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1.
Biofabrication ; 16(2)2024 Mar 28.
Artigo em Inglês | MEDLINE | ID: mdl-38507789

RESUMO

Corneal damage contributes to blindness in millions of people. Simulating natural corneas with artificial corneas is challenging due to material and manufacturing limitations, including poor mechanical properties, complex manufacturing processes, and ocular histocompatibility. In this study, electrospun micro-nanofibrous decellularized extracellular matrix (dECM) is combined with digital light processing 3D bioprinting and validated as a bioartificial cornea for the first time. Electrospinning gives the material a controllable shape, and the electrospun micro-nanofibrous dECM, with preserved inherent biochemical components, can better mimic the natural ECM native microenvironment. An efficient platform can be developed for creating novel structural materials, when combined with intelligent manufacturing. Artificial biological corneas developed using this method showed five-fold improvements in mechanical properties (248.5 ± 35.67 kPa vs. 56.91 ± 3.68 kPa,p< 0.001), superior guidance for cell organization and adhesion, and better maintenance of the cellular phenotype of keratocytes. In animal studies,in vivotransplantation of this artificial cornea showed better regeneration, which accelerated corneal epithelialization and maintained corneal transparency. This method has potential for biomedical applications, and bioartificial corneas manufactured by this method have ideal properties as an alternative to lamellar keratoplasty, with promise for clinical transformation.


Assuntos
Bioimpressão , Nanofibras , Animais , Humanos , Matriz Extracelular Descelularizada , Bioimpressão/métodos , Córnea , Matriz Extracelular/química , Alicerces Teciduais/química , Engenharia Tecidual/métodos
2.
Langmuir ; 40(10): 5369-5377, 2024 Mar 12.
Artigo em Inglês | MEDLINE | ID: mdl-38417158

RESUMO

Large-scale underground hydrogen storage (UHS) plays a vital role in energy transition. H2-brine interfacial tension (IFT) is a crucial parameter in structural trapping in underground geological locations and gas-water two-phase flow in subsurface porous media. On the other hand, cushion gas, such as CO2, is often co-injected with H2 to retain reservoir pressure. Therefore, it is imperative to accurately predict the (H2 + CO2)-water/brine IFT under UHS conditions. While there have been a number of experimental measurements on H2-water/brine and (H2 + CO2)-water/brine IFT, an accurate and efficient (H2 + CO2)-water/brine IFT model under UHS conditions is still lacking. In this work, we use molecular dynamics (MD) simulations to generate an extensive (H2 + CO2)-water/brine IFT databank (840 data points) over a wide range of temperature (from 298 to 373 K), pressure (from 50 to 400 bar), gas composition, and brine salinity (up to 3.15 mol/kg) for typical UHS conditions, which is used to develop an accurate and efficient machine learning (ML)-based IFT equation. Our ML-based IFT equation is validated by comparing to available experimental data and other IFT equations for various systems (H2-brine/water, CO2-brine/water, and (H2 + CO2)-brine/water), rendering generally good performance (with R2 = 0.902 against 601 experimental data points). The developed ML-based IFT equation can be readily applied and implemented in reservoir simulations and other UHS applications.

