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1.
Neurobiol Dis ; 178: 106006, 2023 03.
Artigo em Inglês | MEDLINE | ID: mdl-36682503

RESUMO

Many fundamental questions on alcohol use disorder (AUD) are frequently difficult to address by examining a single brain structure, but should be viewed from the whole brain perspective. c-Fos is a marker of neuronal activation. Global brain c-Fos profiling in rodents represents a promising platform to study brain functional networks rearrangements in AUD. We used a mouse model of alcohol drinking in IntelliCage. We trained mice to voluntarily drink alcohol, next subjected them to withdrawal and alcohol reexposure. We have developed a dedicated image computational workflow to identify c-Fos-positive cells in three-dimensional images obtained after whole-brain optical clearing and imaging in the light-sheet microscope. We provide a complete list of 169 brain structures with annotated c-Fos expression. We analyzed functional networks, brain modularity and engram index. Brain c-Fos levels in animals reexposed to alcohol were different from both control and binge drinking animals. Structures involved in reward processing, decision making and characteristic for addictive behaviors, such as precommissural nucleus, nucleus Raphe, parts of colliculus and tecta stood out particularly. Alcohol reexposure leads to a massive change of brain modularity including a formation of numerous smaller functional modules grouping structures involved in addiction development. Binge drinking can lead to substantial functional remodeling in the brain. We provide a list of structures that can be used as a target in pharmacotherapy but also point to the networks and modules that can hold therapeutic potential demonstrated by a clinical trial in patients.


Assuntos
Alcoolismo , Consumo Excessivo de Bebidas Alcoólicas , Camundongos , Animais , Consumo Excessivo de Bebidas Alcoólicas/metabolismo , Encéfalo/metabolismo , Etanol , Consumo de Bebidas Alcoólicas/metabolismo , Proteínas Proto-Oncogênicas c-fos/metabolismo
2.
Oxid Med Cell Longev ; 2022: 1799839, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-36478989

RESUMO

Muscle larva of the parasitic nematode Trichinella spp. lives in a portion of muscle fibre transformed to a nurse cell (NC). Based on our previous transcriptomic studies, NC growth arrest was inferred to be accompanied by cellular senescence. In the current study, NC was proven to display the following markers of senescence: high senescence-associated ß-galactosidase activity, lipid deposition, DNA damage, and cell cycle inhibition. Moreover, the nuclear localization of Activator Protein 1 (c-Fos, c-Jun, and FosB), as well as the upregulation of numerous AP-1 target genes in the NC, remained in accord with AP-1 recently identified as a master transcription factor in senescence. An increase in reactive oxygen species generation and the upregulation of antioxidant defence enzymes, including glutathione peroxidases 1 and 3, catalase, superoxide dismutases 1 and 3, and heme oxygenase 1, indicated an ongoing oxidative stress to proceed in the NC. Interestingly, antioxidant defence enzymes localized not only to the NC but also to the larva. These results allowed us to hypothesize that oxidative stress accompanying muscle regeneration and larval antigenic properties lead to the transformation of a regenerating myofibre into a senescent cell. Cellular senescence apparently represents a state of metabolism that sustains the long-term existence of muscle larva and ultimately provides it with the antioxidant capacity needed during the next host colonization. Senotherapy, a therapeutic approach aimed at selective elimination of senescent cells, can thus be viewed as potentially effective in the treatment of trichinosis.


Assuntos
Trichinella , Animais , Larva , Fator de Transcrição AP-1 , Músculos , Senescência Celular , Mamíferos
3.
Int J Mol Sci ; 22(9)2021 Apr 30.
Artigo em Inglês | MEDLINE | ID: mdl-33946210

RESUMO

Novel evidence is presented allowing further clarification of the mechanism of the slow-binding thymidylate synthase (TS) inhibition by N4-hydroxy-dCMP (N4-OH-dCMP). Spectrophotometric monitoring documented time- and temperature-, and N4-OH-dCMP-dependent TS-catalyzed dihydrofolate production, accompanying the mouse enzyme incubation with N4-OH-dCMP and N5,10-methylenetetrahydrofolate, known to inactivate the enzyme by the covalent binding of the inhibitor, suggesting the demonstrated reaction to be uncoupled from the pyrimidine C(5) methylation. The latter was in accord with the hypothesis based on the previously presented structure of mouse TS (cf. PDB ID: 4EZ8), and with conclusions based on the present structure of the parasitic nematode Trichinella spiralis, both co-crystallized with N4-OH-dCMP and N5,10-methylenetetrahdrofolate. The crystal structure of the mouse TS-N4-OH-dCMP complex soaked with N5,10-methylenetetrahydrofolate revealed the reaction to run via a unique imidazolidine ring opening, leaving the one-carbon group bound to the N(10) atom, thus too distant from the pyrimidine C(5) atom to enable the electrophilic attack and methylene group transfer.


