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1.
Chembiochem ; 25(4): e202300798, 2024 02 16.
Artigo em Inglês | MEDLINE | ID: mdl-38169080

RESUMO

Site-specific modification of proteins with synthetic fluorescent tag effectively improves the resolution of imaging, and such a labeling method with negligible three-dimensional structural perturbations and minimal impact on the biological functions of proteins is of high interest to dissect the high-resolution activities of biomolecules in complex systems. To this end, several non-emissive iridium(III) complexes [Ir(C-N)2 (H2 O)2 ]+ OTF- (C-N denotes various cyclometalated ligands) were designed and synthesized. These complexes were tested for attaching a protein by coordinating to H/X (HisMet, HisHis, and HisCys) that are separated by i and i+4 in α-helix. Replacement of the two labile water ligands in the iridium(III) complex by a protein HisHis pair increases the luminescent intensity up to over 100 folds. This labeling approach has been demonstrated in a highly specific and efficient manner in a number of proteins, and it is also feasible for labeling target proteins in cell lysates.


Assuntos
Irídio , Luminescência , Irídio/química
2.
Chembiochem ; 20(21): 2738-2742, 2019 11 04.
Artigo em Inglês | MEDLINE | ID: mdl-31136055

RESUMO

Unstable and low-abundance protein complexes represent a large family of transient protein complexes that are difficult to characterize, even by means of high-resolution NMR spectroscopy. A method to assign the NMR signals of these unstable complexes through a combination of selective isotope labeling of amino acids in a protein and site-specific labeling the protein with a paramagnetic tag is presented herein. By using this method, the resonances of unstable thioester intermediate complex (lifetime <5 h and highest concentration ≈20 µm) generated by Staphylococcus aureus sortase A and its peptide substrate under a real-time reaction have been assigned.


Assuntos
Aminoácidos/química , Marcação por Isótopo/métodos , Complexos Multienzimáticos/química , Ressonância Magnética Nuclear Biomolecular/métodos , Conformação Proteica , Aminoácidos/metabolismo , Aminoaciltransferases/química , Aminoaciltransferases/genética , Aminoaciltransferases/metabolismo , Proteínas de Bactérias/química , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Cisteína Endopeptidases/química , Cisteína Endopeptidases/genética , Cisteína Endopeptidases/metabolismo , Estabilidade Enzimática , Modelos Moleculares , Complexos Multienzimáticos/metabolismo , Isótopos de Nitrogênio/química , Isótopos de Nitrogênio/metabolismo , Ligação Proteica , Staphylococcus aureus/enzimologia , Staphylococcus aureus/genética , Especificidade por Substrato
3.
J Fluoresc ; 25(4): 1023-9, 2015 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-26018752

RESUMO

A novel coumarin-based fluorescent probe CF was synthesized for the detection of hydrazine both in aqueous solution and vapor state with high sensitivity and selectivity. Upon addition of hydrazine, the solution of probe CF in MeCN-H2O (3/7, v/v, buffered CH3COOH/CH3COONa) at pH 5.0 exhibited a remarkable change in emission color from pale green to light blue, which could be recognized with naked eyes. Applied in weak acid condition, probe CF could detect hydrazine selectively with large amount of unknown environments according to the competing tests. Besides, with the limit of detection 8.32 ppb (2.6 × 10(-7) M), probe CF could well meet the request (10 ppb) of the U.S. Environmental Protection Agency (EPA).

4.
Spectrochim Acta A Mol Biomol Spectrosc ; 148: 348-54, 2015 Sep 05.
Artigo em Inglês | MEDLINE | ID: mdl-25911159

RESUMO

We have developed a novel fluorescent chemosensor (DAM) based on dansyl and morpholine units for the detection of mercury ion with excellent selectivity and sensitivity. In the presence of Hg(2+) in a mixture solution of HEPES buffer (pH 7.5, 20 mM) and MeCN (2/8, v/v) at room temperature, the fluorescence of DAM was almost completely quenched from green to colorless with fast response time. Moreover, DAM also showed its excellent anti-interference capability even in the presence of large amount of interfering ions. It is worth noting that DAM could be used to detect Hg(2+) specifically in the Yellow River samples, which significantly implied the potential applications of DAM in the complicated environment samples.


Assuntos
Compostos de Dansil/química , Corantes Fluorescentes/química , Mercúrio/análise , Morfolinas/química , Espectrometria de Fluorescência/métodos , Poluentes Químicos da Água/análise , Monitoramento Ambiental/métodos , Limite de Detecção , Modelos Moleculares , Rios/química
5.
J Mater Chem B ; 2(42): 7344-7350, 2014 Nov 14.
Artigo em Inglês | MEDLINE | ID: mdl-32261958

RESUMO

We developed a new dansyl phthalimide-based fluorescent chemosensor for hydrazine detection. Upon a Gabriel type-based hydrazinolysis of dansyl phthalimide (DPI) in the presence of hydrazine in a mixture of HEPES buffer (pH 7.0, 20 mM) and DMSO (1/9, v/v) at room temperature, the chemosensor produces fluorescent dansyl-NH2 with the maximum emission wavelength changed from 475 nm to 512 nm along with a color change from yellow to colorless, allowing colorimetric detection of hydrazine by the naked eye. DPI can selectively detect hydrazine over other environmentally abundant ions. Moreover, DPI coated with silica gel TLC plates could act as a visual and fluorimetric probe for hydrazine vapor at a partial pressure of 5.5 × 10-3 mm Hg over other potentially interfering volatile analytes, including hydrogen peroxide, ethylenediamine, urea, ammonium hydroxide and methylamine. DPI can also be used for the detection of hydrazine in water samples and HeLa cells without appreciable interference from other biologically abundant analytes. The limit of detection is 6.01 ppb (1.88 × 10-7 M), which is well below the accepted limit (10 ppb) for hydrazine set by the U.S. Environmental Protection Agency (EPA).

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