Genome Sequence and Assembly of 18 Fusarium Isolates from Florida Citrus under High Huanglongbing Disease Pressure and California Citrus under Low Huanglongbing Disease Pressure.

The genomes of eighteen Fusarium isolates cultured from diseased and healthy citrus trees were sequenced, assembled, and annotated. Isolate species identification was confirmed using single marker (TEF1-alpha) phylogenetic assessment. Studies of the traits and genotypes of plant-associated isolates are important to understanding the fungal contribution to phytobiomes of citrus.

An In Vitro Pipeline for Screening and Selection of Citrus-Associated Microbiota with Potential Anti-"Candidatus Liberibacter asiaticus" Properties.

Huanglongbing (HLB) is a destructive citrus disease that is lethal to all commercial citrus plants, making it the most serious citrus disease and one of the most serious plant diseases. Because of the severity of HLB and the paucity of effective control measures, we structured this study to encompass the entirety of the citrus microbiome and the chemistries associated with that microbial community. We describe the spatial niche diversity of bacteria and fungi associated with citrus roots, stems, and leaves using traditional microbial culturing integrated with culture-independent methods. Using the culturable sector of the citrus microbiome, we created a microbial repository using a high-throughput bulk culturing and microbial identification pipeline. We integrated an in vitro agar diffusion inhibition bioassay into our culturing pipeline that queried the repository for antimicrobial activity against Liberibacter crescens, a culturable surrogate for the nonculturable "Candidatus Liberibacter asiaticus" bacterium associated with HLB. We identified microbes with robust inhibitory activity against L. crescens that include the fungi Cladosporium cladosporioides and Epicoccum nigrum and bacterial species of Pantoea, Bacillus, and Curtobacterium Purified bioactive natural products with anti-"Ca. Liberibacter asiaticus" activity were identified from the fungus C. cladosporioides Bioassay-guided fractionation of an organic extract of C. cladosporioides yielded the natural products cladosporols A, C, and D as the active agents against L. crescens This work serves as a foundation for unraveling the complex chemistries associated with the citrus microbiome to begin to understand the functional roles of members of the microbiome, with the long-term goal of developing anti-"Ca Liberibacter asiaticus" bioinoculants that thrive in the citrus holosystem.IMPORTANCE Globally, citrus is threatened by huanglongbing (HLB), and the lack of effective control measures is a major concern of farmers, markets, and consumers. There is compelling evidence that plant health is a function of the activities of the plant's associated microbiome. Using Liberibacter crescens, a culturable surrogate for the unculturable HLB-associated bacterium "Candidatus Liberibacter asiaticus," we tested the hypothesis that members of the citrus microbiome produce potential anti-"Ca Liberibacter asiaticus" natural products with potential anti-"Ca Liberibacter asiaticus" activity. A subset of isolates obtained from the microbiome inhibited L. crescens growth in an agar diffusion inhibition assay. Further fractionation experiments linked the inhibitory activity of the fungus Cladosporium cladosporioides to the fungus-produced natural products cladosporols A, C, and D, demonstrating dose-dependent antagonism to L. crescens.

Isolamento de Streptococcus agalactiae em diferentes órgãos de tilápias do nilo (Oreochromis niloticus) criadas em tanques-rede / Isolation of Streptococcus agalactiae in different organs of nile tilapia (Oreochromis niloticus) reared in net cages

