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In the global processed seafood industry, disparate actors play different roles along the supply chain, creating multiple opportunities for mistakes, malpractice, and fraud. As a consequence, consumers may be exposed to non-authentic products, which hinder informed purchasing decisions and broader efforts to improve trade transparency and sustainability. Here, we characterised the taxonomic composition of 62 processed seafood products in Italian, British and Albanian retailers, purposefully obtained from different supply routes, using multiple DNA metabarcoding markers. By combining molecular results with metadata reported on labels, we revealed patterns of mislabelling in 24 products (39%) across sampling regions, denoting lack of transparency of processed seafood products based on resources sourced from either Europe or globally. We show that the accuracy of label claims and the mis-represented and underestimated levels of traded biodiversity are largely determined by the management of raw material by global processors. Our study shows that DNA metabarcoding is a powerful and novel authentication tool that is mature for application at different stages of the seafood supply chain to protect consumers and improve the sustainable management of fish stocks.
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Código de Barras de DNA Taxonômico , Rotulagem de Alimentos , Alimentos Marinhos , Animais , Europa (Continente) , Abastecimento de Alimentos , Biodiversidade , Humanos , PeixesRESUMO
Ecosystems and biodiversity across the world are being altered by human activities. Habitat modification and degradation are among the most important drivers of biodiversity loss. These modifications can have an impact on species behavior, which can, in turn, impact their mortality. While several studies have investigated the impacts of habitat degradation and fragmentation on terrestrial species, the extent to which habitat modifications affect the behavior and fitness of marine species is still largely unknown, particularly for pelagic species. Since the early 1990s, industrial purse seine vessels targeting tuna have started deploying artificial floating objects-Drifting Fish Aggregating Devices (DFADs)-in all oceans to increase tuna catchability. Since then, the massive deployment of DFADs has modified tuna surface habitat, by increasing the density of floating objects, with potential impacts on tuna associative behavior and mortality. In this study, we investigate these impacts for yellowfin tuna in the Indian Ocean. Using an individual-based model based on a correlated random walk and newly available data on DFAD densities, we quantify for the first time how the increase in floating object density, due to DFAD use, affects the percentage of time that yellowfin tuna spend associated, which, in turn, directly impacts their availability to fishers and fishing mortality. This modification of tuna associative behavior could also have indirect impacts on their fitness, by retaining tuna in areas detrimental to them or disrupting schooling behavior. Hence, there is an urgent need to further investigate DFAD impacts on tuna behavior, in particular, taking social behavior into account, and to continue regulation efforts on DFAD use and monitoring.
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Fish ear bones, known as otoliths, are often collected in fisheries to assist in management, and are a common sample type in museum and national archives. Beyond their utility for ageing, morphological and trace element analysis, otoliths are a repository of valuable genomic information. Previous work has shown that DNA can be extracted from the trace quantities of tissue remaining on the surface of otoliths, despite the fact that they are often stored dry at room temperature. However, much of this work has used reduced representation sequencing methods in clean lab conditions, to achieve adequate yields of DNA, libraries and ultimately single-nucleotide polymorphisms (SNPs). Here, we pioneer the use of small-scale (spike-in) sequencing to screen contemporary otolith samples prepared in regular molecular biology (in contrast to clean) laboratories for contamination and quality levels, submitting for whole-genome resequencing only samples above a defined endogenous DNA threshold. Despite the typically low quality and quantity of DNA extracted from otoliths, we are able to produce whole-genome libraries and ultimately sets of filtered, unlinked and even putatively adaptive SNPs of ample numbers for downstream uses in population, climate and conservation genomics. By comparing with a set of tissue samples from the same species, we are able to highlight the quality and efficacy of otolith samples from DNA extraction and library preparation, to bioinformatic preprocessing and SNP calling. We provide detailed schematics, protocols and scripts of our approach, such that it can be adopted widely by the community, improving the use of otoliths as a source of valuable genomic data.