3.
Life Sci ; 336: 122254, 2024 Jan 01.
Artigo em Inglês | MEDLINE | ID: mdl-37977355

RESUMO

AIMS: Gliomas are the most common central nervous system malignancies, with limited therapeutic options and poor prognosis, which are primarily attributed to the "immune desert" microenvironment. Previously, we constructed a three-gene-deleted oncolytic adenovirus (Ad-TD) loaded with non-secreting interleukin-12 (nsIL-12), which could be amplified in tumor cells and induce immunity to suppress tumors. However, the effects of this oncolytic virus on gliomas and their immune microenvironment remain unclear. There is an urgent need for further research. MATERIALS AND METHODS: We constructed a Syrian hamster brain tumor model and demonstrated the efficacy and mechanism of the novel oncolytic virus in treating brain tumors through a series of in vitro and in vivo experiments. We investigated the efficacy and safety (the number of hamsters in each group is either 5 or 10) of the oncolytic virus treatment in Syrian hamsters using a virus-treated group, a control virus-treated group, and a blank control group. KEY FINDINGS: In vitro assays showed that Ad-TD-nsIL-12 could specifically proliferate in brain tumor cells which induce tumor cell apoptosis and intracellular expression of interleukin (IL)-12. Moreover, in vivo experiments demonstrated that Ad-TD-nsIL-12 could effectively inhibit the progression of brain tumors and prolong survival. Ad-TD-nsIL-12 significantly enhanced T-cell infiltration in the brain tumor microenvironment. SIGNIFICANCE: Ad-TD-nsIL-12 can inhibit glioma progression and increase T-cell infiltration in the tumor tissue, particularly infiltration by cytotoxic T cells (CD8+). Ad-TD-nsIL-12 can amplify and produce IL-12, inducing anti-glioma immune responses to inhibit tumor progression.


Assuntos
Neoplasias Encefálicas , Glioma , Terapia Viral Oncolítica , Vírus Oncolíticos , Cricetinae , Animais , Humanos , Vírus Oncolíticos/genética , Interleucina-12/genética , Microambiente Tumoral , Linhagem Celular Tumoral , Ensaios Antitumorais Modelo de Xenoenxerto , Glioma/terapia , Neoplasias Encefálicas/terapia , Mesocricetus
4.
Chemosphere ; 350: 140928, 2024 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-38092174

RESUMO

CO2-responsive microemulsion (ME) is considered a promising candidate for deep-cleaning and oil recovery from oil-contaminated soils. Understanding the responsive nature of different microstructures (i.e., oil-in-water (O/W), bicontinuous (B.C.) and water-in-oil (W/O)) is essential for unlocking the potential and mechanisms of CO2-responsive emulsions in complex multiphase systems and providing comprehensive guidance for remediation of oil-contaminated soils. Herein, the responsiveness of microstructures of ME to CO2 trigger was investigated using experimental designs and coarse-grained molecular dynamic simulations. MEs were formed for the first time by a weakly associated pseudo-Gemini surfactant of indigenous organic acids (naphthenic acids, NAs are a class of natural surface-active molecules in crude oil) and tetraethylenepentamine (TEPA) through fine tuning of co-solvent of dodecyl benzene sulfonic acid (DBSA) and butanol. The O/W ME exhibited an optimal CO2-responsive character due to easier proton migration in the continuous aqueous phase and more pronounced dependence of configuration on deprotonated NA ions. Conversely, the ME with W/O microstructure exhibited a weak to none responsive characteristic, most likely attributed to its high viscosity and strong oil-NA interactions. The O/W ME also showed superior cleaning efficiency and oil recovery from oil-contaminated soils. The results from this study provide insights for the design of CO2-responsive MEs with desired performance and guidance for choosing the favorable operating conditions in various industrial applications, such as oily solid waste treatment, enhanced oil recovery (EOR), and pipeline transportation. The insights from this work allow more efficient and tailored design of switchable MEs for manufacturing advanced responsive materials in various industrial sectors and formulation of household products.


Assuntos
Dióxido de Carbono , Óleos , Óleos/química , Tensoativos/química , Emulsões/química , Água/química , Solo
5.
Cancers (Basel) ; 15(22)2023 Nov 20.
Artigo em Inglês | MEDLINE | ID: mdl-38001743