Assuntos
Desoxicitidina Monofosfato/análogos & derivados , Inibidores Enzimáticos/farmacologia , Timidilato Sintase/antagonistas & inibidores , Trichinella/enzimologia , Animais , Cristalografia por Raios X , Desoxicitidina Monofosfato/química , Desoxicitidina Monofosfato/farmacologia , Inibidores Enzimáticos/química , Humanos , Camundongos , Simulação de Acoplamento Molecular , Espectrofotometria , Timidilato Sintase/química , Timidilato Sintase/metabolismo , Triquinelose/parasitologia
4.
Int J Mol Sci ; 22(5)2021 Mar 06.
Artigo em Inglês | MEDLINE | ID: mdl-33800923

RESUMO

A homo-dimeric enzyme, thymidylate synthase (TS), has been a long-standing molecular target in chemotherapy. To further elucidate properties and interactions with ligands of wild-type mouse thymidylate synthase (mTS) and its two single mutants, H190A and W103G, spectroscopic and theoretical investigations have been employed. In these mutants, histidine at position 190 and tryptophan at position 103 are substituted with alanine and glycine, respectively. Several emission-based spectroscopy methods used in the paper demonstrate an especially important role for Trp 103 in TS ligands binding. In addition, the Advanced Poisson-Boltzmann Solver (APBS) results show considerable differences in the distribution of electrostatic potential around Trp 103, as compared to distributions observed for all remaining Trp residues in the mTS family of structures. Together, spectroscopic and APBS results reveal a possible interplay between Trp 103 and His190, which contributes to a reduction in enzymatic activity in the case of H190A mutation. Comparison of electrostatic potential for mTS complexes, and their mutants, with the substrate, dUMP, and inhibitors, FdUMP and N4-OH-dCMP, suggests its weaker influence on the enzyme-ligand interactions in N4OH-dCMP-mTS compared to dUMP-mTS and FdUMP-mTS complexes. This difference may be crucial for the explanation of the "abortive reaction" inhibitory mechanism of N4OH-dCMP towards TS. In addition, based on structural analyses and the H190A mutant capacity to form a denaturation-resistant complex with N4-OH-dCMP in the mTHF-dependent reaction, His190 is apparently responsible for a strong preference of the enzyme active center for the anti rotamer of the imino inhibitor form.


Assuntos
Nucleotídeos de Desoxiuracil/metabolismo , Modelos Teóricos , Espectrometria de Fluorescência/métodos , Eletricidade Estática , Timidilato Sintase/metabolismo , Substituição de Aminoácidos , Animais , Desoxicitidina Monofosfato/análogos & derivados , Desoxicitidina Monofosfato/metabolismo , Nucleotídeos de Desoxiuracil/química , Fluordesoxiuridilato/metabolismo , Camundongos , Modelos Moleculares , Análise Multivariada , Conformação Proteica , Timidilato Sintase/química
5.
Sensors (Basel) ; 21(2)2021 Jan 17.
Artigo em Inglês | MEDLINE | ID: mdl-33477345

RESUMO

Recently, there has been a fairly rapid increase in interest in the use of UAV swarms both in civilian and military operations. This is mainly due to relatively low cost, greater flexibility, and increasing efficiency of swarms themselves. However, in order to efficiently operate a swarm of UAVs, it is necessary to address the various autonomous behaviors of its constituent elements, to achieve cooperation and suitability to complex scenarios. In order to do so, a novel method for modeling UAV swarm missions and determining behavior for the swarm elements was developed. The proposed method is based on bigraphs with tracking for modeling different tasks and agents activities related to the UAV swarm mission. The key finding of the study is the algorithm for determining all possible behavior policies for swarm elements achieving the objective of the mission within certain assumptions. The design method is scalable, highly automated, and problem-agnostic, which allows to incorporate it in solving different kinds of swarm tasks. Additionally, it separates the mission modeling stage from behavior determining thus allowing new algorithms to be used in the future. Two simulation case studies are presented to demonstrate how the design process deals with typical aspects of a UAV swarm mission.