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Understanding the magnitude of biosecurity risks in aquatic environments is increasingly complex and urgent because increasing volumes of international shipping, rising demand for aquaculture products, and growth in the global aquarium trade, are accelerating invasive alien species spread worldwide. These threats are especially pressing amid climate and biodiversity crises. However, global and national biosecurity systems are poorly prepared to respond because of fragmented research and policy environments, that often fail to account for risks across sectors or across stakeholder needs and fail to recognize similarities in the processes underpinning biological invasions. In the present article, we illustrate the complex network of links between biosecurity threats across human, animal, plant, and environment sectors and propose a universal approach to risk assessment. One Biosecurity is a holistic, interdisciplinary approach that minimizes biosecurity risks across human, animal, plant, algal, and ecosystem health and is critical to reduce redundancy and increase cross-sectoral cohesion to improve policy, management, and research in aquatic biosecurity.
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The Gulf of Maine (GoM) is one of the fastest-warming parts of the world's oceans. Some species' distributional shifts have already been documented, especially for commercially-important species. Less is known about species that are not currently exploited but may become so in the future. As a case study into these issues, we focus on lumpfish (Cyclopterus lumpus) because of the recognized and timely need to understand wild lumpfish population dynamics to support sustainable fisheries and aquaculture developments. Using occurrence data from five different fisheries-dependent and independent surveys, we examined lumpfish distribution over time in the GoM. We found that lumpfish presence was more likely in Fall and correlated with deeper waters and colder bottom temperatures. Since 1980, lumpfish presence has increased over time and shifted north. Given a limited set of data, these findings should be interpreted with caution as additional work is needed to assess if the actual distribution of lumpfish is changing. Nevertheless, our work provides preliminary information for resource managers to ensure that lumpfish are harvested sustainably for use in emergent lumpfish aquaculture facilities.
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Pesqueiros , Animais , Maine , Dinâmica Populacional , Perciformes , Peixes , Distribuição AnimalRESUMO
The application of antimicrobials in aquaculture primarily aims to prevent and treat bacterial infections in fish, but their inappropriate use may result in the emergence of zoonotic antibiotic-resistant bacteria and the subsequent transmission of resistant strains to humans via food consumption. The aquatic environment serves as a potential reservoir for resistant bacteria, providing an ideal breeding ground for development of antimicrobial resistance (AMR). The mutual inter-connection of intensive fish-farming systems with terrestrial environments, the food processing industry and human population creates pathways for the transmission of resistant bacteria, exacerbating the problem further. The aim of this study was to provide an overview of the most effective and available risk mitigation strategies to tackle AMR in aquaculture, based on the One Health (OH) concept. The stringent antimicrobial use guidelines, promoting disease control methods like enhanced farm biosecurity measures and vaccinations, alternatives to antibiotics (ABs) (prebiotics, probiotics, immunostimulants, essential oils (EOs), peptides and phage therapy), feeding practices, genetics, monitoring water quality, and improving wastewater treatment, rather than applying excessive use of antimicrobials, can effectively prevent the development of AMR and release of resistant bacteria into the environment and food. The contribution of the environment to AMR development traditionally receives less attention, and, therefore, environmental aspects should be included more prominently in OH efforts to predict, detect and prevent the risks to health. This is of particular importance for low and middle-income countries with a lack of integration of the national AMR action plans (NAPs) with the aquaculture-producing environment. Integrated control of AMR in fisheries based on the OH approach can contribute to substantial decrease in resistance, and such is the case in Asia, where in aquaculture, the percentage of antimicrobial compounds with resistance exceeding 50% (P50) decreased from 52% to 22% within the period of the previous two decades.
