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1.
Se Pu ; 42(11): 1087-1093, 2024 Nov.
Artigo em Chinês | MEDLINE | ID: mdl-39449516

RESUMO

Metal organic frameworks (MOFs) are crystalline compounds composed of metal ions (or metal clusters) and organic ligands. Chiral MOFs have been successfully utilized as novel materials for the separation of chiral enantiomers by chromatography, demonstrating excellent chiral separation performance. In this study, a chiral MOF-modified silica monolithic capillary column was used for pressurized capillary electrochromatography. First, a chiral MOF (Co-glycyl-L-glutamic acid, Co-L-GG) was synthesized. This MOF was then used to prepare a chiral capillary monolithic column via a one-step in situ polymerization method. The optimal conditions for preparing the chiral capillary monolithic column were determined as follows: Co-L-GG amount, 5 mg; polyethylene glycol amount, 0.96 mg; tetramethoxysilane dosage, 3.6 mL; trimethoxymethylsilane dosage, 0.4 mL. Next, the effects of the separation conditions on the separation of chiral drugs were investigated. Under the conditions of an applied voltage of -20 kV and a mobile phase consisting of acetonitrile and 20 mmol/L disodium hydrogen phosphate (80∶20, v/v), six chiral drugs were separated within 3 min, with baseline separation achieved for amlodipine, fluvastatin, and tryptophan. Moreover, the prepared chiral capillary monolithic column exhibited good reproducibility and stability. Finally, molecular docking studies were conducted using AutoDock to explore the chiral recognition mechanism, and the results were analyzed using Discovery Studio. The results indicated that larger differences in binding free energy between Co-L-GG and the enantiomers of the chiral drugs were correlated with higher enantioselectivity factors. However, this correlation did not necessarily lead to an increase in resolution. Co-L-GG, which is enriched with primary amines, secondary amines, and carbonyl groups, demonstrated enantiomeric recognition capability. In conclusion, this study demonstrates that chiral MOFs can be effectively used as chiral functional monomers to prepare chiral monolithic capillary columns, highlighting their significant potential for the separation and analysis of chiral compounds. The comprehensive exploration of the synthesis, characterization, and applications of these MOFs will help provide valuable insights into the development of advanced separation technologies.


Assuntos
Dióxido de Silício , Estereoisomerismo , Dióxido de Silício/química , Eletrocromatografia Capilar/métodos , Estruturas Metalorgânicas/química , Preparações Farmacêuticas/química , Preparações Farmacêuticas/isolamento & purificação
2.
ACS Appl Mater Interfaces ; 15(47): 54977-54985, 2023 Nov 29.
Artigo em Inglês | MEDLINE | ID: mdl-37963803

RESUMO

Covalent organic frameworks (COFs) are promising as stationary phases for gas chromatography (GC). The successful anchoring of COFs to the inner walls of the capillary with good uniformity is an important prerequisite to ensure the excellent separation performance of columns. However, current methods for the fabrication of COF-based capillary columns cannot always meet this requirement when faced with different COFs, which hampers the further development of COF-based GC stationary phases. Here, we show a general two-step method for the fabrication of COF-bound capillary column. The first step enables the formation of uniform amorphous polymer layer on the inner walls of capillary, while the second step allows the facile transformation of the amorphous polymer layer into a highly crystalline COF layer. COF-bound capillary columns with different framework structures were fabricated successfully by the developed two-step method. Impressively, the COF layers bound on the inner walls of these capillary columns showed good uniformity and high crystallinity. More importantly, as an example, the fabricated Tab-DHTA-bound capillary column showed good resolution (R > 1.5) and high column efficiency (700-39,663 plates m-1) for the tested isomers of ethylbenzene, xylene, dichlorobenzene, chlorotoluene, pinene, 1,3-dichloropropene, and propylbenzene with good precision (RSD, run-to-run, n = 5) (retention time, 0.2-0.6%; peak area, 0.5-1.1%; and peak height, 0.5-1.4%). In general, the fabricated Tab-DHTA-bound capillary column exhibited better performance for the separation isomers than commercial columns DB-5 and HP-FFAP. These results indicate that the two-step method is an efficient way to fabricate the COF-bound capillary column with excellent separation performance.