6.
Molecules ; 25(12)2020 Jun 23.
Artigo em Inglês | MEDLINE | ID: mdl-32586022

RESUMO

With the aim to identify novel inhibitors of parasitic nematode thymidylate synthase (TS), we screened in silico an in-house library of natural compounds, taking advantage of a model of nematode TS three-dimensional (3D) structure and choosing candidate compounds potentially capable of enzyme binding/inhibition. Selected compounds were tested as (i) inhibitors of the reaction catalyzed by TSs of different species, (ii) agents toxic to a nematode parasite model (C. elegans grown in vitro), (iii) inhibitors of normal human cell growth, and (iv) antitumor agents affecting human tumor cells grown in vitro. The results pointed to alvaxanthone as a relatively strong TS inhibitor that causes C. elegans population growth reduction with nematocidal potency similar to the anthelmintic drug mebendazole. Alvaxanthone also demonstrated an antiproliferative effect in tumor cells, associated with a selective toxicity against mitochondria observed in cancer cells compared to normal cells.


Assuntos
Antinematódeos/farmacologia , Antineoplásicos/farmacologia , Inibidores Enzimáticos/farmacologia , Timidilato Sintase/antagonistas & inibidores , Xantonas/farmacologia , Trifosfato de Adenosina/metabolismo , Animais , Caenorhabditis elegans/efeitos dos fármacos , Caspase 3/metabolismo , Caspase 7/metabolismo , Adesão Celular/efeitos dos fármacos , Morte Celular/efeitos dos fármacos , Linhagem Celular Tumoral , Proliferação de Células/efeitos dos fármacos , Ensaios de Seleção de Medicamentos Antitumorais , Inibidores Enzimáticos/química , Humanos , Concentração Inibidora 50 , Bibliotecas de Moléculas Pequenas , Timidilato Sintase/metabolismo , Testes de Toxicidade , Xantonas/química
7.
Arch Biochem Biophys ; 674: 108106, 2019 10 15.
Artigo em Inglês | MEDLINE | ID: mdl-31520592

RESUMO

In view of previous crystallographic studies, N4-hydroxy-dCMP, a slow-binding thymidylate synthase inhibitor apparently caused "uncoupling" of the two thymidylate synthase-catalyzed reactions, including the N5,10-methylenetetrahydrofolate one-carbon group transfer and reduction, suggesting the enzyme's capacity to use tetrahydrofolate as a cofactor reducing the pyrimidine ring C(5) in the absence of the 5-methylene group. Testing the latter interpretation, a possibility was examined of a TS-catalyzed covalent self-modification/self-inactivation with certain pyrimidine deoxynucleotides, including 5-fluoro-dUMP and N4-hydroxy-dCMP, that would be promoted by tetrahydrofolate and accompanied with its parallel oxidation to dihydrofolate. Electrophoretic analysis showed mouse recombinant TS protein to form, in the presence of tetrahydrofolate, a covalently bound, electrophoretically separable 5-fluoro-dUMP-thymidylate synthase complex, similar to that produced in the presence of N5,10-methylenetetrahydrofolate. Further studies of the mouse enzyme binding with 5-fluoro-dUMP/N4-hydroxy-dCMP by TCA precipitation of the complex on filter paper showed it to be tetrahydrofolate-promoted, as well as to depend on both time in the range of minutes and the enzyme molecular activity, indicating thymidylate synthase-catalyzed reaction to be responsible for it. Furthermore, the tetrahydrofolate- and time-dependent, covalent binding by thymidylate synthase of each 5-fluoro-dUMP and N4-hydroxy-dCMP was shown to be accompanied by the enzyme inactivation, as well as spectrophotometrically confirmed dihydrofolate production, the latter demonstrated to depend on the reaction time, thymidylate synthase activity and temperature of the incubation mixture, further documenting its catalytic character.


Assuntos
Fluordesoxiuridilato/metabolismo , Tetra-Hidrofolatos/metabolismo , Timidilato Sintase/metabolismo , Animais , Desoxicitidina Monofosfato/análogos & derivados , Desoxicitidina Monofosfato/metabolismo , Inibidores Enzimáticos/metabolismo , Ácido Fólico/análogos & derivados , Ácido Fólico/metabolismo , Camundongos , Ligação Proteica , Espectrofotometria Ultravioleta
8.
Sensors (Basel) ; 19(12)2019 Jun 21.
Artigo em Inglês | MEDLINE | ID: mdl-31234463