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Social sustainability in fisheries focuses on retaining or improving societal welfare in the fishery system without threatening its long-term financial benefits and socio-cultural welfare. However, often social sustainability issues are ignored while implementing any fisheries management actions rather than only focusing on economic and environmental sustainability issues. This study assesses the social sustainability in Bangladesh marine fisheries management gaining insights from the coastal and marine fisheries-dependent communities of Hatiya Upazila in 2021-2022 using a mixed method approach especially focusing on the social issues during the marine fishing ban. Results have shown positive effects on fish production but negative implications on the socio-economic circumstances of the reliant households after the implementation of the marine fishing ban. During the ban, the ability of around 33 % of fisher households to have 3 meals a day has drastically reduced to 2 or 1 meal per day. Households' average fish intake has reduced from 7 kg to 4 kg per week during the ban. Similarly, there have been detrimental effects on family relationships, healthcare access and children's education during the ban. Moreover, pregnant women and children have suffered greatly from protein deficiencies as fishers could not buy protein-rich foods for their families during the ban. Due to the shortage of alternate income-generating activities (AIGAs), almost 71 % of fishers became indebted during the ban. To assist the fishers during the ban, the government has implemented several measures, such as offering incentives (40 kg of rice per registered fisherman per month) and/or AIGA but those are too scant to recompense for the loss that is incurred due to the fishing ban. Finally, this study provides some way forward to bring social sustainability that is affected due to the marine fishing ban as well as to partly meet the targets of Sustainable Development Goals 1, 2, 14 and 15.
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Overfishing not only drastically reduces the number of fish in an exploited population but is also often selective for body size by removing the largest individuals from a population. Here, we study experimentally the evolutionary effects of size-selective harvesting using whole-genome sequencing on a model organism, the zebrafish (Danio rerio). We demonstrate genomic shifts in the populations exposed to size-selective harvesting for five generations and show reduced genetic diversity in all harvested lines, including the control line (non-size-selected). We also determine differences in groups of genes related to certain gene ontology annotations between size-selectively harvested lines, with enrichment in nervous system related genes in the large-selected lines. Our results illuminate the biological processes underlying fisheries-induced genetic changes and hence contribute toward the understanding of the changes potentially associated with the vulnerability of an exploited population to future stressors.
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Coastal and marine ecosystems supply multiple Ecosystem Services (ES). Nevertheless, these ecosystems are among the most impacted by human activities, harming the ES sustainable supply. Since ES are a spatial phenomenon, mapping can contribute to understand ES supply. For this, we use quantitative spatio-temporal frameworks to map and assess the supply of one provisioning (food from fisheries) and two regulating ES (nursery habitats and nutrient regulation), considering two periods: Baltic Sea Holistic Assessment (HOLAS) 2 (2011-2016) and 3 (2016-2021). The ES supply was assessed following a process-based modelling approach, using bio-physical indicators as proxies. The three ES models were applied and validated, showing moderate results. For fisheries and nursery ES the results showed a significantly higher supply in HOLAS 3 than in 2, and for nutrient ES the opposite. This indicates that the assessed ES changed due to environmental activities. The Anselin Local Moran's results showed that most ES index values aggregate in the High-High cluster; Moran's I and semi-variogram results showed a clustered pattern; and the Getis Ord* analysis showed that hot and cold spots corresponded to high and low supply areas. For fisheries, high ES supply areas were located in the central-southern part of the Baltic Sea, while low-supply regions were located in the northern part. For nursery ES, high supply areas were located in the southwestern Finnish and western Estonian coasts. For nutrient ES, high supply areas occurred in the central- and eastern-southern parts close to the coast. Correlations showed a statistically significant negative correlation between fisheries and nursery ES and a significant positive correlation between fisheries and nutrient ES. No statistically significant correlations were observed between nursery and nutrient ES supply. The results obtained are essential to support coastal and marine management and planning in the Baltic Sea as well as international environmental policies and directives.