RESUMO

BACKGROUND: Based on the literature and data on its clinical trials, the incidence of venous thromboembolism (VTE) in patients undergoing neurosurgery has been 3.0%~26%. We used advanced machine learning techniques and statistical methods to provide a clinical prediction model for VTE after neurosurgery. METHODS: All patients (n = 5867) who underwent neurosurgery from the development and retrospective internal validation cohorts were obtained from May 2017 to April 2022 at the Department of Neurosurgery at the Sanbo Brain Hospital. The clinical and biomarker variables were divided into pre-, intra-, and postoperative. A univariate logistic regression (LR) was applied to explore the 67 candidate predictors with VTE. We used a multivariable logistic regression (MLR) to select all significant MLR variables of MLR to build the clinical risk prediction model. We used a random forest to calculate the importance of significant variables of MLR. In addition, we conducted prospective internal (n = 490) and external validation (n = 2301) for the model. RESULTS: Eight variables were selected for inclusion in the final clinical prediction model: D-dimer before surgery, activated partial thromboplastin time before neurosurgery, age, craniopharyngioma, duration of operation, disturbance of consciousness on the second day after surgery and high dose of mannitol, and highest D-dimer within 72 h after surgery. The area under the curve (AUC) values for the development, retrospective internal validation, and prospective internal validation cohorts were 0.78, 0.77, and 0.79, respectively. The external validation set had the highest AUC value of 0.85. CONCLUSIONS: This validated clinical prediction model, including eight clinical factors and biomarkers, predicted the risk of VTE following neurosurgery. Looking forward to further research exploring the standardization of clinical decision-making for primary VTE prevention based on this model.

6.
Langmuir ; 39(37): 13019-13027, 2023 Sep 19.
Artigo em Inglês | MEDLINE | ID: mdl-37669184

RESUMO

In this work, we conduct molecular dynamics simulations to investigate pressure-driven brine flow in silica mesopores under typical reservoir conditions (323 K and 20 MPa). While surface counterions accumulate strongly in the vicinity of fully deprotonated silica surfaces, water forms multilayer structures due to hydrogen bonding, counterion hydration, and excluded-volume effect. Brine flow behaviors exhibit adsorption, transition, and bulk-like regions in fully deprotonated silica mesopores, while the transition region is negligible in fully protonated ones. In the adsorption region, strong surface hydrogen bonding and a high degree of counterion hydration collectively hinder water mobility. Even without surface hydrogen bonding, persistent ion hydration impedes water flow, leading to the transition region in fully deprotonated silica mesopores and higher viscosity of brine (with 10 wt % NaCl) in the bulk region. This work elucidates the collective effects of surface chemistry and interfacial water structures on brine flow behaviors in silica mesopores from molecular perspectives.

7.
PeerJ ; 11: e15810, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-37547724

RESUMO

Background: Gliomas are the most commonly-detected malignant tumors of the brain. They contain abundant long non-coding RNAs (lncRNAs), which are valuable cancer biomarkers. LncRNAs may be involved in genomic instability; however, their specific role and mechanism in gliomas remains unclear. LncRNAs that are related to genomic instability have not been reported in gliomas. Methods: The transcriptome data from The Cancer Genome Atlas (TCGA) database were analyzed. The co-expression network of genomic instability-related lncRNAs and mRNA was established, and the model of genomic instability-related lncRNA was identified by univariate Cox regression and LASSO analyses. Based on the median risk score obtained in the training set, we divided the samples into high-risk and low-risk groups and proved the survival prediction ability of genomic instability-related lncRNA signatures. The results were verified in the external data set. Finally, a real-time quantitative polymerase chain reaction assay was performed to validate the signature. Results: The signatures of 17 lncRNAs (LINC01579, AL022344.1, AC025171.5, LINC01116, MIR155HG, AC131097.3, LINC00906, CYTOR, AC015540.1, SLC25A21.AS1, H19, AL133415.1, SNHG18, FOXD3.AS1, LINC02593, AL354919.2 and CRNDE) related to genomic instability were identified. In the internal data set and Gene Expression Omnibus (GEO) external data set, the low-risk group showed better survival than the high-risk group (P < 0.001). In addition, this feature was identified as an independent risk factor, showing its independent prognostic value with different clinical stratifications. The majority of patients in the low-risk group had isocitrate dehydrogenase 1 (IDH1) mutations. The expression levels of these lncRNAs were significantly higher in glioblastoma cell lines than in normal cells. Conclusions: Our study shows that the signature of 17 lncRNAs related to genomic instability has prognostic value for gliomas and could provide a potential therapeutic method for glioblastoma.


