Mapping particulate organic carbon in lakes across China using OLCI/Sentinel-3 imagery.

Remote sensing monitoring of particulate organic carbon (POC) concentration is essential for understanding phytoplankton productivity, carbon storage, and water quality in global lakes. Some algorithms have been proposed, but only for regional eutrophic lakes. Based on in-situ data (N = 1269) in 49 lakes across China, we developed a blended POC algorithm by distinguishing Type-I and Type-II waters. Compared to Type-I, Type-II waters had higher reflectance peak around 560 nm (>0.0125 sr-1) and mean POC (4.65 ± 4.11 vs. 2.66 ± 3.37 mg/L). Furthermore, because POC was highly related to algal production (r = 0.85), a three-band index (R2 = 0.65) and the phytoplankton fluorescence peak height (R2 = 0.63) were adopted to estimate POC in Type-I and Type-II waters, respectively. The novel algorithm got a mean absolute percent difference (MAPD) of 35.93 % and outperformed three state-of-the-art formulas with MAPD values of 40.56-76.42 %. Then, the novel algorithm was applied to OLCI/Sentinel-3 imagery, and we first obtained a national map of POC in 450 Chinese lakes (> 20 km2), which presented an apparent spatial pattern of "low in the west and high in the east". In brief, water classification should be considered when remotely monitoring lake POC concentration over a large area. Moreover, a process-oriented method is required when calculating water column POC storage from satellite-derived POC concentrations in type-II waters. Our results contribute substantially to advancing the dynamic observation of the lake carbon cycle using satellite data.

Remote estimation of phycocyanin concentration in inland waters based on optical classification.

In recent years, under the dual pressure of climate change and human activities, the cyanobacteria blooms in inland waters have become a threat to global aquatic ecosystems and the environment. Phycocyanin (PC), a diagnostic pigment of cyanobacteria, plays an essential role in the detection and early warning of cyanobacterial blooms. In this context, accurate estimation of PC concentration in turbid waters by remote sensing is challenging due to optical complexity and weak optical signal. In this study, we collected a comprehensive dataset of 640 pairs of in situ measured pigment concentration and the Ocean and Land Color Instrument (OLCI) reflectance from 25 lakes and reservoirs in China during 2020-2022. We then developed a framework consisting of the water optical classification algorithm and three candidate algorithms: baseline height, band ratio, and three-band algorithm. The optical classification method used remote sensing reflectance (Rrs) baseline height in three bands: Rrs(560), Rrs(647) and Rrs(709) to classify the samples into five types, each with a specific spectral shape and water quality character. The improvement of PC estimation accuracy for optically classified waters was shown by comparison with unclassified waters with RMSE = 72.6 µg L-1, MAPE = 80.4 %, especially for the samples with low PC concentration. The results show that the band ratio algorithm has a strong universality, which is suitable for medium turbid and clean water. In addition, the three-band algorithm is only suitable for medium turbid water, and the line height algorithm is only suitable for high PC content water. Furthermore, the five distinguished types with significant differences in the value of the PC/Chla ratio well indicated the risk rank assessment of cyanobacteria. In conclusion, the proposed framework in this paper solved the problem of PC estimation accuracy problem in optically complex waters and provided a new strategy for water quality inversion in inland waters.

Floating Debris in the Northern Gulf of Mexico after Hurricane Katrina.

Hurricane Katrina (category 5 with maximum wind of 280 km/h when the eye is in the central Gulf of Mexico) made landfall near New Orleans on August 29, 2005, causing millions of cubic meters of disaster debris, severe flooding, and US$125 billion in damage. Yet, despite numerous reports on its environmental and economic impacts, little is known about how much debris has entered the marine environment. Here, using satellite images (MODIS, MERIS, and Landsat), airborne photographs, and imaging spectroscopy, we show the distribution, possible types, and amount of Katrina-induced debris in the northern Gulf of Mexico. Satellite images collected between August 30 and September 19 show elongated image features around the Mississippi River Delta in a region bounded by 92.5°W-87.5°W and 27.8°N-30.25°N. Image spectroscopy and color appearance of these image features indicate that they are likely dominated by driftwood (including construction lumber) and dead plants (e.g., uprooted marsh) and possibly mixed with plastics and other materials. The image sequence shows that if aggregated together to completely cover the water surface, the maximal debris area reached 21.7 km2 on August 31 to the east of the delta, which drifted to the west following the ocean currents. When measured by area in satellite images, this perhaps represents a historical record of all previously reported floating debris due to natural disasters such as hurricanes, floodings, and tsunamis.