3.
J Chromatogr A ; 1707: 464248, 2023 Sep 27.
Artigo em Inglês | MEDLINE | ID: mdl-37598532

RESUMO

Surface silanols (Si-OH) play a vital role on fused silica surfaces in chromatography. Here, we used an atmospheric-pressure, gas-phase reactor to modify the inner surface of a gas chromatography, fused silica capillary column (0.53 mm ID) with a small, reactive silane (tris(dimethylamino)methylsilane, TDMAMS). The deposition of TDMAMS on planar witness samples around the capillary was confirmed with X-ray photoelectron spectroscopy (XPS), ex situ spectroscopic ellipsometry (SE), and wetting. The number of surface silanols on unmodified and TDMAMS-modified native oxide-terminated silicon were quantified by tagging with dimethylzinc (DMZ) via atomic layer deposition (ALD) and counting the resulting zinc atoms with high sensitivity-low energy ion scattering (HS-LEIS). A bare, clean native oxide - terminated silicon wafer has 3.66 OH/nm2, which agrees with density functional theory (DFT) calculations from the literature. After TDMAMS modification of native oxide-terminated silicon, the number of surface silanols decreases by a factor of ca. 10 (to 0.31 OH/nm2). Intermediate surface testing (IST) was used to characterize the surface activities of functionalized capillaries. It suggested a significant deactivation/passivation of the capillary with some surface silanols remaining; the modified capillary shows significant deactivation compared to the native/unmodified fused silica tubing. We believe that this methodology for determining the number of residual silanols on silanized fused silica will be enabling for chromatography.


Assuntos
Silanos , Silício , Capilares , Dióxido de Silício , Óxidos
4.
J Breath Res ; 17(4)2023 09 04.
Artigo em Inglês | MEDLINE | ID: mdl-37611565

RESUMO

Analyzing exhaled breath samples, especially using a highly sensitive method such as MCC/IMS (multi-capillary column/ion mobility spectrometry), may also detect analytes that are derived from exogenous production. In this regard, there is a discussion about the optimal interpretation of exhaled breath, either by considering volatile organic compounds (VOCs) only in exhaled breath or by additionally considering the composition of room air and calculating the alveolar gradients. However, there are no data on whether the composition and concentration of VOCs in room air are identical to those in truly inhaled air directly before analyzing the exhaled breath. The current study aimed to determine whether the VOCs in room air, which are usually used for the calculation of alveolar gradients, are identical to the VOCs in truly inhaled air. For the measurement of inhaled air and room air, two IMS, each coupled with an MCC that provided a pre-separation of the VOCs, were used in parallel. One device was used for sampling room air and the other for sampling inhaled air. Each device was coupled with a newly invented system that cleaned room air and provided a clean carrier gas, whereas formerly synthetic air had to be used as a carrier gas. In this pilot study, a healthy volunteer underwent three subsequent runs of sampling of inhaled air and simultaneous sampling and analysis of room air. Three of the selected 11 peaks (P4-unknown, P5-1-Butanol, and P9-Furan, 2-methyl-) had significantly higher intensities during inspiration than in room air, and four peaks (P1-1-Propanamine, N-(phenylmethylene), P2-2-Nonanone, P3-Benzene, 1,2,4-trimethyl-, and P11-Acetyl valeryl) had higher intensities in room air. Furthermore, four peaks (P6-Benzaldehyde, P7-Pentane, 2-methyl-, P8-Acetone, and P10-2-Propanamine) showed inconsistent differences in peak intensities between inhaled air and room air. To the best of our knowledge, this is the first study to compare simultaneous sampling of room air and inhaled air using MCC/IMS. The simultaneous measurement of inhaled air and room air showed that using room air for the calculation of alveolar gradients in breath analysis resulted in different alveolar gradient values than those obtained by measuring truly inhaled air.


