-33282481

RESUMO

Dengue is one of the most rapidly spreading mosquito-borne viral diseases in the world. Differential diagnosis is a crucial step for the management of the disease and its epidemiology. Point-of-care testing of blood-borne dengue biomarkers provides an advantageous approach in many health care settings, and the ability to follow more than one biomarker at once could significantly improve the management of the disease. Bead-based multiplex technologies (suspension array) can measure multiple biomarker targets simultaneously by using recognition molecules immobilized on microsphere beads. The overarching objective of our work is to develop a portable detection device for the simultaneous measurement of multiple biomarkers important in dengue diagnosis, monitoring and treatment. Here, we present a bead-based assay for the detection of one of the four serotypes of dengue virus non-structural protein (DENV-NS1) as well as its cognate human IgG. In this system, the fluorescent microspheres containing the classification fluorophore and detection fluorophore are imaged through a microfluidic chip using an infinity-corrected microscope system. Calibration curves were plotted for median fluorescence intensity against known concentrations of DENV-NS1 protein and anti-NS1 human IgG. The limit of quantitation was 7.8 ng/mL and 15.6 ng/mL, respectively. The results of this study demonstrate the feasibility of the multiplex detection of dengue biomarkers and present its analytical performance parameters. The proposed imaging device holds potential for point-of-care testing of biomarkers on a highly portable system, and it may facilitate the diagnosis and prevention of dengue as well as other infectious diseases.

8.
Appl Opt ; 59(32): 9971-9977, 2020 Nov 10.
Artigo em Inglês | MEDLINE | ID: mdl-33175769

RESUMO

Transparent samples pose serious challenges in bright-field microscopic imaging due to their low optical contrast, which also affects the imaging speed. While the role of the substrate in enhancing optical contrast has been investigated for imaging modalities such as fluorescence, a similar analysis for bright-field imaging has not been conducted. Here, we explore the effect of the substrate on the optical contrast and imaging speed in bright-field microscopic imaging. We develop a simulation model to explain the significant improvement in these imaging parameters by the introduction of reflective back substrates. We explain the effects using energy density distribution plots, power coupling, and scattering. Further, we explore the notion of optical contrast in the case of microfeatures and a procedure for selecting an appropriate metric to quantify the same. This work concludes with experimental results showing a twofold improvement in contrast and a fivefold improvement in imaging rate by an appropriate choice of back substrate.

9.
Lab Chip ; 20(22): 4296-4309, 2020 11 10.
Artigo em Inglês | MEDLINE | ID: mdl-33094786

RESUMO

The probing of individual cells at specific frequency regimes in a microfluidic impedance flow cytometer led to the observation of unusual "double peak" features in the reactive component of the resulting signal. The phenomenon was restricted to the lower frequencies (400-800 kHz) of the ß-dispersion regime and its occurrence was facilitated by the co-planar microelectrode geometry in the device. To understand the reasons for this anomalous behaviour, the system was modelled using COMSOL. The simulated model agreed well with experimental observations and provided insight into the origins of this signal profile and the effect of various parameters on its behaviour. One of the most significant observations of this study was the high sensitivity of the features in the "double peak" profile to changes in cell membrane capacitance (CMC), compared to conventional "single peaks" of reactive impedance. This was consequently exploited to accurately distinguish populations of normal and glutaraldehyde treated erythrocytes based on variations in their CMC, indicating a drastic decrease in the CMC of treated cells. Additionally, we demonstrate the applicability of using this double peak effect to identify cell populations within a mixture of PBMCs. This study is an improvement over conventional approaches of measuring CMC via impedance flow cytometry by enabling the measurement of both cell size and cell membrane properties at a single frequency rather than using multiple frequencies. Using a single frequency significantly simplifies the system and reduces the associated costs. Additionally, this technique enables the measurement of CMC at relatively low frequencies.


