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1.
Proc Natl Acad Sci U S A ; 121(45): e2411419121, 2024 Nov 05.
Artigo em Inglês | MEDLINE | ID: mdl-39467137

RESUMO

Historically, economic growth has been closely coupled to carbon emissions responsible for climate change, but to stabilize global mean temperature, net-zero carbon emissions are necessary. Some economies have begun to reduce emissions while continuing to grow, but this decoupling is not fast enough to achieve global climate targets. Subnational climate actions seem to be crucial for the achievement of these targets. Here, we uncover the effectiveness of subnational efforts by estimating decoupling rates and CO2 emission intensities over the last three decades for over 1,500 subnational regions, encompassing 85% of global emissions, using global data on reported economic output and gridded production-based emissions. Thirty percent of regions with available data have fully decoupled, with higher-income and historically carbon-intensive regions exhibiting higher rates of decoupling and declining emission intensity. Countries of the Organization for Economic Co-operation and Development with greater spending on subnational climate actions show higher decoupling rates, as do subnational regions in EU countries where climate policies have been implemented, highlighting the effectiveness of subnational policies. Moreover, subnational analysis reveals greater variance of decoupling rates within national boundaries than between them and that countries with weaker governance typically show higher variance of decoupling within their borders. If recent rates of production-based carbon decoupling continue, less than half of subnational regions would reach net-zero before 2050, even when accounting for observed acceleration via socioeconomic development and assuming no interregional carbon leakage.

2.
mBio ; 15(3): e0301023, 2024 Mar 13.
Artigo em Inglês | MEDLINE | ID: mdl-38319109

RESUMO

In the last decade, the immense growth in the field of bacterial small RNAs (sRNAs), along with the biotechnological breakthroughs in Deep Sequencing permitted the deeper understanding of sRNA-RNA interactions. However, microbiology is currently lacking a thoroughly curated collection of this rapidly expanding universe. We present Agnodice (https://dianalab.e-ce.uth.gr/agnodice), our effort to systematically catalog and annotate experimentally supported bacterial sRNA-RNA interactions. Agnodice, for the first time, incorporates thousands of bacterial sRNA-RNA interactions derived from a diverse set of experimental methodologies including state-of-the-art Deep Sequencing interactome identification techniques. It comprises 39,600 entries which are annotated at strain-level resolution and pertain to 399 sRNAs and 12,137 target RNAs identified in 71 bacterial strains. The database content is exclusively experimentally supported, incorporating interactions derived via low yield as well as state-of-the-art high-throughput methods. The entire content of the database is freely accessible and can be directly downloaded for further analysis. Agnodice will serve as a valuable source, enabling microbiologists to form novel hypotheses, design/identify novel sRNA-based drug targets, and explore the therapeutic potential of microbiomes from the perspective of small regulatory RNAs.IMPORTANCEAgnodice (https://dianalab.e-ce.uth.gr/agnodice) is an effort to systematically catalog and annotate experimentally supported bacterial small RNA (sRNA)-RNA interactions. Agnodice, for the first time, incorporates thousands of bacterial sRNA-RNA interactions derived from a diverse set of experimental methodologies including state-of-the-art Next Generation Sequencing interactome identification techniques.


Assuntos
RNA Bacteriano , Pequeno RNA não Traduzido , RNA Bacteriano/genética , Pequeno RNA não Traduzido/genética , Bactérias/genética , Regulação Bacteriana da Expressão Gênica
3.
Nucleic Acids Res ; 52(D1): D304-D310, 2024 Jan 05.
Artigo em Inglês | MEDLINE | ID: mdl-37986224

RESUMO

TarBase is a reference database dedicated to produce, curate and deliver high quality experimentally-supported microRNA (miRNA) targets on protein-coding transcripts. In its latest version (v9.0, https://dianalab.e-ce.uth.gr/tarbasev9), it pushes the envelope by introducing virally-encoded miRNAs, interactions leading to target-directed miRNA degradation (TDMD) events and the largest collection of miRNA-gene interactions to date in a plethora of experimental settings, tissues and cell-types. It catalogues ∼6 million entries, comprising ∼2 million unique miRNA-gene pairs, supported by 37 experimental (high- and low-yield) protocols in 172 tissues and cell-types. Interactions are annotated with rich metadata including information on genes/transcripts, miRNAs, samples, experimental contexts and publications, while millions of miRNA-binding locations are also provided at cell-type resolution. A completely re-designed interface with state-of-the-art web technologies, incorporates more features, and allows flexible and ingenious use. The new interface provides the capability to design sophisticated queries with numerous filtering criteria including cell lines, experimental conditions, cell types, experimental methods, species and/or tissues of interest. Additionally, a plethora of fine-tuning capacities have been integrated to the platform, offering the refinement of the returned interactions based on miRNA confidence and expression levels, while boundless local retrieval of the offered interactions and metadata is enabled.