RESUMO

Application of the Internet of Things (IoT) in some critical areas (e.g., military) is limited mainly due to the lack of robust, secure, and trusted measures needed to ensure the availability, confidentiality, and integrity of information throughout its lifecycle. Considering the mostly limited resources of IoT devices connected by wireless networks and their dynamic placement in unsupervised or even hostile environments, security is a complex and considerable issue. In this paper, a framework which encompasses an approach to integrate some security measures to build a so-called "secure domain of sensors nodes" is proposed. The framework is based on the use of the Trusted Platform Modules (TPMs) in wireless sensor nodes. It encompasses an architecture of sensor nodes, their roles in the domain, and the data structures as well as the developed procedures which could be applied to generate the credentials for the sensor nodes, and subsequently, to build a local trust structure of each node as well as to build a trust relationship between a domain's nodes. The proposed solution ensures the authentication of sensor nodes and their resistance against unauthorized impact with the hardware/software configuration allowing protection against malware that can infect the software. The usefulness of the presented framework was confirmed experimentally.

9.
Mech Ageing Dev ; 170: 22-29, 2018 03.
Artigo em Inglês | MEDLINE | ID: mdl-28739375

RESUMO

The response of human colon cancer C85 cells to methotrexate takes the form of reversible growth arrest of the type of stress-induced senescence. In the present study it is shown that during C85 cell progression into methotrexate-induced senescence, dihydrofolate reductase, the primary intracellular target for the drug, is stabilized at the protein level and its enzymatic activity, assayed in crude cellular extracts, decreases by 2-fold. Dihydrofolate reductase inhibition results in an increase in dihydrobiopterin level and an ultimate decrease in the tetrahydrobiopterin: dihydrobiopterin ratio in senescent cells. Endothelial nitric oxide synthase expression declines. Despite concomitant upregulation of inducible nitric oxide synthase expression, no nitric oxide generation in senescent cells is detected. Progressing oxidative stress accompanies establishment of the state of senescence. DNA damage, in the form of double strand-breaks, occurs at the highest level at the senescence initiation phase and decreases as cells progress into the senescence maintenance phase.


Assuntos
Senescência Celular/efeitos dos fármacos , Neoplasias do Colo/metabolismo , Metotrexato/farmacologia , Estresse Oxidativo/efeitos dos fármacos , Linhagem Celular Tumoral , Neoplasias do Colo/patologia , Quebras de DNA de Cadeia Dupla , Humanos , Proteínas de Neoplasias/metabolismo
10.
Parasit Vectors ; 9(1): 483, 2016 09 02.
Artigo em Inglês | MEDLINE | ID: mdl-27589866

RESUMO

BACKGROUND: The nurse cell (NC) constitutes in mammalian skeletal muscles a confined intracellular niche to support the metabolic needs of muscle larvae of Trichinella spp. encapsulating species. The main biological functions of NC were identified as hypermitogenic growth arrest and pro-inflammatory phenotype, both inferred to depend on AP-1 (activator protein 1) transcription factor. Since those functions, as well as AP-1 activity, are known to be regulated among other pathways, also by Wnt (Wingless-Type of Mouse Mammary Tumor Virus Integration Site) signaling, transcription profiling of molecules participating in Wnt signaling cascades in NC, was performed. METHODS: Wnt signaling-involved gene expression level was measured by quantitative RT-PCR approach with the use of Qiagen RT(2) Profiler PCR Arrays and complemented by that obtained by searching microarray data sets characterizing NC transcriptome. RESULTS: The genes involved in inhibition of canonical Wnt/ß-catenin signaling cascade as well as leading to ß-catenin degradation were found expressed in NC at high level, indicating inhibition of this cascade activity. High expression in NC of genes transmitting the signal of Wnt non-canonical signaling cascades leading to activation of AP-1 transcription factor, points to predominant role of non-canonical Wnt signaling in a long term maintenance of NC biological functions. CONCLUSIONS: Canonical Wnt/ß-catenin signaling cascade is postulated to play a role at the early stages of NC formation when muscle regeneration process is triggered. Following mis-differentiation of infected myofiber and setting of NC functional specificity, are inferred to be controlled among other pathways, by Wnt non-canonical signaling cascades.