Assuntos
Técnicas Analíticas Microfluídicas , Membrana Celular , Impedância Elétrica , Citometria de Fluxo , Microfluídica
10.
IEEE Trans Biomed Circuits Syst ; 14(4): 879-888, 2020 08.
Artigo em Inglês | MEDLINE | ID: mdl-32746350

RESUMO

Currently, the confirmation of diagnosis of breast cancer is made by microscopic examination of an ultra-thin slice of a needle biopsy specimen. This slice is conventionally formalin-fixed and stained with hematoxylin-eosin and visually examined under a light microscope. This process is labor-intensive and requires highly skilled doctors (pathologists). In this paper, we report a novel tool based on near-infrared spectroscopy (Spectral-IRDx) which is a portable, non-contact, and cost-effective system and could provide a rapid and accurate diagnosis of cancer. The Spectral-IRDx tool performs absorption spectroscopy at near-infrared (NIR) wavelengths of 850, 935, and 1060 nm. We measure normalized detected voltage (Vdn) with the tool in 10 deparaffinized breast biopsy tissue samples, 5 of which were cancer (C) and 5 were normal (N) tissues. The difference in Vdn at 935 nm and 1060 nm between cancer and normal tissues is statistically significant with p-values of 0.0038 and 0.0022 respectively. Absorption contrast factor (N/C) of 1.303, 1.551, and 1.45 are observed for 850, 935, and 1060 nm respectively. The volume fraction contrast (N/C) of lipids and collagens are reported as 1.28 and 1.10 respectively. Higher absorption contrast factor (N/C) and volume fraction contrast (N/C) signifies higher concentration of lipids in normal tissues as compared to cancerous tissues, a basis for delineation. These preliminary results support the envisioned concept for noninvasive and noncarcinogenic NIR-based breast cancer diagnostic platform, which will be tested using a larger number of samples.


Assuntos
Biópsia , Neoplasias da Mama , Espectroscopia de Luz Próxima ao Infravermelho , Biópsia/instrumentação , Biópsia/métodos , Mama/química , Mama/patologia , Neoplasias da Mama/química , Neoplasias da Mama/diagnóstico , Neoplasias da Mama/patologia , Colágeno/química , Desenho de Equipamento , Feminino , Histocitoquímica , Humanos , Lipídeos/química , Espectroscopia de Luz Próxima ao Infravermelho/instrumentação , Espectroscopia de Luz Próxima ao Infravermelho/métodos
11.
Sci Rep ; 10(1): 5080, 2020 Mar 16.
Artigo em Inglês | MEDLINE | ID: mdl-32179770

RESUMO

An amendment to this paper has been published and can be accessed via a link at the top of the paper.

12.
Phys Rev E ; 101(1-1): 012407, 2020 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-32069638

RESUMO

Models based on surfactant-driven instabilities have been employed to describe pattern formation by swarming bacteria. However, by definition, such models cannot account for the effect of bacterial sensing and decision making. Here we present a more complete model for bacterial pattern formation which accounts for these effects by coupling active bacterial motility to the passive fluid dynamics. We experimentally identify behaviors which cannot be captured by previous models based on passive population dispersal and show that a more accurate description is provided by our model. It is seen that the coupling of bacterial motility to the fluid dynamics significantly alters the phase space of surfactant-driven pattern formation. We also show that our formalism is applicable across bacterial species.


Assuntos
Bactérias/efeitos dos fármacos , Tensoativos/farmacologia , Modelos Biológicos , Movimento/efeitos dos fármacos
13.
Sens Actuators B Chem ; 3252020 Dec 15.
Artigo em Inglês | MEDLINE | ID: mdl-34321714