Assuntos
Testes Respiratórios , Espectrometria de Mobilidade Iônica , Humanos , Projetos Piloto , 1-Butanol , Acetona
5.
J Chromatogr A ; 1702: 464100, 2023 Aug 02.
Artigo em Inglês | MEDLINE | ID: mdl-37263056

RESUMO

Herein, a chiral multishelled mesoporous carbon nanospheres (MCNs) with unique spiral multishelled hollow mesoporous chiral structure is synthesized; the MCNs can be used as stationary phases for high-resolution gas chromatography (GC) and have good separation capacity. The successful preparation of MCNs is verified by a variety of characterizations. In addition, the MCNs-coated capillary column shows excellent separation performance for n-alkanes, n-alcohols, aromatic compounds, and esters, and it has a faster analysis time than the HP-5 commercial capillary column. The chromatography separation performance for various isomers and racemates of the MCNs stationary phase was evaluated, and it showed good separation capability for amino acid derivatives. The MCNs-coated capillary column has been demonstrated to present good reproducibility and stability. In summary, all of the chromatography experiments in this work indicate that this new stationary phase of the MCNs has good application potential for GC capillary separation.


Assuntos
Carbono , Nanosferas , Reprodutibilidade dos Testes , Cromatografia Gasosa/métodos , Ésteres
6.
J Chromatogr A ; 1699: 464029, 2023 Jun 21.
Artigo em Inglês | MEDLINE | ID: mdl-37119710

RESUMO

A chiral metal-organic framework L-Histidine-Zeolitic imidazolate framework-67 (L-His-ZIF-67) was synthesized by the mixture of chiral organic ligand L-histidine and non-chiral organic ligand 2-methylimidazole directly, and to the author's knowledge, the chiral L-His-ZIF-67 coated capillary column we prepared has still not been reported to date in the field of capillary electrophoresis. This chiral metal-organic frameworks material was used as the chiral stationary phase for enantioseparation of drugs by open-tubular capillary electrochromatography. The separation conditions such as pH value, buffer concentration and proportion of organic modifier were optimized. Under optimal conditions, the established enantioseparation system achieved good separation effect, and the resolution of five chiral drugs: esmolol (7.93), nefopam (3.03), salbutamol (2.42), scopolamine (1.08) and sotalol (0.81). In addition, the chiral recognition mechanism of L-His-ZIF-67 was elucidated by a series of mechanism experiments, and the specific interaction force was preliminarily speculated.


Assuntos
Eletrocromatografia Capilar , Estruturas Metalorgânicas , Estruturas Metalorgânicas/química , Eletrocromatografia Capilar/métodos , Estereoisomerismo , Ligantes , Histidina
7.
J Chromatogr A ; 1693: 463895, 2023 Mar 29.
Artigo em Inglês | MEDLINE | ID: mdl-36857983

RESUMO

DNA methylation is one of the epigenetic modifications at the 5-carbon of cytosine to form 5-methyl-2'-deoxycytidine (5mdC). In mammalian cells, 5mdC can be transferred to 5-hydroxymethyl-2'-deoxycytidine (5hmdC) by ten-eleven translocation (TET), and 5hmdC is further oxidized to 5-formyl-2'-deoxycytidine (5fodC) and 5-carboxyl-2'-deoxycytidine (5cadC). In the present work, we developed a highly sensitive nano liquid chromatographic method for the determination of 5mC and 5hmC with zwitterionic monolithic capillary column. The conditions for the preparation of zwitterionic monolithic capillary column were systematically optimized. The monolithic capillary column displayed high column efficiency for nucleoside dA (190,000 plates/m) and allowed the baseline separation of 10 standard nucleosides in HILIC mode. The detection sensitivity was improved significantly by using the large volume injection combined with sample stacking onto the head of the column when sample was dissolved in high content organic solvent (ACN: H2O = 97:3). The limit of detection for 5mdC and 5hmdC were determined as 4 nM and 3 nM, respectively, and the corresponding limit of quantification were determined as 12 nM and 10 nM, respectively. Further, the zwitterionic monolithic capillary column can be easily utilized in nano-LC and mass spectrometry coupling for qualitative analysis of 5mdC, 5hmdC, 5fodC and 5cadC in real mouse brain sample. The whole genomic DNA methylation levels in mouse brain sample can be easily determined with UV detection.