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Ecossistema , Monitoramento Ambiental , Pesqueiros , Oceanos e Mares , Monitoramento Ambiental/métodos , Pesqueiros/estatística & dados numéricos , Conservação dos Recursos Naturais/métodos , Países BálticosRESUMO
Fish experiencing harvest mortality often evolve a fast life-history that prioritizes investment in current versus future reproduction, thereby potentially limiting energetic investment in the brain. Fisheries may also select for shy fish that are less willing to learn, or directly select fish with poor cognitive ability. The resulting evolutionary changes can alter the cognitive performance of individuals and affect fish populations and fisheries quality.
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Evolução Biológica , Cognição , Pesqueiros , Peixes , Animais , Peixes/fisiologia , MortalidadeRESUMO
Even before genome sequencing, genetic resources have supported species management and breeding programs. Current technologies, such as long-read sequencing, resolve complex genomic regions, like those rich in repeats or high in GC content. Improved genome contiguity enhances accuracy in identifying structural variants (SVs) and transposable elements (TEs). We present an improved genome assembly and SV catalogue for the Australasian snapper (Chrysophrys auratus). The new assembly is more contiguous, allowing for putative identification of 14 centromeres and transfer of 26,115 gene annotations from yellowfin seabream. Compared to the previous assembly, 35,000 additional SVs, including larger and more complex rearrangements, were annotated. SVs and TEs exhibit a distribution pattern skewed towards chromosome ends, likely influenced by recombination. Some SVs overlap with growth-related genes, underscoring their significance. This upgraded genome serves as a foundation for studying natural and artificial selection, offers a reference for related species, and sheds light on genome dynamics shaped by evolution.
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Pesqueiros , Peixes , Caça , Política , Animais , Oceano Atlântico , Conservação dos Recursos Naturais/legislação & jurisprudência , Conservação dos Recursos Naturais/tendências , Europa (Continente) , Pesqueiros/economia , Pesqueiros/legislação & jurisprudência , Caça/economia , Caça/legislação & jurisprudênciaRESUMO
In recent studies, artificial intelligence and machine learning methods give higher accuracy than other prediction methods in large data sets with complex structures. Instead of statistical methods, artificial intelligence, and machine learning are used due to the difficulty of constructing mathematical models in multi-parameter and multivariate problems. In this study, predictions of length-weight relationships and meat productivity were generated by machine learning models using measurement data of male and female crayfish in the narrow-clawed crayfish population living in Apolyont Lake. The data set was created using the growth performance and morphometric characters from 1416 crayfish in different years to determine the length-weight relationship and length-meat yield. Statistical methods, artificial intelligence, and machine learning are used due to the difficulty of constructing mathematical models in multi-parameter and multivariate problems. The analysis results show that most models designed as an alternative to traditional estimation methods in future planning studies in sustainable fisheries, aquaculture, and natural sources management are valid for machine learning and artificial intelligence. Seven different machine learning algorithms were applied to the data set and the length-weight relationships and length-meat yields were evaluated for both male and female individuals. Support vector regression (SVR) has achieved the best prediction performance accuracy with 0.996 and 0.992 values for the length-weight of males and females, with 0.996 and 0.995 values for the length-meat yield of males and females. The results showed that the SVR outperforms the others for all scenarios regarding the accuracy, sensitivity, and specificity metrics.