Co-occurrence patterns and environmental factors associated with rapid onset of Microcystis aeruginosa bloom in a tropical coastal lagoon.

The environmental factors contributing to the Microcystis aeruginosa bloom (hereafter referred to as Microcystis bloom) are still debatable as they vary with season and geographic settings. We examined the environmental factors that triggered Microcystis bloom outbreak in India's largest brackish water coastal lagoon, Chilika. The warmer water temperature (25.31-32.48 °C), higher dissolved inorganic nitrogen (DIN) loading (10.15-13.53 µmol L-1), strong P-limitation (N:P ratio 138.47-246.86), higher water transparency (46.62-73.38 cm), and low-salinity (5.45-9.15) exerted a strong positive influence on blooming process. During the bloom outbreak, M. aeruginosa proliferated, replaced diatoms, and constituted 70-88% of the total phytoplankton population. The abundances of M. aeruginosa increased from 0.89 × 104 cells L-1 in September to 1.85 × 104 cells L-1 in November and reduced drastically during bloom collapse (6.22 × 103 cells L-1) by the late November of year 2017. The decrease in M. aeruginosa during bloom collapse was associated with a decline in DIN loading (2.97 µmol L-1) and N:P ratio (73.95). Sentinel-3 OLCI-based satellite monitoring corroborated the field observations showing Cyanophyta Index (CI) > 0.01 in September, indicative of intense bloom and CI < 0.0001 during late November, suggesting bloom collapse. The presence of M. aeruginosa altered the phytoplankton community composition. Furthermore, co-occurrence network indicated that bloom resulted in a less stable community with low diversity, inter-connectedness, and prominence of a negative association between phytoplankton taxa. Variance partitioning analysis revealed that TSM (16.63%), salinity (6.99%), DIN (5.21%), and transparency (5.15%) were the most influential environmental factors controlling the phytoplankton composition. This study provides new insight into the phytoplankton co-occurrences and combination of environmental factors triggering the rapid onset of Microcystis bloom and influencing the phytoplankton composition dynamics of a large coastal lagoon. These findings would be valuable for future bloom forecast modeling and aid in the management of the lagoon.

A hybrid remote sensing approach for estimating chemical oxygen demand concentration in optically complex waters: A case study in inland lake waters in eastern China.

Chemical oxygen demand concentration (CCOD) is widely used to indicate the degree of organic pollution of lakes, reservoirs and rivers. Mastering the spatiotemporal distribution of CCOD is imperative for understanding the variation mechanism and controlling of organic pollution in water. In this study, a hybrid approach suitable for Sentinel 3A/Ocean and Land Colour Instrument (OLCI) data was developed to estimate CCOD in inland optically complex waters embedding the interaction between CCOD and the absorption coefficients of optically active constituents (OACs). Based on in-situ sampling in different waters, the independent validations of the proposed model performed satisfactorily in Lake Taihu (MAPE = 23.52 %, RMSE = 0.95 mg/L, and R2 = 0.81), Lake Qiandaohu (MAPE = 21.63 %, RMSE = 0.50 mg/L and R2 = 0.69), and Yangtze River (MAPE = 29.34 %, RMSE = 0.83 mg/L, and R2 = 0.64). In addition, the approach not only showed significant superiority compared with previous algorithms, but also was suitable for other common satellite sensors equipped same or similar bands. The hybrid approach was applied to OLCI images to retrieve CCOD of Lake Taihu from 2016 to 2020 and reveals substantial interannual and seasonal variations. The above results indicate that the proposed approach is effective and stable for studying spatiotemporal dynamic of CCOD in optically complex waters, and that satellite-derived products can provide reliable information for lake water quality management.

Comparison of iCOR and Rayleigh atmospheric correction methods on Sentinel-3 OLCI images for a shallow eutrophic reservoir.