Assuntos
5-Metilcitosina , DNA , Animais , Camundongos , Cromatografia Líquida/métodos , DNA/química , Espectrometria de Massas , Mamíferos
8.
J Sep Sci ; 46(8): e2201039, 2023 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-36750206

RESUMO

A chiral covalent organic framework was synthesized, characterized, and incorporated into organic polymer monolithic capillary columns to provide chiral stationary phases for enantioseparations. The prepared monolithic capillary columns were characterized by scanning electron microscopy and elemental analysis. To obtain better enantioseparations, the columns' preparation conditions, and enantioseparation conditions were optimized. Baseline resolutions of several chiral compounds were obtained with good reproducibility and stability. Furthermore, the mechanism of chiral recognition was investigated using molecular docking with AutoDock. Docking results showed that the enantioselectivity factor rather than resolution is correlated with the binding free energy difference between enantiomers with the chiral covalent organic framework. And abundant acetoxy and nitrile groups as well as benzene rings in the chiral covalent organic framework are responsible for the enantioseparation ability of the chiral monolithic capillary columns.

9.
J Chromatogr A ; 1675: 463150, 2022 Jul 19.
Artigo em Inglês | MEDLINE | ID: mdl-35660319

RESUMO

Hydrogen-bonded organic frameworks (HOFs) are two dimensional (2D) or three dimensional (3D) porous crystalline materials constructed by Hydrogen bond interaction. In recent years, a variety of functional HOF materials have been successfully synthesized and used in structural identification, environmental pollutant removal, chiral resolution, drug delivery, fluorescence sensing, etc. Here, we first reported that a HOF to coated capillary column for high-resolution gas chromatographic separation of a wide range of analytes, including n-alkanes, n-alcohols, polycyclic aromatic hydrocarbons, and positional isomers, especially for racemates, the HOFs column showed excellent separation repeatability and reproducibility. The relative standard deviation (RSD) values for the retention times were in the range of 0.37-2.43% for run to run (n = 3), 0.38-2.51% for day-to-day (n = 3), and 0.31-2.54% for column-to-column (n = 3), respectively. Moreover, we applied density-functional theory to calculate the adsorption of enantiomers in HOF structures. This work proved that the HOFs had great application prospects as stationary phase in gas chromatography.


Assuntos
Hidrogênio , Cromatografia Gasosa/métodos , Isomerismo , Reprodutibilidade dos Testes , Estereoisomerismo
10.
Anal Chim Acta ; 1201: 339615, 2022 Apr 08.
Artigo em Inglês | MEDLINE | ID: mdl-35300801

RESUMO

Insufficient chromatographic performance results in reduced utilization of MS/MS scan capacity of advanced MS instruments. Improvement in peptide separation in liquid chromatography is critical for increasing the sensitivity and quantification performance of LC-MS-based proteomics. However, existing column fabrication methods suffer from slow packing, large dead volume, and band broadening. Herein, we reported that directly pulling emitter tips within short frits after fast packing (termed "filled tip") can minimize the dead volume, improving ionization efficiency and reducing band broadening. Within 10 min, our method can pack over 10 cm for 50 µm I.D. capillary columns under 6-8 MPa and over 50 cm for 75 µm I.D. long capillary columns under 70 MPa. We can identify an average of 3043 protein groups and 33 309 peptide-spectrum matches (PSMs) from 1 ng of HeLa digest using a 50 µm I.D. x 20 cm "filled tip" column, with good reproducibility. The number of protein groups increased by 50% and 96% when compared with a 50 µm I.D. "void tip" column and a 100 µm I.D. column with a manually pulled tip, respectively. We identified an average of 5534 protein groups and 71 769 PSMs from 10 ng of HeLa digest. In addition, using 75 µm I.D. x 50 cm "filled tip" columns, we can identify on average 8829 protein groups and 170 751 PSMs in single-shot data-dependent acquisition analysis from 500 ng of 293T digested peptides. Importantly, good repeatability and reproducibility of "filled tip" method were verified by results from columns fabricated in three batches and by different persons. When compared with conventional columns with "void tips", "filled tip" columns reduced median full peak widths by 19% and alleviated sampling redundancy by 10%. Collectively, we developed an easy-to-use, versatile and robust column fabrication method for both narrow-bore and long capillary columns, which achieved great sensitivity and depth in proteomic analysis.