Assuntos
Proteínas de Helminto/metabolismo , Trichinella/metabolismo , Triquinelose/parasitologia , Proteínas Wnt/metabolismo , beta Catenina/metabolismo , Animais , Proteínas de Helminto/genética , Humanos , Células Musculares/metabolismo , Transdução de Sinais , Trichinella/citologia , Trichinella/genética , Proteínas Wnt/genética , beta Catenina/genética
11.
Biochim Biophys Acta ; 1854(12): 1922-1934, 2015 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-26315778

RESUMO

Thymidylate synthase (TS) may undergo phosphorylation endogenously in mammalian cells, and as a recombinant protein expressed in bacterial cells, as indicated by the reaction of purified enzyme protein with Pro-Q® Diamond Phosphoprotein Gel Stain (PGS). With recombinant human, mouse, rat, Trichinella spiralis and Caenorhabditis elegans TSs, expressed in Escherichia coli, the phosphorylated, compared to non-phosphorylated recombinant enzyme forms, showed a decrease in Vmax(app), bound their cognate mRNA (only rat enzyme studied), and repressed translation of their own and several heterologous mRNAs (human, rat and mouse enzymes studied). However, attempts to determine the modification site(s), whether endogenously expressed in mammalian cells, or recombinant proteins, did not lead to unequivocal results. Comparative ESI-MS/analysis of IEF fractions of TS preparations from parental and FdUrd-resistant mouse leukemia L1210 cells, differing in sensitivity to inactivation by FdUMP, demonstrated phosphorylation of Ser(10) and Ser(16) in the resistant enzyme only, although PGS staining pointed to the modification of both L1210 TS proteins. The TS proteins phosphorylated in bacterial cells were shown by (31)P NMR to be modified only on histidine residues, like potassium phosphoramidate (KPA)-phosphorylated TS proteins. NanoLC-MS/MS, enabling the use of CID and ETD peptide fragmentation methods, identified several phosphohistidine residues, but certain phosphoserine and phosphothreonine residues were also implicated. Molecular dynamics studies, based on the mouse TS crystal structure, allowed one to assess potential of several phosphorylated histidine residues to affect catalytic activity, the effect being phosphorylation site dependent.


Assuntos
Timidilato Sintase/metabolismo , Animais , Linhagem Celular Tumoral , Camundongos , Fosforilação , Coelhos
12.
Bioorg Med Chem ; 22(15): 3906-12, 2014 Aug 01.
Artigo em Inglês | MEDLINE | ID: mdl-24999002

RESUMO

By seeking new stable boron-containing nucleoside derivatives, potential BNCT boron delivery agents, a novel synthetic approach was tested, aimed at a boron attachment via a single bond to an aliphatic carbon of sp(3) hybridization. The latter allowed successful modification of deoxycytidine in the reaction with 2-(iodomethyl)-4,4,5,5-tetramethyl-1,3,2-dioxaborolane of the deoxynucleoside amino group. For new compounds, detailed NMR, LDI HRMS (Laser Desorption/Ionization High-Resolution Mass Spectrometry) analyses along with in vivo phosphorylation studies, toxicity assays and DFT modelling are presented.


Assuntos
Boro/química , Desoxicitidina/química , Linhagem Celular Tumoral , Proliferação de Células/efeitos dos fármacos , Desoxicitidina/síntese química , Desoxicitidina/toxicidade , Humanos , Espectroscopia de Ressonância Magnética , Fosforilação/efeitos dos fármacos , Piridinas/química , Teoria Quântica
13.
Mol Biochem Parasitol ; 183(1): 63-9, 2012 May.
Artigo em Inglês | MEDLINE | ID: mdl-22348950

RESUMO

Localization of thymidylate synthase protein in Trichinella spiralis and Caenorhabditis elegans development was followed with the use of confocal microscopy, revealing similar expression patterns in both nematode species. In T. spiralis premature muscle larvae and C. elegans dauer, L3 and L4 larvae, thymidylate synthase was detected in the nerve ring and gonad primordia, as well as T. spiralis stichosome and C. elegans pharyngeal glandular cells. In developmentally arrested T. spiralis muscle larvae, the enzyme was found localized to the gonad primordia and stichosome. High enzyme level was also observed in the embryos developing in uteri of T. spiralis female adult and C. elegans hermaphrodite forms. In the case of T. spiralis adult forms, thymidylate synthase was detected in stichosome, along esophagus wall, as well as in egg and sperm cells. While the enzyme protein present in the embryos remains in accord with its known association with proliferating systems, thymidylate synthase presence in the nerve ring, and reproductive and secretory (T. spiralis stichosomal and C. elegans pharyngeal glandular cells) systems, points to a state of cell cycle-arrest, also known to preserve the enzyme protein.


