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1.
Opt Express ; 32(12): 21374-21388, 2024 Jun 03.
Artigo em Inglês | MEDLINE | ID: mdl-38859492

RESUMO

To distinguish the contributions of electromagnetically induced transparency (EIT) and Autler-Townes splitting (ATS) in their applications in precision laser spectroscopy, we propose a real-imaginary spectrum decomposition method to investigate the transparency spectra in a four-level microwave (MW) dressed Rydberg system. We show that the opening transparency windows in the absorption spectra of probe field is a prominent character by EIT, EIT-ATS crossover, and ATS when the MW field is turned off and the intensity of the control field is adjusted. When the MW field is turned on and gradually increased, the EIT is destroyed and disappears. In addition, the most prominent characters that open a transparency window are the EIT-ATS crossover and the ATS. Then, if we further increase the intensity of the MW field, we find that the transparency windows open mainly due to the ATS. Compared to the previous considerations of this issue, which were limited to three-level systems, our four-level scheme reported here is useful for understanding the features of quantum interference in multilevel atomic systems, and has potential applications to study enhanced sensitivity, measurement spectroscopic, quantum processing, quantum communication, and transmission.

2.
Opt Express ; 31(7): 11116-11131, 2023 Mar 27.
Artigo em Inglês | MEDLINE | ID: mdl-37155754

RESUMO

We propose a physical scheme to study the formation of optical soliton molecules (SMs), consisting of two solitons bound together with a π-phase difference, and the scattering of SMs by a localized parity-time (P T)-symmetric potential. In order to stabilize SMs, we apply an additional space-dependent magnetic field to introduce a harmonic trapping potential for the two solitons and balance the repulse interaction induced by the π-phase difference between them. On the other hand, a localized complex optical potential obeying P T symmetry can be created through an incoherent pumping and spatial modulation of the control laser field. We investigate the scattering of optical SMs by the localized P T-symmetric potential, which exhibits evident asymmetric behavior and can be actively controlled by changing the incident velocity of SMs. Moreover, the P T symmetry of the localized potential, together with the interaction between two solitons of the SM, can also have a significant effect on the SM scattering behavior. The results presented here may be useful for understanding the unique properties of SMs and have potential applications in optical information processing and transmission.

3.
Brief Bioinform ; 24(2)2023 03 19.
Artigo em Inglês | MEDLINE | ID: mdl-36917170

RESUMO

Metagenomic sequencing (mNGS) is a powerful diagnostic tool to detect causative pathogens in clinical microbiological testing owing to its unbiasedness and substantially reduced costs. Rapid and accurate classification of metagenomic sequences is a critical procedure for pathogen identification in dry-lab step of mNGS test. However, clinical practices of the testing technology are hampered by the challenge of classifying sequences within a clinically relevant timeframe. Here, we present GPMeta, a novel GPU-accelerated approach to ultrarapid pathogen identification from complex mNGS data, allowing users to bypass this limitation. Using mock microbial community datasets and public real metagenomic sequencing datasets from clinical samples, we show that GPMeta has not only higher accuracy but also significantly higher speed than existing state-of-the-art tools such as Bowtie2, Bwa, Kraken2 and Centrifuge. Furthermore, GPMeta offers GPMetaC clustering algorithm, a statistical model for clustering and rescoring ambiguous alignments to improve the discrimination of highly homologous sequences from microbial genomes with average nucleotide identity >95%. GPMetaC exhibits higher precision and recall rate than others. GPMeta underlines its key role in the development of the mNGS test in infectious diseases that require rapid turnaround times. Further study will discern how to best and easily integrate GPMeta into routine clinical practices. GPMeta is freely accessible to non-commercial users at https://github.com/Bgi-LUSH/GPMeta.


Assuntos
Metagenoma , Microbiota , Sequenciamento de Nucleotídeos em Larga Escala/métodos , Metagenômica/métodos , Sensibilidade e Especificidade
4.
Opt Lett ; 47(4): 917-920, 2022 Feb 15.
Artigo em Inglês | MEDLINE | ID: mdl-35167558

RESUMO

The angle-sensitive photonic bandgap (PBG) is one of the typical features of one-dimensional photonic crystals. Based on the phase-variation compensation effect between the dielectric and hyperbolic metamaterials (HMMs), angle-insensitive PBGs can be realized in photonic hypercrystals. However, since hypercrystals are usually constructed using metal components, these angle-insensitive PBGs are mostly limited to narrow bandwidths in visible range. Here, we replace metal with indium tin oxide (ITO) to construct HMMs in the near-infrared range. In these ITO-based HMMs, we experimentally demonstrate the negative refraction of light in transverse magnetic polarization. With this HMM component, we realize a photonic hypercrystal with an angle-insensitive PBG in the wavelength range of 1.15-2.02 µm. These ITO-based hypercrystals with large angle-insensitive PBGs can find applications in near-infrared reflectors or filters.