Assuntos
Proteômica , Espectrometria de Massas em Tandem , Cromatografia Líquida , Humanos , Peptídeos , Reprodutibilidade dos Testes
11.
J Chromatogr A ; 1668: 462880, 2022 Apr 12.
Artigo em Inglês | MEDLINE | ID: mdl-35220014

RESUMO

An ultra-long (5 m) open tubular capillary liquid chromatographic column was prepared by incorporating Metal Organic Framework (MOF), zeolitic imidazolate framework-8 (ZIF-8), directly into polymer coating, which was synthesized by the copolymerization of 4-vinylbenzyl chloride and divinylbenzene, on the capillary inner surface. The prepared ZIF-8 incorporate polymeric open tubular capillary column (denoted as ZIF-8-p(VBC/DVB) OTCC) was evaluated with thiourea, alkylbenzenes and polycyclic aromatic hydrocarbons as probe molecules. The results showed that the ultra-long column achieved absolute column efficiency of 130,000 plates for thiourea, and the incorporation of ZIF-8 effectively improved the chromatography performance of the OTCC. Baseline separation of aromatic compounds and position isomers was achieved based on multiple interactions provided by the zeolitic imidazolate framework and polymer, including hydrophobic interaction, π-π stacking interaction and the coordination effect. The RSD values (run-to-run, day-to-day, column-to-column, n = 3) of retention time of phenylenediamine isomers and propylbenzene isomers were less than 0.7%, 1.2% and 4.0% respectively, suggesting excellent repeatability. Finally, the prepared ZIF-8-p(VBC/DVB) OTCC was applied to the separation of hydroxyacetophenone isomers with satisfied results.


Assuntos
Eletrocromatografia Capilar , Zeolitas , Eletrocromatografia Capilar/métodos , Cromatografia Líquida , Polímeros/química , Porosidade , Zeolitas/química
12.
J Pharm Biomed Anal ; 209: 114513, 2022 Feb 05.
Artigo em Inglês | MEDLINE | ID: mdl-34883420

RESUMO

Two liposomes, including 1,2-distearoyl-sn-glycero-3-phosphocholine (DSPC) + 1,2-dimyristoyl-sn-glycero-3-phosphoethanolamine (PE) + cholesterol (Chol) (DSPC/PE/Chol liposomes) and soybean lecithin (SPC) + PE + Chol (SPC/PE/Chol liposomes), were prepared and fixed on the inner wall of capillary column by using the adhesion of polydopamine (PDA) membrane and the cross-linking property of glutaraldehyde (GA). The immobilized liposome capillary column (ILCC) has good repeatability and stability based on the electrophoretic mobility of analyte. A CE method based on the immobilized liposome capillary column chromatography (ILCCC) was successfully developed to study the retention behavior of drugs on ILCC, and the logarithm of retention factor (log k) of neutral and ionic drugs were determined. The results show that the log k measured by the ILCCC based on two liposomes have a good linear fitting (R2 = 0.86). Moreover, the linear relationship between ILCCC system and other related research systems (octanol-water system and immobilized artificial membrane (IAM)) was analyzed, and the results indicate that SPC/PE/Chol ILCCC, DSPC/PE/Chol ILCCC and IAM systems have good fitting results, R2 values are 0.86 and 0.78, respectively. In addition, the normalization coefficients of ILCCC and IAM systems obtained by the linear free energy relationship (LFER) analysis are close and the d value is small. In short, the ILCCC is a simple and feasible method for studying drug membrane permeability.