Assuntos
Bases de Dados de Ácidos Nucleicos , MicroRNAs , Genes Virais/genética , Internet , MicroRNAs/genética , MicroRNAs/metabolismo , Animais
4.
Int J Med Inform ; 170: 104966, 2023 02.
Artigo em Inglês | MEDLINE | ID: mdl-36542901

RESUMO

OBJECTIVES: Diagnosis of Mild Cognitive Impairment (MCI) requires lengthy diagnostic procedures, typically available at tertiary Health Care Centers (HCC). This prospective study evaluated a flexible Machine Learning (ML) framework toward identifying persons with MCI or dementia based on information that can be readily available in a primary HC setting. METHODS: Demographic and clinical data, informant ratings of recent behavioral changes, self-reported anxiety and depression symptoms, subjective cognitive complaints, and Mini Mental State Examination (MMSE) scores were pooled from two aging cohorts from the island of Crete, Greece (N = 763 aged 60-93 years) comprising persons diagnosed with MCI (n = 277) or dementia (n = 153), and cognitively non-impaired persons (CNI, n = 333). A Balanced Random Forest Classifier was used for classification and variable importance-based feature selection in nested cross-validation schemes (CNI vs MCI, CNI vs Dementia, MCI vs Dementia). Global-level model-agnostic analyses identified predictors displaying nonlinear behavior. Local level agnostic analyses pinpointed key predictor variables for a given classification result after statistically controlling for all other predictors in the model. RESULTS: Classification of MCI vs CNI was achieved with improved sensitivity (74 %) and comparable specificity (73 %) compared to MMSE alone (37.2 % and 94.3 %, respectively). Additional high-ranking features included age, education, behavioral changes, multicomorbidity and polypharmacy. Higher classification accuracy was achieved for MCI vs Dementia (sensitivity/specificity = 87 %) and CNI vs Dementia (sensitivity/specificity = 94 %) using the same set of variables. Model agnostic analyses revealed notable individual variability in the contribution of specific variables toward a given classification result. CONCLUSIONS: Improved capacity to identify elderly with MCI can be achieved by combining demographic and medical information readily available at the PHC setting with MMSE scores, and informant ratings of behavioral changes. Explainability at the patient level may help clinicians identify specific predictor variables and patient scores to a given prediction outcome toward personalized risk assessment.


Assuntos
Disfunção Cognitiva , Demência , Medicina Geral , Idoso , Humanos , Demência/diagnóstico , Demência/epidemiologia , Estudos Prospectivos , Disfunção Cognitiva/diagnóstico , Disfunção Cognitiva/epidemiologia , Disfunção Cognitiva/psicologia , Envelhecimento , Sensibilidade e Especificidade
5.
Dev Psychol ; 53(1): 50-62, 2017 01.
Artigo em Inglês | MEDLINE | ID: mdl-28026191

RESUMO

Postnatal maternal depression is associated with poorer child emotional and behavioral functioning, but it is unclear whether this occurs following brief episodes or only with persistent depression. Little research has examined the relation between postnatal anxiety and child outcomes. The present study examined the role of postnatal major depressive disorder (MDD) and generalized anxiety disorder (GAD) symptom chronicity on children's emotional and behavioral functioning at 24 months. Following postnatal screening mothers (n = 296) were identified as having MDD, GAD, MDD and GAD, or no disorder at 3 months postnatal; the average age was 32.3 (SD = 5.0), 91.9% self-identified as Caucasian, and 62.2% were married. Maternal disorder symptom severity was assessed by questionnaires and structured interview at 3, 6, 10, 14, and 24 months postpartum. At 24 months, child emotional negativity and behavior were assessed using questionnaires and by direct observation. Latent trait-state-occasion modeling was used to represent maternal disorder symptom chronicity; both stable trait and time-specific occasion portions of maternal symptomatology were examined in relation to child outcomes. Only the stable trait portion of maternal MDD and GAD symptom severity were related to maternal report of child behavior problems and higher levels of emotional negativity. Persistent maternal MDD, but not GAD, symptom severity was related to higher levels of child emotional negativity as measured observationally. These data suggest that children's behavior problems and emotional negativity are adversely affected by persistent maternal depression, and possibly anxiety. This has implications for interventions to prevent negative effects of postnatal psychopathology on children. (PsycINFO Database Record


Assuntos
Transtornos de Ansiedade , Desenvolvimento Infantil , Depressão Pós-Parto , Transtorno Depressivo Maior , Emoções , Comportamento Problema , Adulto , Pré-Escolar , Feminino , Humanos , Entrevista Psicológica , Estudos Longitudinais , Masculino , Modelos Psicológicos , Modelos Estatísticos , Relações Mãe-Filho , Escalas de Graduação Psiquiátrica , Inquéritos e Questionários , Fatores de Tempo
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