Assuntos
Glioblastoma , Glioma , RNA Longo não Codificante , Humanos , RNA Longo não Codificante/genética , Prognóstico , Instabilidade Genômica/genética , Mutação , Glioma/genética
8.
Int J Bioprint ; 9(5): 774, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-37555081

RESUMO

Millions of individuals across the world suffer from corneal stromal diseases that impair vision. Fortunately, three-dimensional (3D) bioprinting technology which has revolutionized the field of regenerative tissue engineering makes it feasible to create personalized corneas. In this study, an artificial cornea with a high degree of precision, smoothness, and programmable curvature was prepared by using digital light processing (DLP) 3D bioprinting in one piece with no support structure, and the construct was then confirmed by optical coherence tomography (OCT). On the basis of this approach, we developed a novel corneal decellularized extracellular matrix/gelatin methacryloyl (CECM-GelMA) bioink that can produce complex microenvironments with highly tunable mechanical properties while retaining high optical transmittance. Furthermore, the composite hydrogel was loaded with human corneal fibroblasts (hCFs), and in vitro experiments showed that the hydrogel maintained high cell viability and expressed core proteins. In vivo tests revealed that the hydrogel might promote epithelial regeneration, keep the matrix aligned, and restore clarity. This demonstrates how crucial a role CECM plays in establishing a favorable environment that encourages the transformation of cell function. Therefore, artificial corneas that can be rapidly customized have a huge potential in the development of in vitro corneal matrix analogs.

9.
Langmuir ; 39(34): 12226-12234, 2023 Aug 29.
Artigo em Inglês | MEDLINE | ID: mdl-37581528

RESUMO

Due to the fracturing fluid imbibition and primary water, oil-water two-phase fluids generally exist in shale nanoporous media. The effects of water phase on shale oil recovery and geological carbon sequestration via CO2 huff-n-puff is non-negligible. Meanwhile, oil-CO2 miscibility after CO2 huff-n-puff also has an important effect on oil-water two-phase flow behaviors. In this work, by considering the oil-CO2 competitive adsorption behaviors and the effects of oil-CO2 miscibility on water wettability, an improved multicomponent and multiphase lattice Boltzmann method is proposed to study the effects of water phase on CO2 huff-n-puff. Additionally, the effects of oil-CO2 miscibility on oil-water flow behaviors and relative permeability are also discussed. The results show that due to Jamin's effect of water droplets in oil-wetting pores and the capillary resistance of bridge-like water phase in water-wetting pores, CO2 can hardly diffuse into the oil phase, causing a large amount of remaining oil. As water saturation increases, Jamin's effect and the capillary resistance become more pronounced, and the CO2 storage mass gradually decreases. Then, based on the results from molecular dynamics simulations, the influences of oil-CO2 miscibility on oil-water relative permeability in calcite nanoporous media are studied, and as the oil mass percentage in the oil-CO2 miscible system decreases, the oil/water relative permeability decreases/increases. The improved lattice Boltzmann model can be readily extended to quantitatively calculate geological CO2 storage mass considering water saturation and calculate the accurate oil-water relative permeability based on the real 3D digital core.