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Astacoidea , Aprendizado de Máquina , Animais , Astacoidea/anatomia & histologia , Astacoidea/crescimento & desenvolvimento , Masculino , Feminino , Carne , Aquicultura/métodos , Inteligência ArtificialRESUMO
The Anthropocene is seeing the human footprint rapidly spreading to all of Earth's ecosystems. The fast-changing biotic and abiotic conditions experienced by all organisms are exerting new and strong selective pressures, and there is a growing list of examples of human-induced evolution in response to anthropogenic impacts. No organism is exempt from these novel selective pressures. Here, we synthesise current knowledge on human-induced evolution in eukaryotic parasites of animals, and present a multidisciplinary framework for its study and monitoring. Parasites generally have short generation times and huge fecundity, features that predispose them for rapid evolution. We begin by reviewing evidence that parasites often have substantial standing genetic variation, and examples of their rapid evolution both under conditions of livestock production and in serial passage experiments. We then present a two-step conceptual overview of the causal chain linking anthropogenic impacts to parasite evolution. First, we review the major anthropogenic factors impacting parasites, and identify the selective pressures they exert on parasites through increased mortality of either infective stages or adult parasites, or through changes in host density, quality or immunity. Second, we discuss what new phenotypic traits are likely to be favoured by the new selective pressures resulting from altered parasite mortality or host changes; we focus mostly on parasite virulence and basic life-history traits, as these most directly influence the transmission success of parasites and the pathology they induce. To illustrate the kinds of evolutionary changes in parasites anticipated in the Anthropocene, we present a few scenarios, either already documented or hypothetical but plausible, involving parasite taxa in livestock, aquaculture and natural systems. Finally, we offer several approaches for investigations and real-time monitoring of rapid, human-induced evolution in parasites, ranging from controlled experiments to the use of state-of-the-art genomic tools. The implications of fast-evolving parasites in the Anthropocene for disease emergence and the dynamics of infections in domestic animals and wildlife are concerning. Broader recognition that it is not only the conditions for parasite transmission that are changing, but the parasites themselves, is needed to meet better the challenges ahead.
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Balancing blue growth with the conservation of wild species and habitats is a key challenge for global ocean management. This is exacerbated in Global South nations, such as Tanzania, where climate-driven ocean change requires delicate marine spatial planning (MSP) trade-offs to ensure climate resilience of marine resources relied upon by coastal communities. Here, we identified challenges and opportunities that climate change presents to the near-term spatial management of Tanzania's artisanal fishing sector, marine protected areas and seaweed farming. Specifically, spatial meta-analysis of climate modelling for the region was carried out to estimate the natural distribution of climate resilience in the marine resources that support these socially important sectors. We estimated changes within the next 20 and 40 years, using modelling projections forced under global emissions trajectories, as well as a wealth of GIS and habitat suitability data derived from globally distributed programmes. Multi-decadal analyses indicated that long-term climate change trends and extreme weather present important challenges to the activity of these sectors, locally and regionally. Only in few instances did we identify areas exhibiting climate resilience and opportunities for sectoral expansion. Including these climate change refugia and bright spots in effective ocean management strategies may serve as nature-based solutions: promoting adaptive capacity in some of Tanzania's most vulnerable economic sectors; creating wage-gaining opportunities that promote gender parity; and delivering some economic benefits of a thriving ocean where possible. Without curbs in global emissions, however, a bleak future may emerge for globally valuable biodiversity hosted in Tanzania, and for its coastal communities, despite the expansion of protected areas or curbs in other pressures. Growing a sustainable ocean economy in this part of the Global South remains a substantial challenge without global decarbonization.
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Fisheries have garnered attention from researchers throughout the last several decades. This sector's contribution has been recognised globally, leading to exponential growth in the number of research studies published in this area. Among all the dimensions from which this field has been explored, a critical theme under focus has been the drivers in the fisheries domain. Therefore, this study aims to provide a wholesome view of such studies that have explored drivers in the context of fisheries using bibliometric analysis and text-mining tools. Based on the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) approach, 322 studies on the theme were extracted from the Scopus and Web of Science databases. The studies extracted were analysed using VOSviewer and Orange software. The analysis uncovered the top journals and publishers in this domain and revealed the hidden patterns in the existing literature. The researchers posit that rather than judging the growth solely based on the number of citations and publications over the period, focus should be concentrated towards identifying themes that have gained immense attention from researchers over the years. The results indicate a shifting trend in recent times, centered on topics related to sustainability and climate change, among many more. The findings have important implications for researchers to make valuable contributions in this domain.