5.
Opt Express ; 29(23): 37503-37514, 2021 Nov 08.
Artigo em Inglês | MEDLINE | ID: mdl-34808820

RESUMO

We investigate band evolution of chiral and non-chiral symmetric flatband photonic rhombic lattices by applying a strain along the diagonal direction, and thereby demonstrating Landau-Zener Bloch (LZB) oscillations in the presence of a refractive index gradient. The chiral and non-chiral symmetric rhombic lattices are obtained by adding a detuning to uniform lattices. For the chiral symmetric lattices, the middle flatband is perturbed due to the chiral symmetry breaking while a nearly flatband appears as the bottom band with the increase of strain-induced next-nearest-neighbor hopping. Consequently, LZB oscillations exhibit intriguing characteristics such as asymmetric energy transitions and almost complete suppression of the oscillations. Nevertheless, for the non-chiral symmetric lattices, flatband persists owing to the retained particle-hole symmetry and evolves into the bottom band. Remarkably, the band gap can be readily tuned, which allows controlling of the amplitude of Landau-Zener tunneling (LZT) rate and may lead to thorough LZT. Our analysis provides an alternative perspective on the generation of tunable flatband and may also bring insight to study the symmetry and topological characterization of the flatband.

6.
Opt Express ; 29(12): 17736-17745, 2021 Jun 07.
Artigo em Inglês | MEDLINE | ID: mdl-34154050

RESUMO

Contrary to conventional Tamm plasmon (TP) absorbers of which narrow absorptance peaks will shift toward short wavelengths (blueshift) as the incident angle increases for both transverse magnetic (TM) and transverse electric (TE) polarizations, here we theoretically and experimentally achieve nonreciprocal absorption in a planar photonic heterostructure composed of an isotropic epsilon-near-zero (ENZ) slab and a truncated photonic crystal for TM polarization. This exotic phenomenon results from the interplay between ENZ and material loss. And the boundary condition across the ENZ interface and the confinement effect provided by the TP can enhance the absorption in the ENZ slab greatly. As a result, a strong and nonreciprocal absorptance peak is observed experimentally with a maximum absorptance value of 93% in an angle range of 60∼70°. Moreover, this TP absorber shows strong angle-independence and polarization-dependence. As the characteristics above are not at a cost of extra nanopatterning, this structure is promising to offer a practical design in narrowband thermal emitter, highly sensitive biosensing, and nonreciprocal nonlinear optical devices.

7.
Opt Express ; 29(9): 13576-13589, 2021 Apr 26.
Artigo em Inglês | MEDLINE | ID: mdl-33985090

RESUMO

Realizing a polarization-insensitive broadband optical absorber plays a key role in the implementation of microstructure optoelectrical devices with on-demand functionalities. However, the challenge is that most of these devices involve the constituent metals, thus suffering from poor chemical and thermal stability and a complicated manufacturing process. In addition, the extreme contrast between the negative (metallic) and positive (dielectric) real parts of the constituent permittivities can cause additional problems in the design of structural devices. Based on these facts, this work proposes a design of planar broadband one-dimensional structure based on Fibonacci geometry. Experimental results show that the proposed planar structure exhibits high absorptivity behavior independent of polarization and angle in the wavelength range of 300-1000 nm. The absorptivity remains more than 80% when the incident angle is 60°. This proof-of-concept represents a new strategy for realizing non-metallic broadband optical absorbers with advantages of polarization-independence, low-cost, and wide-field-of-view and paves the way for light manipulation under harsh conditions.

8.
Phys Rev Lett ; 124(18): 183901, 2020 May 08.
Artigo em Inglês | MEDLINE | ID: mdl-32441985

RESUMO

Topological properties of lattices are typically revealed in momentum space using concepts such as the Chern number. Here, we study unconventional loop states, namely, the noncontractible loop states (NLSs) and robust boundary modes, mediated by nontrivial topology in real space. While such states play a key role in understanding fundamental physics of flatband systems, their experimental observation has been hampered because of the challenge in realizing desired boundary conditions. Using a laser-writing technique, we optically establish photonic kagome lattices with both an open boundary by properly truncating the lattice, and a periodic boundary by shaping the lattice into a Corbino geometry. We thereby demonstrate the robust boundary modes winding around the entire edge of the open lattice and, more directly, the NLSs winding in a closed loop akin to that in a torus. We prove that the NLSs due to real-space topology persist in ideal Corbino-shaped kagome lattices of arbitrary size. Our results could be of great importance for our understanding of the singular flatbands and the intriguing physics phenomenon applicable for strongly interacting systems.