Assuntos
Proteínas de Caenorhabditis elegans/metabolismo , Caenorhabditis elegans/enzimologia , Larva/enzimologia , Timidilato Sintase/metabolismo , Trichinella spiralis/enzimologia , Animais , Caenorhabditis elegans/citologia , Caenorhabditis elegans/genética , Caenorhabditis elegans/crescimento & desenvolvimento , Proteínas de Caenorhabditis elegans/genética , Esôfago/citologia , Esôfago/enzimologia , Feminino , Regulação da Expressão Gênica no Desenvolvimento , Larva/citologia , Larva/genética , Larva/crescimento & desenvolvimento , Masculino , Microscopia Confocal , Sistema Nervoso/citologia , Sistema Nervoso/enzimologia , Sistema Nervoso/crescimento & desenvolvimento , Especificidade de Órgãos , Óvulo/citologia , Óvulo/enzimologia , Óvulo/crescimento & desenvolvimento , Transporte Proteico , Espermatócitos/citologia , Espermatócitos/enzimologia , Espermatócitos/crescimento & desenvolvimento , Timidilato Sintase/genética , Trichinella spiralis/citologia , Trichinella spiralis/genética , Trichinella spiralis/crescimento & desenvolvimento
14.
Org Biomol Chem ; 10(2): 323-31, 2012 Jan 14.
Artigo em Inglês | MEDLINE | ID: mdl-22072032

RESUMO

Highly purified preparations of thymidylate synthase, isolated from calf thymus, and L1210 parental and FdUrd-resistant cells, were found to be nitrated, as indicated by a specific reaction with anti-nitro-tyrosine antibodies, suggesting this modification to appear endogenously in normal and tumor tissues. Each human, mouse and Ceanorhabditis elegans recombinant TS preparation, incubated in vitro in the presence of NaHCO(3), NaNO(2) and H(2)O(2) at pH 7.5, underwent tyrosine nitration, leading to a V(max)(app) 2-fold lower following nitration of 1 (with human or C. elegans TS) or 2 (with mouse TS) tyrosine residues per monomer. Enzyme interactions with dUMP, meTHF or 5-fluoro-dUMP were not distinctly influenced. Nitration under the same conditions of model tripeptides of a general formula H(2)N-Gly-X-Gly-COOH (X = Phe, Tyr, Trp, Lys, Arg, His, Ser, Thr, Cys, Gly), monitored by NMR spectroscopy, showed formation of nitro-species only for H-Gly-Tyr-Gly-OH and H-Gly-Phe-Gly-OH peptides, the chemical shifts for nitrated H-Gly-Tyr-Gly-OH peptide being in a very good agreement with the strongest peak found in (15)N-(1)H HMBC spectrum of nitrated protein. MS analysis of nitrated human and C. elegans proteins revealed several thymidylate synthase-derived peptides containing nitro-tyrosine (at positions 33, 65, 135, 213, 230, 258 and 301 in the human enzyme) and oxidized cysteine (human protein Cys(210), with catalytically critical Cys(195) remaining apparently unmodified) residues.


Assuntos
Timidilato Sintase/metabolismo , Tirosina/metabolismo , Animais , Caenorhabditis elegans/enzimologia , Bovinos , Linhagem Celular Tumoral , Humanos , Camundongos , Proteínas Recombinantes/química , Proteínas Recombinantes/isolamento & purificação , Proteínas Recombinantes/metabolismo , Timidilato Sintase/química , Timidilato Sintase/isolamento & purificação , Timo/enzimologia , Tirosina/química
15.
Cell Cycle ; 7(14): 2167-78, 2008 Jul 15.
Artigo em Inglês | MEDLINE | ID: mdl-18635964

RESUMO

Nurse cell (NC), formed from skeletal muscle cells upon infection with parasitic nematode trichina, presents a rare system of long-term suspension in the cell cycle. Signaling pathways and general biological functions of Trichinella spiralis NC, inferred from network analysis of competitive expression microarray data (NC vs. C2C12 myoblasts and myotubes), performed in Ingenuity Pathways Analysis (IPA) software and confirmed by Real-Time PCR, are presented. Assuming 4N DNA content in NC nuclei, its cell cycle arrest is identified herein as a hypermitogenic of G(1)-like type, accompanied by induction of senescence, underpinned by increased expression of p15, p16 and p57 cell cycle inhibitors, as well as overexpression of senescence-associated, beta-galactosidase and numerous secretory factors. Growth factor signaling, with predominant role of EGF, cytokine signaling and G-protein-coupled receptor signaling, are suggested as dominant NC signal transduction pathways. Fos, FosB, STAT6, CREBL2, ID4 and retinoic acid dependent nuclear receptors appear to be the main factors determining NC specific gene transcription. Antigen presentation, complement signaling and beta-amyloid processing pathways are also identified as operating in NC. In general, NC pathology is found to pertain to cancer, as well as other, including immunological and neurological, disorders.