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Obtaining reliable estimates of the effective number of breeders (N b) and generational effective population size (N e) for fishery-important species is challenging because they are often iteroparous and highly abundant, which can lead to bias and imprecision. However, recent advances in understanding of these parameters, as well as the development of bias correction methods, have improved the capacity to generate reliable estimates. We utilized samples of both single-cohort young of the year and mixed-age adults from two geographically and genetically isolated stocks of the Australasian snapper (Chrysophrys auratus) to investigate the feasibility of generating reliable N b and N e estimates for a fishery species. Snapper is an abundant, iteroparous broadcast spawning teleost that is heavily exploited by recreational and commercial fisheries. Employing neutral genome-wide SNPs and the linkage-disequilibrium method, we determined that the most reliable N b and N e estimates could be derived by genotyping at least 200 individuals from a single cohort. Although our estimates made from the mixed-age adult samples were generally lower and less precise than those based on a single cohort, they still proved useful for understanding relative differences in genetic effective size between stocks. The correction formulas applied to adjust for biases due to physical linkage of loci and age structure resulted in substantial upward modifications of our estimates, demonstrating the importance of applying these bias corrections. Our findings provide important guidelines for estimating N b and N e for iteroparous species with large populations. This work also highlights the utility of samples originally collected for stock structure and stock assessment work for investigating genetic effective size in fishery-important species.
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The ability to strengthen governance institutions and fisheries restrictions and laws is needed to improve conservation and management of common-pool resources. We evaluated the potential for stimulating change with modest interventions by studying fishing village households before and after a 27-month intervention period in a high-priority coral reef conservation area. Interventions included training in catch monitoring, stock assessment, mapping fishing grounds, microcredit, gender inclusion, theatrical skills, fuel efficient stoves, and participation in the planning of a conservation proposal. There was a background increase in reported formal education, household size, group membership, and household wealth but a decrease in fish consumption and public services. Of conservation importance, the perceived strength of 13 governance institutions and benefits of 6 fisheries restrictions increased over the intervention period. Finally, correspondence between knowledge of and agreement with recent national fisheries laws was moderate to high and positively correlated. The intervention period was stronger than demographic factors that often influence perceptions, such as village, government services, gender, household size, membership in community groups, and age responses. In general, perceptions of strengths of governance and benefits of restrictions increased more among women and youth than adult men respondents. The largest changes in perceptions of increased benefits were among strict restrictions initially ranked low, specifically fisheries closures, parks, and species restrictions. Consequently, capacity building overrode demographic factors common to poor people with limited employment capacity that can have negative perceptions of strict conservation.
Variabilidad demográfica y escalas de aceptación y rechazo sobre las restricciones en el manejo de recursos Resumen Se necesita de la capacidad para fortalecer a las instituciones de gobierno y las leyes y restricciones a la pesca para mejorar la conservación y manejo de los recursos comunes. Evaluamos el potencial para estimular el cambio con intervenciones modestas con un estudio en los hogares de una aldea pesquera antes y después de un periodo de intervención de 27 meses en un área de conservación de gran prioridad para un arrecife de coral. Las intervenciones incluyeron formación en el monitoreo de las capturas, análisis de stock, mapeo de las zonas de pesca, microcréditos, inclusión de género, habilidades teatrales, estufas ecológicas y participación en la planeación de una propuesta de conservación. Hubo un incremento en el trasfondo de la educación formal reportada, el tamaño del hogar, los miembros del grupo y la riqueza del hogar, pero una disminución en el consumo de pescado y en el servicio público. Fue de importancia para la conservación que la fuerza percibida de 13 de las instituciones de gobierno y los beneficios de seis restricciones a la pesquería incrementaron durante el periodo de intervención. Por último, la correspondencia entre el conocimiento sobre y la aceptación de las leyes recientes de pesca fue de moderada a alta y con una correlación positiva. El periodo de intervención fue más fuerte que los factores demográficos que con frecuencia influyen sobre las percepciones, como las respuestas de los servicios de gobierno, aldea, género, tamaño del hogar, membresía en un grupo comunitario y edad. En general, la percepción de la fuerza de la gobernanza y los beneficios de las restricciones incrementó más entre las mujeres y la juventud que entre los hombres respondientes. Los cambios más grandes en la percepción del aumento en beneficios fueron entre las restricciones estrictas marcadas como bajas al inicio, específicamente el cierre de pesquerías, parques y restricción de especies. Como consecuencia, la formación de capacidad sobrepasó los factores demográficos, que con frecuencia son personas con una capacidad limitada de empleo que pueden tener una percepción negativa de la conservación estricta.