Assuntos
Lipossomos , Fosfatidiletanolaminas , Permeabilidade da Membrana Celular , Colesterol , Permeabilidade
13.
J Chromatogr A ; 1659: 462632, 2021 Dec 06.
Artigo em Inglês | MEDLINE | ID: mdl-34731756

RESUMO

Using a recent generalization of the Aris dispersion method, we have derived exact analytical expressions for the long-time limit dispersion in 2-D multi-capillary packings with diffusional bridging (binary channel system). Both the plug flow and the parabolic flow case are considered. The expressions are mathematically exact over the entire range of possible values of the degree of polydispersity (σ), the retention equilibrium constant K and the diffusion coefficients in the mobile and stationary zone. They are validated by comparing them to the dispersion data obtained by numerically solving the partial differential equation describing the general advection-diffusion mass balance. A correlation coefficient of R2 > 0.99995 is obtained. The form of the obtained analytical expression shows the dispersion arising from the polydispersity effect in multi-capillary systems can be split in two contributions, one related to the actual velocity difference between the adjacent channels and one related to the fact that the average of the intra-capillary C-term band broadening is larger in any σ≠0-case than in the σ=0-case. When leaving the small σ-assumption, a new factor ((1- σ2)/(1+3σ2)2) emerges, common to both the solution for the plug flow and the parabolic case. The analysis shows the parabolic flow not only leads to a larger intra-capillary dispersion (σ=0) than the plug flow case as known from literature but is also more sensitive to the polydispersity effect (up to some 10 to 20%).


Assuntos
Cromatografia , Cromatografia/métodos , Difusão
14.
Electrophoresis ; 42(20): 2081-2086, 2021 10.
Artigo em Inglês | MEDLINE | ID: mdl-34347304

RESUMO

An online method based on CE was established to screen α-glucosidase inhibitors from traditional Tibetan medicine extracts. First, the inner wall at the inlet of capillary column was simply and effectively functionalized by dopamine-polyethyleneimine co-deposition method, which combines the adhesion property of dopamine and easy cationization of polyethyleneimine. Then α-glucosidase was rapidly immobilized on the inner wall of the capillary column by electrostatic adsorption. The inter- and intraday repeatability of the peak area of the enzymatic reaction product (p-nitrophenol) in a capillary was evaluated, and RSD% (n = 3) was 0.94% and 1.09%, respectively. Good batch-to-batch reproducibility of the peak area between different capillaries (RSD = 2.1%, n = 5) shows that the preparation method has good reproducibility. The Michaelis-Menten constant of the immobilized α-glucosidase was measured to be 1.18 mM, and the capillary column enzyme reactor retained 85.9% of initial activity after 30 cycles. Finally, it was applied to the screening of enzyme inhibitors in 20 traditional Tibetan medicine extracts. Sixteen medicines with inhibitory activity were screened out, and Rheum australe had the strongest inhibitory effect with an inhibitory rate of 83.3 ± 0.4%. These results showed that this method is effective to find potential enzyme inhibitors.


Assuntos
Dopamina , Enzimas Imobilizadas , Inibidores de Glicosídeo Hidrolases , Polietilenoimina , alfa-Glucosidases , Capilares , Avaliação Pré-Clínica de Medicamentos , Inibidores de Glicosídeo Hidrolases/farmacologia , Extratos Vegetais , Reprodutibilidade dos Testes
15.
Electrophoresis ; 42(20): 2087-2093, 2021 10.
Artigo em Inglês | MEDLINE | ID: mdl-34411326

RESUMO

Open tubular CEC (OT-CEC) column with a very high separation efficiency was prepared for peptides separation. A pretreated silica-fused capillary was reacted with 3-(methacryloxy) propyltrimethoxysilane followed by vinylbenzyl chloride and divinylbenzene to produce first thin monolithic monolayer. The second copolymer layer was formed on thin monolithic monolayer of the capillary by reversible addition-fragmentation transfer polymerization of N-phenylacrylamide and styrene. The key parameters including buffer pH value and organic modifier were systematically evaluated to provide the optimal chromatographic condition. The resultant OT-CEC columns were validated by separating a synthetic mixture of peptides and cytochrome C tryptic digest in capillary electrochromatography. The number of theoretical plates as high as 2.4 million per column was achieved for synthetic mixture peptides. In addition, the fabricated OT-CEC column also resolved more than 18 high-efficiency digestion peptides from a mixture containing tryptic digest of cytochrome C. The column to column and inter- to intraday repeatabilities of OT-CEC column through RSD% were found better than 3.0%, exhibiting satisfactory stability and repeatability of the two-layer deposited OT-CEC column. The results reveal that the open tubular capillary column modified with two-layer copolymer shows the great prospect for the separation of proteins in capillary electrochromatography.