Assuntos
Ciclo Celular , Modelos Biológicos , Trichinella/citologia , Animais , Ciclo Celular/genética , Linhagem Celular , Fase G2/genética , Regulação da Expressão Gênica , Genes de Helmintos , Humanos , Camundongos , Camundongos Endogâmicos BALB C , Mitose/genética , Fibras Musculares Esqueléticas/metabolismo , Mioblastos/metabolismo , Fase S/genética , Transdução de Sinais/genética , Software , Trichinella/genética
16.
Biochem Biophys Res Commun ; 362(1): 37-43, 2007 Oct 12.
Artigo em Inglês | MEDLINE | ID: mdl-17692822

RESUMO

A series of 2'-fluoro-substituted dUMP/FdUMP analogues were synthesized, their interaction with human recombinant thymidylate synthase investigated, and structural (1)H and (19)F NMR study of the corresponding nucleosides performed. While 2'-F-dUMP (fluorine in the "down" configuration), in striking contrast to 2'-F-ara-UMP (fluorine in the "up" configuration) and 2',2''-diF-dUMP, showed substrate activity, 2'-F-ara-UMP and 2',2''-diF-dUMP were classic inhibitors, and 2',5-diF-ara-UMP behaved as a strong slow-binding inhibitor, suggesting the 2'-F substituent in the "up" position to interfere with the active center cysteine thiol addition to the pyrimidine C(6) and the pyrimidine C(5)-F to prevent this interference. In support, the direct through space heteronuclear coupling J(HF) was observed for the fluorine "up" derivatives, 2'-F-ara-U and 2',5-diF-ara-U, causing the splitting of the H(6) resonance lines. The absence of such splitting in 2',2''-diF-dUrd, indicating an unusual orientation of the base in relation to the furanose, was associated with an exceptionally weak interaction with the enzyme.


Assuntos
Flúor/química , Fluordesoxiuridilato/química , Espectroscopia de Ressonância Magnética/métodos , Timidilato Sintase/química , Carboidratos/química , Cisteína/química , Nucleotídeos de Desoxiuracil/química , Furanos/química , Glicosídeos/química , Humanos , Cinética , Modelos Químicos , Conformação Molecular , Proteínas Recombinantes/química , Compostos de Sulfidrila/química
17.
Fungal Genet Biol ; 44(7): 691-700, 2007 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-17257865

RESUMO

Methylenetetrahydrofolate reductase (MTHFR) catalyzes the reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate, a co-substrate in the synthesis of methionine from homocysteine. We have cloned and characterized two Aspergillus nidulans genes encoding MTHFRs: metA and metF. Mutations in either gene result in methionine requirement; the metA-encoded enzyme is responsible for only 10-15% of total MTHFR activity. These two enzymes belong to different classes of MTHFRs. Mutations in metA but not in the metF gene are suppressed by mutations resulting in enhancement of homocysteine synthesis. The expression of both genes is up-regulated by homocysteine.


Assuntos
Aspergillus nidulans/genética , Regulação Fúngica da Expressão Gênica , Homocisteína , Metilenotetra-Hidrofolato Redutase (NADPH2)/genética , Genes Fúngicos , Dados de Sequência Molecular , Regulação para Cima
18.
Acta Biochim Pol ; 53(1): 189-98, 2006.
Artigo em Inglês | MEDLINE | ID: mdl-16505899

RESUMO

Thymidylate synthase purified from 5-fluoro-dUrd-resistant mouse leukemia L1210 cells (TSr) was less sensitive to slow-binding inhibition by 5-fluoro-dUMP than the enzyme from the parental cells (TSp), both enzyme forms differing also in sensitivity to several other dump analogues, apparent molecular weights of monomer and dimer, and temperature dependence of the catalyzed reaction. Direct sequencing of products obtained from RT-PCR, performed on total RNA isolated from the parental and 5-fluoro-dUrd-resistant cells, proved both nucleotide sequences to be identical to the mouse thymidylate synthase coding sequence published earlier (NCBI protein database access no. NP_067263). This suggests that the altered properties of TSr are caused by a factor different than protein mutation, presumably posttranslational modification. As a possibility of rat thymidylate synthase phosphorylation has been recently demonstrated (Samsonoff et al. (1997) J Biol Chem 272: 13281), the mouse enzyme amino-acid sequence was analysed, revealing several potential phosphorylation sites. In order to test possible influence of the protein phosphorylation state on enzymatic properties, endogenous TSp and TSr were purified in the presence of inhibitors of phosphatases. Although both enzyme forms were phosphorylated, as shown by electrophoretical separation followed by phosphoprotein detection, the extent of phosphorylation was apparently similar. However, the same two purified enzyme preparations, compared to the corresponding preparations purified in the absence of phosphatase inhibitors, showed certain properties, including sensitivity to the slow-binding inhibition by FdUMP, altered. Thus properties dependence on phosphorylation was indicated.