10.
ACS Nano ; 17(16): 15516-15528, 2023 08 22.
Artigo em Inglês | MEDLINE | ID: mdl-37548636

RESUMO

A high-efficiency drug screening method is urgently needed due to the expanding number of potential targets and the extremely long time required to assess them. To date, high throughput and high content have not been successfully combined in image-based drug screening, which is the main obstacle to improve the efficiency. Here, we establish a high-throughput and high-content drug screening method by preparing a superhydrophobic microwell array plate (SMAP) and combining it with protein-retention expansion microscopy (proExM). Primarily, we described a flexible method to prepare the SMAP based on photolithography. Cells were cultured in the SMAP and treated with different drugs using a microcolumn-microwell sandwiching technology. After drug treatment, proExM was applied to realize super-resolution imaging. As a demonstration, a 7 × 7 image array of microtubules was successfully collected within 3 h with 68 nm resolution using this method. Qualitative and quantitative analyses of microtubule and mitochondria morphological changes after drug treatment suggested that more details were revealed after applying proExM, demonstrating the successful combination of high throughput and high content.


Assuntos
Microscopia , Microtúbulos , Avaliação Pré-Clínica de Medicamentos , Ensaios de Triagem em Larga Escala/métodos
11.
Artigo em Inglês | MEDLINE | ID: mdl-37121946

RESUMO

Neonicotinoids (NEOs) pesticides are widely used around the world, especially in the tropics with greater frequency and intensity. However, little is known about NEOs residue in drinking water of tropics. In this study, a highly efficient method using ultra-performance liquid chromatography-tandem mass spectrometry (UPLC-MS/MS) was established for determining eight NEOs in source water and tap water of Hainan Island, China. The method adopted a high-throughput direct aqueous injection without sample concentration steps, with a rapid analyzing period of 5.0 min, method detection limits (MDLs) in the range of 0.84-1.82 ng/L and the average recoveries ranged from 83% to 116%. NEOs were detected in all source water samples and at an upper level as compared with other parts of China. The most frequently detected NEO was imidacloprid with a detection frequency of 94%, followed by clothianidin (88%) and thiamethoxam (78%), with maximum concentrations of 86.4, 164, and 188 ng/L, respectively. Moreover, seasonal and spatial variations had remarkable impacts on NEO contamination in source water. Drinking water treatment processes removed approximately 20% of NEOs from surface water. However, 90% of tap water samples contained at least one NEO, With 3 samples' concentration of single NEO exceeding the acceptable value recommended by the European Union (100 ng/L). Therefore, the risk of human exposure through drinking water was evaluated for 4 age group and 2 genders. Young children aged 9 months to 3 years old were found to have the highest risk, with the median exposure up to 4 times greater than teenagers and adults. Next, water intake is likely only a small part of the daily intake of these individuals, thus the potential health problems caused by NEOs present in the tap water of Hainan should not be ignored.

12.
J Craniofac Surg ; 34(2): 467-470, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-36857564

RESUMO

OBJECTIVE: To investigate the surgical implications and morphologic type of upward bulging of the planum sphenoidale (PS) in anterior skull base meningiomas involving the tuberculum sellae area. METHODS: Between January 2014 and June 2021, 96 patients with anterior skull base meningiomas underwent surgery at the Sanbo Brain Hospital of Capital Medical University. A total of 96 patients with nonintracranial space-occupying lesions were selected as the control group. The height of upward bulging of the PS was measured and classified. The authors performed univariate and multivariate analyses to evaluate the rate and effects of upward bulging of the PS. RESULTS: The PS upward bulging rate was 23.00% versus 66.70% (P<0.001) between the control and meningioma groups. Multiple linear regression showed that it was correlated with the tumor midsagittal anteroposterior length (P=0.025) and the midsagittal height diameter (P=0.012). According to the height of PS upward bulging, it was divided into types 1, 2, and 3. The tumor gross-total resection rates were 96.9%, 92.3%, and 76.0%, respectively (P=0.042). CONCLUSIONS: Anterior skull base meningiomas involving the tuberculum sellae area can cause PS upward bulging, which lowers the tumor resection rate and should be considered while determining the treatment approach.