Assuntos
Eletrocromatografia Capilar , Peptídeos , Citocromos c , Peptídeos/isolamento & purificação , Polímeros , Proteínas
16.
Front Chem ; 9: 640336, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-34178939

RESUMO

Through the course of our bio-analytical chemistry studies, we developed a novel proteomics analysis method, FD-LC-MS/MS (fluorogenic derivatization-liquid chromatography-tandem mass spectrometry). This method consists of fluorogenic derivatization (FD), LC separation, and detection/quantification of the derivatized proteins, followed by isolation, tryptic digestion of the isolated proteins, and final identification of the isolated proteins using electrospray ionization nano-LC-MS/MS of the generated peptide mixtures with a probability-based protein identification algorithm. In this review, we will present various examples where this method has been used successfully to identify expressed proteins in individual human cells. FD-LC-MS/MS is also suitable for differential proteomics analysis. Here, two biological samples are treated by the same steps mentioned above, and the two chromatograms obtained are compared to identify peaks with different intensities (variation in protein levels). Associated peak fractions are then isolated, and the differentially expressed proteins between the two samples are identified by LC-MS/MS. Several biomarkers for cancers have been identified by FD-LC-MS/MS. For more efficient separation, nano-flow LC with a phenyl-bonded monolithic silica-based capillary column was adopted for cell-expressed intact protein analysis. The derivatized human cell proteins (K562) and yeast cell (Saccharomyces cerevisiae) proteins as model intact cell proteins were analyzed by nano-flow LC with fluorescence detection. More than 1,300 protein peaks were separated/detected from both cells. For straightforward comparison of multiple peak separation profiles, a novel type of chromatogram display, termed the "spiderweb" chromatogram, was developed. A nano-LC-FD-LC-mass spectrometry trial for molecular weight estimation of FD proteins has also been conducted.

17.
J Chromatogr A ; 1648: 462218, 2021 Jul 05.
Artigo em Inglês | MEDLINE | ID: mdl-33992996

RESUMO

Due to its unique structure, core-shell material has presented significantly improved chromatographic performance in comparison with conventional totally porous material. This has been well demonstrated in the analytical column format, e.g. 4.6 mm i.d. columns. In the proteomics field, there is always a demand for high resolution microseparation tools. In order to explore core-shell material's potential in proteomics-oriented microseparations, we investigated chromatographic performance of core-shell material in a nanoLC format, as well as its resolving power for protein digests. The results show core-shell nanoLC columns have similar van Deemter curves to the totally porous particle-packed nanoLC columns. For 100 µm i.d. capillary columns, the core-shell material does not have significantly better dynamics. However, both core-shell and totally porous particle-packed nanoLC columns have shown high efficiencies: plate heights of ~11 µm, equivalent to 90000 plates per meter, have been achieved with 5 µm particles. Using a 60 cm long core-shell nanoLC column, 72000 plates were realized in an isocratic separation of neutral compounds. For a 15 cm long nanoLC column, a maximum peak capacity of 220 has been achieved in a 5 hour gradient separation of protein digests, indicating the high resolving power of core-shell nanoLC columns. With a standard HeLa cell lysate as the sample, 2546 proteins were identified by using the core-shell nanoLC column, while 2916 proteins were identified by using the totally porous particle-packed nanoLC column. Comparing the two sets of proteomics data, it was found that 1830 proteins were identified by both columns, while 1086 and 716 proteins were uniquely identified by using totally porous and core-shell particle-packed nanoLC columns, respectively, suggesting their complementarity in nanoLC-MS based proteomics.