Assuntos
Resistencia a Medicamentos Antineoplásicos , Leucemia/enzimologia , Timidilato Sintase/química , Timidilato Sintase/genética , Animais , Antimetabólitos Antineoplásicos/farmacologia , Linhagem Celular Tumoral , Floxuridina/farmacologia , Regulação Neoplásica da Expressão Gênica , Camundongos , Mutação , Fosforilação , Ligação Proteica , Processamento de Proteína Pós-Traducional
19.
Exp Parasitol ; 112(3): 158-63, 2006 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-16356496

RESUMO

To establish whether NADPH oxidase activation, responsible for previously demonstrated Trichinella spiralis-induced respiratory burst, results from assembling of membrane and cytosolic NADPH oxidase components and/or increased expression of the oxidase complex proteins, the superoxide anion production and expression of the regulatory p47(phox) subunit were measured in cultured alveolar macrophages obtained during T. spiralis infection of guinea pigs. The results demonstrate for the first time helminth parasite-infection-induced stimulation of NADPH oxidase p47(phox) subunit protein expression, with the effect being decreased by in vivo treatment with cyclosporin A, previously shown to inhibit T. spiralis infection-induced respiratory burst in guinea-pig alveolar macrophages. However, although the expression of the p47(phox) subunit protein remained induced during secondary infection, it was accompanied by superoxide anion production that was significantly suppressed in comparison with that observed during primary infection, suggesting suppressive action of T. spiralis on host's alveolar macrophage immune response, presumably connected with NADPH oxidase complex activity attenuation.


Assuntos
Macrófagos Alveolares/parasitologia , Fosfoproteínas/biossíntese , Trichinella spiralis/fisiologia , Animais , Células Cultivadas , Ciclosporina/farmacologia , Cobaias , Imunossupressores/farmacologia , Macrófagos Alveolares/efeitos dos fármacos , Macrófagos Alveolares/metabolismo , NADPH Oxidases/metabolismo , Explosão Respiratória , Superóxidos/metabolismo
20.
Endocr Res ; 30(1): 37-46, 2004 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-15098918

RESUMO

UNLABELLED: The activity of thymidine kinase (TK-EC 2.7.1.21)--an enzyme functioning as a part of the pyrimidine salvage pathway of DNA synthesis--is closely related to growth processes. The aim of the study was to measure TK activity in homogenates of human thyroid tissue of the following types: non-toxic nodular goiter (NTNG)--macroscopically unchanged tissue, non-toxic adenoma (NTA), and toxic adenoma (TA) (obtained from patients, who--before the surgery--had been treated with thyrostatic drugs for thyrotoxicosis). Thyroid tissue was obtained from female patients subjected to subtotal thyroidectomy at the Department of Endocrine Surgery, Medical University of Lódz. Thyroid homogenates were incubated in the presence of epidermal growth factor (EGF), used in five different concentrations (0.1 ng/ml, 1 ng/ml, 10 ng/ml, 100 ng/ml, 1000 ng/ml). TK activity was estimated by chromatographic measurements of the amount of the main reaction product--deoxythymidine monophosphate. RESULTS: 1) We did not observe any significant difference between TK activity in the homogenates of the thyroid tissue collected from NTNG and NTA; TK activity was clearly higher in the homogenates of adenomatous tissue, collected from the patients with TA; 2) EGF increased TK activity in the homogenates of the macroscopically unchanged tissue, collected--during surgery--from the patients with NTNG, as well as in homogenates of thyroid tissue from NTA; 3) In case of hyperactive thyroid tissue, obtained from TA, EGF tended to increase TK activity, however, without any statistical differences. Our results confirm TK increased activity in hyperactive thyroid tissue. At the same time, the obtained data suggest a certain role of EGF in goiter formation in humans.


Assuntos
Adenoma Oxífilo/enzimologia , Timidina Quinase/metabolismo , Neoplasias da Glândula Tireoide/enzimologia , Animais , Ativação Enzimática/efeitos dos fármacos , Fator de Crescimento Epidérmico/farmacologia , Feminino , Bócio Nodular/enzimologia , Humanos
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