Remote sensing of inland waters is challenging, but also important, due to the need to monitor the ever-increasing harmful algal blooms (HABs), which have serious effects on water quality. The Ocean and Land Color Instrument (OLCI) of the Sentinel-3 satellites program is capable of providing images for the monitoring of such waters. Atmospheric correction is a necessary process in order to retrieve the desired surface-leaving radiance signal and several atmospheric correction methods have been developed through the years. However, many of these correction methods require programming language skills, or function as commercial software plugins, limiting their possibility of use by end users. Accordingly, in this study, the free SNAP software provided by the European Space Agency (ESA) was used to evaluate the possible differences between a partial atmospheric correction method accounting for Rayleigh scattering and a full atmospheric correction method (iCOR), applied on Sentinel-3 OLCI images of a shallow, highly eutrophic water reservoir. For the complete evaluation of the two methods, in addition to the comparison of the band reflectance values, chlorophyll (CHL) and cyanobacteria (CI) indices were also calculated and their values were intercompared. The results showed, that although the absolute values between the two correction methods did not coincide, there was a very good correlation between the two methods for both bands' reflectance (r > 0.73) and the CHL and CI indices values (r > 0.95). Therefore, since iCOR correction image processing time is 25 times longer than Rayleigh correction, it is proposed that the Rayleigh partial correction method may be alternatively used for seasonal water monitoring, especially in cases of long time-series, enhancing time and resources use efficiency. Further comparisons of the two methods in other inland water bodies and evaluation with in situ chlorophyll and cyanobacteria measurements will enhance the applicability of the methodology.

Remote detection of marine debris using Sentinel-2 imagery: A cautious note on spectral interpretations.

Remote detection of marine debris (also called marine litter) has received increased attention in the past decade, with the Multispectral Instruments (MSI) onboard the Sentinel-2A and Sentinel-2B satellites being the most used sensors. However, because of their mixed band resolutions and small sub-pixel coverage of debris within a pixel (e.g., <10 %), caution is required when interpreting the spectral shapes of MSI pixels. Otherwise, the spectrally distorted shapes may be misused as spectral endmembers (signatures) or interpreted as from certain types of floating matters. Here, using simulations and MSI data, I show the origin of the spectral distortions and emphasize why both pixel averaging and pixel subtraction are critical in algorithm design and spectral interpretation for the purpose of remote detection of marine debris using Sentinel-2 MSI sensors.

Quantifying Fundamental Vegetation Traits over Europe Using the Sentinel-3 OLCI Catalogue in Google Earth Engine.

Thanks to the emergence of cloud-computing platforms and the ability of machine learning methods to solve prediction problems efficiently, this work presents a workflow to automate spatiotemporal mapping of essential vegetation traits from Sentinel-3 (S3) imagery. The traits included leaf chlorophyll content (LCC), leaf area index (LAI), fraction of absorbed photosynthetically active radiation (FAPAR), and fractional vegetation cover (FVC), being fundamental for assessing photosynthetic activity on Earth. The workflow involved Gaussian process regression (GPR) algorithms trained on top-of-atmosphere (TOA) radiance simulations generated by the coupled canopy radiative transfer model (RTM) SCOPE and the atmospheric RTM 6SV. The retrieval models, named to S3-TOA-GPR-1.0, were directly implemented in Google Earth Engine (GEE) to enable the quantification of the traits from TOA data as acquired from the S3 Ocean and Land Colour Instrument (OLCI) sensor.Following good to high theoretical validation results with normalized root mean square error (NRMSE) ranging from 5% (FAPAR) to 19% (LAI), a three fold evaluation approach over diverse sites and land cover types was pursued: (1) temporal comparison against LAI and FAPAR products obtained from Moderate Resolution Imaging Spectroradiometer (MODIS) for the time window 2016-2020, (2) spatial difference mapping with Copernicus Global Land Service (CGLS) estimates, and (3) direct validation using interpolated in situ data from the VALERI network. For all three approaches, promising results were achieved. Selected sites demonstrated coherent seasonal patterns compared to LAI and FAPAR MODIS products, with differences between spatially averaged temporal patterns of only 6.59%. In respect of the spatial mapping comparison, estimates provided by the S3-TOA-GPR-1.0 models indicated highest consistency with FVC and FAPAR CGLS products. Moreover, the direct validation of our S3-TOA-GPR-1.0 models against VALERI estimates indicated with regard to jurisdictional claims in good retrieval performance for LAI, FAPAR and FVC. We conclude that our retrieval workflow of spatiotemporal S3 TOA data processing into GEE opens the path towards global monitoring of fundamental vegetation traits, accessible to the whole research community.

Satellite-derived cyanobacteria frequency and magnitude in headwaters & near-dam reservoir surface waters of the Southern U.S.