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The deliberate release of captive-bred individuals, the accidental escape of domesticated strains, or the invasion of closely related conspecifics into wild populations can all lead to introgressive hybridization, which poses a challenge for conservation and wildlife management. Rates of introgression and the magnitude of associated demographic impacts vary widely across ecological contexts. However, the reasons for this variation remain poorly understood. One rarely considered phenomenon in this context is soft selection, wherein relative trait values determine success in intraspecific competition for a limiting resource. Here we develop an eco-genetic model explicitly focussed on understanding the influence of such competitive interactions on the eco-evolutionary dynamics of wild populations experiencing an influx of foreign/domesticated individuals. The model is applicable to any taxon that experiences natural or human-mediated inputs of locally maladapted genotypes ('intrusion'), in addition to phenotype-dependent competition for a limiting resource (e.g. breeding sites, feeding territories). The effects of both acute and chronic intrusion depended strongly on the relative competitiveness of intruders versus locals. When intruders were competitively inferior, density-dependent regulation limited their reproductive success (ability to compete for limited spawning sites), which prevented strong introgression or population declines from occurring. In contrast, when intruders were competitively superior, this amplified introgression and led to increased maladaptation of the admixed population. This had negative consequences for population size and population viability. The results were sensitive to the intrusion level, the magnitude of reproductive excess, trait heritability and the extent to which intruders were maladapted relative to locals. Our findings draw attention to under-appreciated interactions between phenotype-dependent competitive interactions and maladaptive hybridization, which may be critical to determining the impact captive breeding programmes and domesticated escapees can have on otherwise self-sustaining wild populations.
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The effects of pelagic trawling on the health and welfare of Atlantic herring (Clupea harengus L.) were investigated on a refrigerated seawater vessel operating in the North Sea. A total of 495 Atlantic herring (Clupea harengus L.) were sampled during five hauls from two fishing trips in September 2021 and 2022. For assessments of consciousness and mortality, a Reflex Action Mortality Predictor test (i.e. RAMP-test) was used on herring collected following trawling and pumping. Inspections for external and internal damage or wounds were performed via morphological welfare indicators and analyses of photos and radiographs. In addition, blood samples were taken and analysed for haematological indicators of stress. Following trawling and pumping, only 5% of the investigated herring showed signs of external wounds associated with the morphological indicators of welfare, and no internal damage was observed in the radiographic inspections. However, 96% of the assessed herring scored 0 on all three reflexes included in the RAMP-test and were therefore judged dead. On average, herring lost 95% of their scales, while 95% of herring had a very high degree of ruptured red blood cells (i.e. haemolysis). Extensive scale loss results in a deterioration of the skin's protective barrier function, which in turn impairs the osmoregulatory capacity of the herring. This was evident by elevated levels of plasma osmolality and circulating chloride concentrations, which could also likely explain the high occurrence of haemolysis in captured herring. Extended trawling time and larger catch size proved to be two important factors to consider, as the former led to increased plasma levels of osmolality, whereas the latter was associated with elevated plasma levels of lactate and cortisol. In conclusion, the high mortality appears to be influenced by a combination of factors such as severe stress, loss of osmoregulatory ability, crowding density within the trawl, and extended trawling times. This study provides important information on the welfare of wild Atlantic herring caught using pelagic trawls and highlights areas where improvements can be made to safeguard the welfare of fish captured in pelagic fisheries in the future.