Assuntos
Neoplasias Meníngeas , Meningioma , Humanos , Encéfalo , Hospitais , Base do Crânio
13.
Materials (Basel) ; 16(3)2023 Jan 25.
Artigo em Inglês | MEDLINE | ID: mdl-36770071

RESUMO

Al-Si-Cu-Mg cast aluminum alloys have important applications in automobile lightweight due to their advantages such as high strength-to-weight ratio, good heat resistance and excellent casting performance. With the increasing demand for strength and toughness of automotive parts, the development of high strength and toughness Al-Si-Cu-Mg cast aluminum alloys is one of the effective measures to promote the application of cast aluminum alloys in the automotive industry. In this paper, the research progress of improving the strength and toughness of Al-Si-Cu-Mg cast aluminum alloys was described from the aspects of multi-component alloying and heat treatment based on the strengthening mechanism of Al-Si-Cu-Mg cast aluminum alloys. Finally, the development prospects of automotive lightweight Al-Si-Cu-Mg cast aluminum alloys is presented.

14.
Biomed Pharmacother ; 157: 114037, 2023 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-36427388

RESUMO

Glioblastoma (GBM) is one of the most aggressive primary malignant brain tumors. The major challenge is the lack of effective therapeutic drugs due to the blood-brain barrier (BBB) and tumor heterogeneity. Remdesivir (RDV), a new member of the nucleotide analog family, has previously been shown to have excellent antiviral effects and BBB penetration, and was predicted here to have anti-GBM effects. In vitro experiments, RDV significantly inhibited the growth of GBM cells, with IC50 values markedly lower than those of normal cell lines or the same cell lines treated with temozolomide. Moreover, in multiple mouse models, RDV not only distinctly inhibited the progression and improved the prognosis of GBM but also exhibited a promising biosafety profile, as manifested by the lack of significant body weight loss, liver or kidney dysfunction or organ structural damage after administration. Furthermore, we investigated the anti-GBM mechanism by RNA-seq and identified that RDV might induce apoptosis of GBM cells by enhancing endoplasmic reticulum (ER) stress and activating the PERK-mediated unfolded protein response. In conclusion, our results indicated that RDV might serve as a novel agent for GBM treatment by increasing ER stress and inducing apoptosis in GBM cells.


Assuntos
Neoplasias Encefálicas , Glioblastoma , Camundongos , Animais , Neoplasias Encefálicas/patologia , Glioblastoma/patologia , Estresse do Retículo Endoplasmático , Temozolomida , Resposta a Proteínas não Dobradas , Apoptose , Linhagem Celular Tumoral
15.
Carbohydr Polym ; 297: 119993, 2022 Dec 01.
Artigo em Inglês | MEDLINE | ID: mdl-36184162

RESUMO

The aggregation behavior of carboxymethyl chitosan (CMCS) plays an important role in its extensive applications. Here, we perform molecular dynamics simulations to investigate aggregation behaviors of CMCS in water and the effects of degrees of deacetylation (DD) and substitution (DS) and ionization states (equivalently different pH conditions). CMCS prefers to aggregate in neutral condition, self-assembling into multimeric forms with interlaced stacking of molecular chains, while forming dimer or trimer through twisted stacking and parallel stacking in acidic and alkaline conditions, respectively. With the increase of DD and DS, the aggregation becomes weaker when in neutral and alkaline conditions, while gets stronger in acidic environment. The presence of intramolecular hydrogen bonds and exo-anomeric effect causes twisted, coplanar and extended conformations of individual chain in acidic, alkaline and neutral conditions, respectively, contributing to their distinct inter-chain stacking structures. Subsequently, the specific intermolecular hydrogen bonding, hydrophobic and electrostatic interactions stabilize the aggregation structures.