RESUMO

Solid-state nanopores are rapidly emerging as promising platforms for developing various single molecule sensing applications. The modulation of ionic current through the pore due to translocation of the target molecule has been the dominant measurement modality in nanopore sensors. Here, we focus on the dwell time, which is the duration taken by the target molecule or particle to traverse the pore and study its dependence on the strength of interaction of the target with the pore using single gold nanoparticles (NPs) as targets interacting with a silicon nitride (SiN) nanopore. The strength of interaction, which in our case is electrostatic in nature, can be controlled by coating the nanoparticles with charged polymers. We report on an operating regime of this nanopore sensor, characterized by attractive interactions between the nanoparticle and the pore, where the dwell time is exponentially sensitive to the target-pore interaction. We used negatively and positively charged gold nanoparticles to control the strength of their interaction with the Silicon Nitride pore which is negatively charged. Our experiments revealed how this modulation of the electrostatic force greatly affects the dwell time. Positively charged NPs with strong attractive interactions with the pore resulted in increase of dwell times by 2-3 orders of magnitude, from 0.4 ms to 75.3 ms. This extreme sensitivity of the dwell time on the strength of interaction between a target and nanopore can be exploited in emerging nanopore sensor applications.

14.
Sci Rep ; 9(1): 17058, 2019 Nov 19.
Artigo em Inglês | MEDLINE | ID: mdl-31745117

RESUMO

We report on an optimized fabrication protocol for obtaining silver nanoparticles on fused silica substrates via laser photoreduction of a silver salt solution. We find that multiple scans of the laser over the surface leads to a more uniform coverage of densely packed silver nanoparticles of approximately 50 nm diameter on the fused silica surface. Our substrates yield Raman enhancement factors of the order of 1011 of the signal detected from crystal violet. We use a theoretical model based on scanning electron microscope (SEM) images of our substrates to explain our experimental results. We also demonstrate how our technique can be extended to embedding silver nanoparticles in buried microfluidic channels in glass. The in situ laser inscription of silver nanoparticles on a laser machined, sub-surface, microfluidic channel wall within bulk glass paves the way for developing 3D, monolithic, fused silica surface enhance Raman spectroscopy (SERS) microfluidic sensing devices.

15.
J Phys Chem C Nanomater Interfaces ; 123(18): 11908-11916, 2019 May 09.
Artigo em Inglês | MEDLINE | ID: mdl-31316684

RESUMO

Pore functionalization has been explored by several groups as a strategy to control DNA translocation through solid-state nanopores. Here we present a hybrid nanopore system consisting of single-layer graphene and a DNA origami layer to achieve base-selective control of DNA translocation rate through aligned nanopores of the two layers. This is achieved by incorporating unpaired dangling bases called overhangs to the origami near the pore region. Molecular dynamics simulations were used to optimize the design of the origami nanopore and the overhangs. Specifically, we considered the influence of the number and spatial distribution of overhangs on translocation times. The simulations revealed that specific interactions between the overhangs and the translocating single-stranded DNA resulted in base-specific residence times.

16.
Phys Rev E ; 99(5-1): 052410, 2019 May.
Artigo em Inglês | MEDLINE | ID: mdl-31212412

RESUMO

The phenomenon of phase synchronization of oscillatory systems, arising out of feedback coupling is ubiquitous across physics and biology. In noisy, complex systems, one generally observes transient epochs of synchronization followed by nonsynchronous dynamics. How does one guarantee that the observed transient epochs of synchronization are arising from an underlying feedback mechanism and not from some peculiar statistical properties of the system? This question is particularly important for complex biological systems, where the search for a nonexistent feedback mechanism may turn out to be an enormous waste of resources. In this article, we propose a null model for synchronization, motivated by expectations on the dynamical behavior of biological systems, to provide a quantitative measure of the confidence with which one can infer the existence of a feedback mechanism based on observation of transient synchronized behavior. We demonstrate the application of our null model to the phenomenon of gait synchronization in free-swimming nematodes, Caenorhabditis elegans.