9.
Sci Rep ; 9(1): 52, 2019 Jan 10.
Artigo em Inglês | MEDLINE | ID: mdl-30631122

RESUMO

A robust generalized analytical expression for resonance frequencies of plasmonic nanoresonators, which consists of folded rectangular structures, is proposed based on a circuit route. The formulation is rigorously derived from the lumped circuit analogue of the plasmon resonance in a rectangular metallic nanorod. Induced by the nonhomogeneous charge distributions in the plasmonic resonators of rectangular end-caps, the electromagnetic forces drive the harmonic oscillations of free electrons in the plasmonic nanoresonators, generating intrinsically nonlinear shape-dependent LC resonance responses. Even for the plasmonic nanoresonators with much larger structure sizes than the skin depths, the significant frequency deviations due to the phase-retardation behavior can still be adequately described by the generalized expression. Moreover, for a large range of plasmonic nanoresonators with various folded rectangular geometries, sizes and materials, the generalized analytical expression gives the underlining physics and provides accurate predictions, which are perfectly verified by a series of numerical simulations. Our studies not only offer quantitative insights of nearly any plasmonic nanoresonators based on folded rectangular geometries, but also reveal potential applications to design complex plasmonic systems, such as periodic arrays with embedded rectangular nanoresonators.

10.
Nanoscale Res Lett ; 13(1): 328, 2018 Oct 22.
Artigo em Inglês | MEDLINE | ID: mdl-30350224

RESUMO

In this research, we studied enhanced diffuse reflectance that can be achieved by excitations of multiple-scattering in a hybrid micro-structured titanium dioxide coating. Conventional approaches to obtain diffuse reflection structure rely heavily on exciting the scattering of randomly textured surface, whereas here, we reveal numerically and experimentally that, besides interface scattering, bulk scattering of ordered-disordered hybrid structure can be also employed to obtain highly efficient diffuse reflector. The diffuse reflectance over the measured wavelength region increases significantly with thickness, while angle and polarization-dependent specular reflections are suppressed. These results show the potential to be used as a highly efficient diffuse reflector or for applications in various advanced fields of photonics related to light extractions and diffusers.

11.
Phys Rev Lett ; 121(26): 263902, 2018 Dec 28.
Artigo em Inglês | MEDLINE | ID: mdl-30636121

RESUMO

Flatband systems typically host "compact localized states" (CLS) due to destructive interference and macroscopic degeneracy of Bloch wave functions associated with a dispersionless energy band. Using a photonic Lieb lattice (LL), such conventional localized flatband states are found to be inherently incomplete, with the missing modes manifested as extended line states that form noncontractible loops winding around the entire lattice. Experimentally, we develop a continuous-wave laser writing technique to establish a finite-sized photonic LL with specially tailored boundaries and, thereby, directly observe the unusually extended flatband line states. Such unconventional line states cannot be expressed as a linear combination of the previously observed boundary-independent bulk CLS but rather arise from the nontrivial real-space topology. The robustness of the line states to imperfect excitation conditions is discussed, and their potential applications are illustrated.

12.
Opt Lett ; 41(7): 1435-8, 2016 Apr 01.
Artigo em Inglês | MEDLINE | ID: mdl-27192255

RESUMO

We present a simple, yet effective, approach for optical induction of Lieb photonic lattices, which typically rely on the femtosecond laser writing technique. Such lattices are established by judiciously overlapping two sublattices (an "egg-crate" lattice and a square lattice) with different periodicities through a self-defocusing photorefractive medium. Furthermore, taking advantage of the superposition of localized flat-band states inherent in the Lieb lattices, we demonstrate distortion-free image transmission in such two-dimensional perovskite-like photonic structures. Our experimental observations find good agreement with numerical simulations.

13.
Opt Express ; 24(8): 8877-85, 2016 Apr 18.
Artigo em Inglês | MEDLINE | ID: mdl-27137320

RESUMO

We report the first experimental demonstration of localized flat-band states in optically induced Kagome photonic lattices. Such lattices exhibit a unique band structure with the lowest band being completely flat (diffractionless) in the tight-binding approximation. By taking the advantage of linear superposition of the flat-band eigenmodes of the Kagome lattices, we demonstrate a high-fidelity transmission of complex patterns in such two-dimensional pyrochlore-like photonic structures. Our numerical simulations find good agreement with experimental observations, upholding the belief that flat-band lattices can support distortion-free image transmission.

14.
Opt Express ; 23(4): 4397-405, 2015 Feb 23.
Artigo em Inglês | MEDLINE | ID: mdl-25836476

RESUMO

We demonstrate self-trapping and rotation of higher-band dipole and quadruple-like gap solitons by single-site excitation in a two-dimensional square photonic lattice under self-focusing nonlinearity. Experimental results show that the second-band dipole gap solitons reside in the first photonic (Bragg reflection) gap, whereas the quadruple-like gap solitons are formed in an even higher photonic gap, resulting from modes of the third-band. Moreover, both dipole and quadruple-like gap solitons exhibit dynamical rotation around the lattice principle axes and the direction of rotation is changing periodically during propagation, provided that they are excited under appropriate initial conditions. In the latter case, the nonlinear rotation is accompanied by periodic transitions between quadruple and doubly-charged vortex states. Our numerical simulations find good agreement with the experimental observations.

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