Assuntos
Quitosana , Quitosana/química , Ligação de Hidrogênio , Simulação de Dinâmica Molecular , Estrutura Molecular , Água/química
16.
J Colloid Interface Sci ; 627: 661-670, 2022 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-35872422

RESUMO

HYPOTHESIS: Pseudo-Gemini surfactants (PGS) possessing switchable and recyclable features have drawn increasing attention on generating high-performance CO2-responsive emulsions for wide range and versatile applications. However, there is a lack of fundamental understanding on how the molecular structure of PGS affects the stability and switchability of emulsions. We hypothesize that the length and type of the spacer in PGS play a decisive role in controlling interfacial and switching properties. EXPERIMENTS: Two series of PGS with different spacers were prepared through electrostatic association between amines and oleic acid. The interfacial activity and CO2-responsive properties of corresponding emulsions were systematically investigated by well-designed experiments and molecular dynamics simulations. FINDINGS: Increasing the spacer length to allow the bent configuration leads to more tight arrangement of oleic molecules, consequently improving the interfacial activity. In addition, the introduction of amino group into the spacer dramatically promotes CO2 response of resulting PGS due to ehanced migration of the spacer from the interface to the aqueous phase after CO2 addition. These results are inspiring in designing controllable CO2-responsive emulsions for a wide range of industrial applications (e.g., enhanced oil recovery and oil-contaminated soil remediation).


Assuntos
Dióxido de Carbono , Ácido Oleico , Aminas , Dióxido de Carbono/química , Emulsões/química , Estrutura Molecular , Solo , Tensoativos/química , Água/química
17.
Database (Oxford) ; 20222022 07 02.
Artigo em Inglês | MEDLINE | ID: mdl-35779245

RESUMO

Bipolar disorder (BIP) is one of the most common hereditary psychiatric disorders worldwide. Elucidating the genetic basis of BIP will play a pivotal role in mechanistic delineation. Genome-wide association studies (GWAS) have successfully reported multiple susceptibility loci conferring BIP risk, thus providing insight into the effects of its underlying pathobiology. However, difficulties remain in the extrication of important and biologically relevant data from genetic discoveries related to psychiatric disorders such as BIP. There is an urgent need for an integrated and comprehensive online database with unified access to genetic and multi-omics data for in-depth data mining. Here, we developed the dbBIP, a database for BIP genetic research based on published data. The dbBIP consists of several modules, i.e.: (i) single nucleotide polymorphism (SNP) module, containing large-scale GWAS genetic summary statistics and functional annotation information relevant to risk variants; (ii) gene module, containing BIP-related candidate risk genes from various sources and (iii) analysis module, providing a simple and user-friendly interface to analyze one's own data. We also conducted extensive analyses, including functional SNP annotation, integration (including summary-data-based Mendelian randomization and transcriptome-wide association studies), co-expression, gene expression, tissue expression, protein-protein interaction and brain expression quantitative trait loci analyses, thus shedding light on the genetic causes of BIP. Finally, we developed a graphical browser with powerful search tools to facilitate data navigation and access. The dbBIP provides a comprehensive resource for BIP genetic research as well as an integrated analysis platform for researchers and can be accessed online at http://dbbip.xialab.info. Database URL:  http://dbbip.xialab.info.


Assuntos
Transtorno Bipolar , Estudo de Associação Genômica Ampla , Transtorno Bipolar/genética , Pesquisa em Genética , Humanos , Locos de Características Quantitativas , Software
18.
J Mater Chem B ; 10(20): 3906-3915, 2022 05 25.
Artigo em Inglês | MEDLINE | ID: mdl-35471408

RESUMO

Gelatin methacryloyl (GelMA) is a popular photocrosslinkable hydrogel that has been widely utilized in tissue engineering and regenerative medicine fields due to its excellent biocompatibility, biodegradability and cell response. However, the lack of mechanical properties limits its application. In the present study, a method for the preparation of a GelMA-GelMA (G-G) homogeneous double-network (DN) hydrogel to improve mechanical strength based on DLP 3D printing is proposed. The G-G DN hydrogel was fabricated and characterized in terms of microstructure, mechanical properties and rheological behavior. By modifying the degree of substitution (DS), the polymer concentration of double network crosslinking and the soak time, the novel G-G DN hydrogel could significantly improve the properties of strength, self-recovery and fatigue resistance. After all, the novel porous composite hydrogel (G-G DN hydrogel) could achieve more than twice that of the pure GelMA hydrogel, better fatigue resistance and printable ability. Therefore, it can be a potential choice of applications attracting great attention for its mechanical properties, great transmittance and biocompatibility.