Assuntos
Cromatografia Líquida/métodos , Proteômica/métodos , Cromatografia Líquida de Alta Pressão/métodos , Células HeLa , Humanos , Tamanho da Partícula , Porosidade
18.
Mol Cell Proteomics ; 20: 100082, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-33887488

RESUMO

Reversed-phase HPLC is the most commonly applied peptide-separation technique in MS-based proteomics. Particle-packed capillary columns are predominantly used in nanoflow HPLC systems. Despite being the broadly applied standard for many years, capillary columns are still expensive and suffer from short lifetimes, particularly in combination with ultra-high-pressure chromatography systems. For this reason, and to achieve maximum performance, many laboratories produce their own in-house packed columns. This typically requires a considerable amount of time and trained personnel. Here, we present a new packing system for capillary columns enabling rapid, multiplexed column packing with pressures reaching up to 3000 bar. Requiring only a conventional gas pressure supply and methanol as the driving fluid, our system replaces the traditional setup of helium-pressured packing bombs. By using 10× multiplexing, we have reduced the production time to just under 2 min for several 50 cm columns with 1.9-µm particle size, speeding up the process of column production 40 to 800 times. We compare capillary columns with various inner diameters and lengths packed under different pressure conditions with our newly designed, broadly accessible high-pressure packing station.


Assuntos
Cromatografia Líquida de Alta Pressão/instrumentação , Proteômica/instrumentação , Ação Capilar , Cromatografia Líquida de Alta Pressão/métodos , Espectrometria de Massas/métodos , Pressão , Proteômica/métodos
19.
ACS Appl Mater Interfaces ; 13(14): 16812-16819, 2021 Apr 14.
Artigo em Inglês | MEDLINE | ID: mdl-33784465

RESUMO

Seeded crystal growths of nanostructures within confined spaces offer an interesting approach to design chemical reaction spaces with tailored inner surface properties. However, such crystal growth within confined spaces tends to be inherently difficult as the length increases as a result of confinement effects. Here, we demonstrate a space-confined seeded growth of ZnO nanowires within meter-long microtubes of 100 µm inner diameter with the aspect ratio of up to 10 000, which had been unattainable to previous methods of seeded crystal growths. ZnO nanowires could be grown via seeded hydrothermal crystal growth for relatively short microtubes below the length of 40 mm, while any ZnO nanostructures were not observable at all for longer microtubes above 60 mm with the aspect ratio of 600. Microstructural and mass spectrometric analysis revealed that a conventional seed layer formation using zinc acetate is unfeasible within the confined space of long microtubes as a result of the formation of detrimental residual Zn complex compounds. To overcome this space-confined issue, a flow-assisted seed layer formation is proposed. This flow-assisted method enables growth of spatially uniform ZnO nanowires via removing residual compounds even for 1 m long microtubes with the aspect ratio of up to 10 000. Finally, the applicably of ZnO-nanowire-decorated long microtubes for liquid-phase separations was demonstrated.

20.
J Chromatogr A ; 1638: 461818, 2021 Feb 08.
Artigo em Inglês | MEDLINE | ID: mdl-33516049

RESUMO

Modifications to the flow profile used in open tube capillary liquid chromatography (OT-CLC) include using slip-flow walls and using electroosmosis as a fluid pump as practiced in electrochromatography. These modifications are implemented experimentally by changing the capillary surface and solvent conditions which results in the change of boundary conditions at the capillary wall. In this paper we employ a theory-based study and compare the zone broadening of simple solutes using parabolic flow from a liquid pump, slip-flow from a highly hydrophobic inner surface with water eluent, and electroosmosis for the conditions of pure water and dilute salt utilizing 2 µm inner diameter OT capillaries. In general, the two types of flow other than parabolic exhibit thin zones in the early part of the chromatogram, consistent with previous studies of slip-flow and electroosmotic flow used in electrochromatography. Electrochromatography is shown to yield higher efficiency and less zone broadening than parabolic and slip-flow conditions used in this study. Nonetheless, it is found that the zone standard deviations are shown to be similar for these flow profiles as is the number of plates for these different flow profiles under the conditions utilized here. It is revealed that these modifications do not warrant the effort to maintain the special solvent conditions when compared to gradient elution OT-CLC, which gives a nearly constant peak width throughout the chromatogram, is easiest to implement, and is the method of choice for complex analysis.


Assuntos
Eletrocromatografia Capilar/instrumentação , Eletrocromatografia Capilar/métodos , Modelos Teóricos , Pressão , Reologia , Cromatografia Líquida , Eletro-Osmose , Soluções
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