A estreptococose é uma das principais causas de mortalidade na criação de tilápias no Brasil, causando grandes perdas econômicas. Assim, o estudo objetivou determinar a frequência de isolamento e identificação por PCR de Streptococcus agalactiae em diferentes órgãos de tilápias do Nilo (Oreochromis niloticus) naturalmente infectadas, oriundas de oito pisciculturas da região norte do estado do Paraná que apresentavam sinais clínicos característicos de infecção estreptocócica. Para tanto, coletaram-se amostras de sangue e fragmentos de rim, fígado, baço, coração e encéfalo. Essas foram semeadas em meio ágar infusão de cérebro e coração (BHI) adicionado 5% de sangue de ovino e incubados à 29ºC, durante 7 dias em aerofília. Após o crescimento bacteriano e a partir das características macro e microscópicas, foram selecionadas colônias compatíveis com as do gênero Streptococcus sp.. As espécies foram identificadas através de PCR e confirmadas por meio do sequenciamento do gene 16S rDNA. Os resultados demonstraram que em tilápias do Nilo infectadas com S. agalactiae, o isolamento é mais frequente em encéfalo, rim e fígado em ordem decrescente.

Streptococcosis is one of the major causes of mortality in tilapia's creation in Brazil, inducing great economic losses. As soon, the study objectived to determinate the frequency of isolation and identification the Streptococcus agalactiae in organs different of Oreochromis niloticus naturally infected, derived from eight fish farms in the northern region of the state of Paraná, that presented clinical signs characteristics of streptococcal disease. However, blood samples and fragments (kidney, liver, spleen, heart and brain) were collected. These all samples were plated on solid medium of brain and heart infusion (BHI) added 5% ovine blood and incubated at 29ºC for 7 days in aerophilic conditions. Behind, the bacterial growth and from the macro and microscopic features, colonies compatibles with Streptococcus sp. gender, were selected. The species were identified by PCR reaction and confirmed by sequencing of 16S rDNA gene. The results exhibited that in tilapia of Nile infected with S. agalactiae the isolation is more common in brain, kidney and liver in descending order.

Aspectos fisiológicos e bioquímicos de cultivares de soja submetidos a déficit hídrico induzido por PEG 6000 / Phisiological and biochemical aspects of soybean cultivars submitted to water deficit induced by PEG 6000

Na cultura da soja, o déficit hídrico é um dos fatores limitantes à obtenção da máxima produtividade. A identificação de genótipos com capacidade de tolerância à seca é fundamental para a solução desse problema. Objetivou-se, neste trabalho, analisar a qualidade fisiológica e as respostas bioquímicas de cultivares de soja (MG/BR 46 Conquista, UFUS Carajás, UFUS Impacta, UFUS Riqueza e UFUS Xavante) submetidas ao estresse hídrico com soluções de PEG 6000 em diferentes níveis de potencial osmótico (0; -0,1; -0,2; -0,3 e -0,4 MPa). Avaliou-se a qualidade fisiológica das cultivares por meio dos testes de comprimento de plântulas e biomassa fresca e seca de plântulas. As respostas bioquímicas foram avaliadas pela detecção do ácido indol-acético, pelo conteúdo de sacarose e pelo transporte de água nas plântulas. A cultivar UFUS Riqueza apresentou os melhores desempenhos nos testes de qualidade fisiológica, conteúdo de sacarose, absorção e velocidade de absorção de água em plântulas. A cultivar UFUS Xavante mostrou a maior concentração de AIA e o maior massa de plântulas no teste de transporte de água.

In soybean culture water deficit is one of the most limiting factors to the maximum yield obtained. Genotypes identification with drought tolerance capacity is fundamental to solve this problem. The objective in this paper was analyze the physiological quality and physiological and biochemical responses of soybeans cultivars (MG/BR 46 Conquista, UFUS Carajás, UFUS Impacta, UFUS Riqueza and UFUS Xavante) submitted to water stress with PEG 6000 solutions in different levels of osmotic potentials (0; -0,1; -0,2; -0,3 and -0,4 MPa). Physiological quality of cultivars were evaluated by seedling length test and fresh and dry biomass. The biochemical responses were evaluated by detection of indol-acetic acid (IAA), by saccharose content and seedling water transportation. UFUS Riqueza presented the best performance in physiological quality tests, saccharose content, absorption and water absorption velocity in seedling. UFUS Xavante showed the highest IAA's concentration and the greater weight of seedling in water transportation test.