Assuntos
Hidrogéis , Alicerces Teciduais , Materiais Biocompatíveis , Gelatina/química , Hidrogéis/química , Metacrilatos , Impressão Tridimensional , Alicerces Teciduais/química
19.
Front Oncol ; 12: 789283, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-35311131

RESUMO

N6-methyladenosine (m6A) modification is the most abundant modification in long noncoding RNAs (lncRNAs). Current studies have shown that the abnormal expression of m6A-related genes is closely associated with the tumorigenesis and progression of glioma. However, the role of m6A-related lncRNAs in glioma development is still unclear. Herein, we screened 566 m6A-related lncRNAs in glioma from The Cancer Genome Atlas (TCGA) database. The expression pattern of these lncRNAs could cluster samples into two groups, in which various classical tumor-related functions and the tumor immune microenvironment were significantly different. Subsequently, a nine-factor m6A-related lncRNA prognostic signature (MLPS) was constructed by using a LASSO regression analysis in the training set and was validated in the test set and independent datasets. The AUC values of the MLPS were 0.881, 0.918 and 0.887 for 1-, 3- and 5-year survival in the training set, respectively, and 0.856, 0.916 and 0.909 for 1-, 3-, and 5-year survival in the test set, respectively. Stratification analyses of the MLPS illustrated its prognostic performance in gliomas with different characteristics. Correlation analyses showed that the infiltrations of monocytes and tumor-associated macrophages (TAMs) were significantly relevant to the risk score in the MLPS. Moreover, we detected the expression of four MLPS factors with defined sequences in glioma and normal cells by using RT-PCR. Afterwards, we investigated the functions of LNCTAM34A (one of the MLPS factors) in glioma cells, which have rarely been reported. Via in vitro experiments, LNCTAM34A was demonstrated to promote the proliferation, migration and epithelial-mesenchymal transition (EMT) of glioma cells. Overall, our study revealed the critical role of m6A-related lncRNAs in glioma and elucidated that LNCTAM34A could promote glioma proliferation, migration and EMT.

20.
J Phys Chem B ; 125(33): 9621-9628, 2021 Aug 26.
Artigo em Inglês | MEDLINE | ID: mdl-34382804

RESUMO

Despite a great promise in the enhanced oil recovery in tight formations, CO2 flooding with surfactants is hindered due to the low surfactant solubility in supercritical CO2 (scCO2). Alcohol blending can increase the sodium bis(2-ethylhexyl) sulfosuccinate (AOT) solubility in scCO2. While this finding offers a promising solution to CO2 flooding in tight oil reservoirs, to the best of our knowledge, their working mechanism still remains elusive. Herein, we report a molecular dynamics simulation study to explore the working mechanism of alcohols in reverse micelle (RM) dispersity ("solubility") increment. The spontaneous aggregation process in two systems (System A consisting of AOT and scCO2; System B consisting of AOT, scCO2, and 10 wt % ethanol) are conducted under a typical tight oil reservoir condition (333 K and 200 bar). After 600 ns runs, the AOT molecules aggregate together and form rod-like RMs in System A, while form several small sphere-like RMs in System B. We observe that the aggregation process in System A occurs when two clusters approach each other end-to-end. More CO2 molecules are around the Na+ ion at the end of the clusters, which can be readily replaced by AOT molecules. On the other hand, the ethanol molecules can better solvate and surround Na+ ions, preventing the further aggregation of AOT clusters in System B. The potential of mean force calculations also reveal that while two small clusters formed by four AOT molecules attract each other in System A, they repel each other in System B. Our work should provide important insights into the design of scCO2-soluble surfactant formulas.

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