17.
iScience ; 13: 305-317, 2019 Mar 29.
Artigo em Inglês | MEDLINE | ID: mdl-30877999

RESUMO

Swarming in Pseudomonas aeruginosa is a coordinated movement of bacteria over semisolid surfaces (0.5%-0.7% agar). On soft agar, P. aeruginosa exhibits a dendritic swarm pattern, with multiple levels of branching. However, the swarm patterns typically vary depending upon the experimental design. In the present study, we show that the pattern characteristics of P. aeruginosa swarm are highly environment dependent. We define several quantifiable, macroscale features of the swarm to study the plasticity of the swarm, observed across different nutrient formulations. Furthermore, through a targeted screen of 113 two-component system (TCS) loci of the P. aeruginosa strain PA14, we show that forty-four TCS genes regulate swarming in PA14 in a contextual fashion. However, only four TCS genes-fleR, fleS, gacS, and PA14_59770-were found essential for swarming. Notably, many swarming-defective TCS mutants were found highly efficient in biofilm formation, indicating opposing roles for many TCS loci.

18.
Nat Commun ; 10(1): 1090, 2019 03 06.
Artigo em Inglês | MEDLINE | ID: mdl-30842414

RESUMO

Research efforts in large area graphene synthesis have been focused on increasing grain size. Here, it is shown that, beyond 1 µm grain size, grain boundary engineering determines the electronic properties of the monolayer. It is established by chemical vapor deposition experiments and first-principle calculations that there is a thermodynamic correlation between the vapor phase chemistry and carbon potential at grain boundaries and triple junctions. As a result, boundary formation can be controlled, and well-formed boundaries can be intentionally made defective, reversibly. In 100 µm long channels this aspect is demonstrated by reversibly changing room temperature electronic mobilities from 1000 to 20,000 cm2 V-1 s-1. Water permeation experiments show that changes are localized to grain boundaries. Electron microscopy is further used to correlate the global vapor phase conditions and the boundary defect types. Such thermodynamic control is essential to enable consistent growth and control of two-dimensional layer properties over large areas.

19.
Phys Rev E ; 100(6-1): 062609, 2019 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-31962428

RESUMO

In a classic paper, Purcell [Proc. Natl. Acad. Sci. U. S. A. 94, 11307 (1997)10.1073/pnas.94.21.11307] analyzed the dynamics of flagellated bacterial swimmers and derived a geometrical relationship which maximizes the propulsion efficiency. Experimental measurements for wild-type bacterial species E. coli have revealed that they closely satisfy this geometric optimality. However, dependence of the flagellar motor speed on the load and more generally the role of the torque-speed characteristics of the flagellar motor are not considered in Purcell's original analysis. Here we derive a tuned condition representing a match between the flagella geometry and the torque-speed characteristics of the flagellar motor to maximize the bacterial swimming speed for a given load. This condition is independent of the geometric optimality condition derived by Purcell. Interestingly, this condition is not satisfied by wild-type E. coli which swims 2-3 times slower than the maximum possible speed given the amount of available motor torque. Finally, we present experimental data on swimming dynamics of a cargo laden bacterial system which follows our analytical model. Our analysis also reveals the existence of an anomalous propulsion regime where the swim speed increases with increasing load (drag).


Assuntos
Escherichia coli/citologia , Escherichia coli/fisiologia , Flagelos/metabolismo , Movimento , Pseudomonas aeruginosa/citologia , Pseudomonas aeruginosa/fisiologia , Torque , Natação
20.
Opt Express ; 26(10): 13461-13473, 2018 May 14.
Artigo em Inglês | MEDLINE | ID: mdl-29801371

RESUMO

We report a method for compensation of errors caused by temperature fluctuations in refractive index measurements using Silicon photonic microring sensors. The method involves determination of resonance wavelength shifts caused by thermal fluctuations using real-time measurement of on-chip temperature variations and thermo-optic coefficient (TOC) of analyte liquids. Resistive metal lines patterned around Silicon microrings are used to track temperature variations and TOC of analyte is calculated by measuring wavelength shifts caused by controlled increments in device temperature. The TOC of de-ionized water is determined to be -1.12 × 10-4/°C, with an accuracy of ±8.26 × 10-6/°C. In our system, chip-surface temperature variations were measured with an instrument limited precision of 0.004 °C yielding a factor of 16 enhancement in tracking accuracy compared to conventional, bottom-of-chip temperature measurement. We show that refractive index detection limit of the microring sensor is also improved by the same factor.

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