Reservoirs are dominant features of the modern hydrologic landscape and provide vital services. However, the unique morphology of reservoirs can create suitable conditions for excessive algae growth and associated cyanobacteria blooms in shallow in-flow reservoir locations by providing warm water environments with relatively high nutrient inputs, deposition, and nutrient storage. Cyanobacteria harmful algal blooms (cyanoHAB) are costly water management issues and bloom recurrence is associated with economic costs and negative impacts to human, animal, and environmental health. As cyanoHAB occurrence varies substantially within different regions of a water body, understanding in-lake cyanoHAB spatial dynamics is essential to guide reservoir monitoring and mitigate potential public exposure to cyanotoxins. Cloud-based computational processing power and high temporal frequency of satellites enables advanced pixel-based spatial analysis of cyanoHAB frequency and quantitative assessment of reservoir headwater in-flows compared to near-dam surface waters of individual reservoirs. Additionally, extensive spatial coverage of satellite imagery allows for evaluation of spatial trends across many dozens of reservoir sites. Surface water cyanobacteria concentrations for sixty reservoirs in the southern U.S. were estimated using 300 m resolution European Space Agency (ESA) Ocean and Land Colour Instrument (OLCI) satellite sensor for a five year period (May 2016-April 2021). Of the reservoirs studied, spatial analysis of OLCI data revealed 98% had more frequent cyanoHAB occurrence above the concentration of >100,000 cells/mL in headwaters compared to near-dam surface waters (P < 0.001). Headwaters exhibited greater seasonal variability with more frequent and higher magnitude cyanoHABs occurring mid-summer to fall. Examination of reservoirs identified extremely high concentration cyanobacteria events (>1,000,000 cells/mL) occurring in 70% of headwater locations while only 30% of near-dam locations exceeded this threshold. Wilcoxon signed-rank tests of cyanoHAB magnitudes using paired-observations (dates with observations in both a reservoir's headwater and near-dam locations) confirmed significantly higher concentrations in headwater versus near-dam locations (p < 0.001).

Evaluation of trophic state for inland waters through combining Forel-Ule Index and inherent optical properties.

Eutrophication is a severe environmental pollution problem for inland waters and poses significant threats to the water safety. Monitoring trophic state of inland waters using optical remote sensing generally requires the inversion of water quality parameters, such as chlorophyll-a, secchi depth, etc. However, the accurate inversion of these individual indicators remains challenging, while the associated retrieval errors can propagate and degrade the evaluation of trophic state. Hence, we proposed a novel monitoring method by developing a Trophic State Index (TSI) based on optical remote-sensing parameters, i.e., Forel-Ule index (FUI) and non-water absorption coefficient at 674 nm (referred to as at-w(674)) retrieved from Sentinel-3 Ocean and Land Color Instrument (OLCI) imagery. The estimated TSI showed favorable correspondence with observed water quality data, including coefficient of determination (r2 = 0.91), root mean squared error (RMSE = 5.54), and mean absolute percentage error (MAPE = 10.69%). Using the Sentinel-3 OLCI data, the proposed method also had very good performance in the field spectrum (MAPE = 5.25 % , RMSE = 3.36). The monthly trophic state evaluation also showed congruence (MAPE = 12.51 % , RMSE = 6.41) with surface water quality monthly report (SWQMR) from the Ministry of Environment and Ecology of the People's Republic of China. The monthly TSI showed favorable agreement for 23 ungauged lakes (RMSE = 7.26, MAPE = 12.78%), indicating potential utility for regional lake water quality monitoring. The proposed method was then applied to 47 other large (>50 km2) water bodies in the Middle-and-Lower watershed of Yangtze River and the Huaihe watershed to evaluate the spatial and temporal variation of trophic state from 2016 to 2020. The TSI results revealed several lakes, such as Lake Honghu and Lake Luoma, with rapidly deteriorating water quality during the study period, while other lakes show relative improvement (e.g., Xiashan Reservoir), indicating unbalanced environmental pressure over the region. Overall, this study showed promising performance and potential for satellite-based monitoring of regional aquatic environments.

Integration of Remote Sensing and Mexican Water Quality Monitoring System Using an Extreme Learning Machine.

Remote Sensing, as a driver for water management decisions, needs further integration with monitoring water quality programs, especially in developing countries. Moreover, usage of remote sensing approaches has not been broadly applied in monitoring routines. Therefore, it is necessary to assess the efficacy of available sensors to complement the often limited field measurements from such programs and build models that support monitoring tasks. Here, we integrate field measurements (2013-2019) from the Mexican national water quality monitoring system (RNMCA) with data from Landsat-8 OLI, Sentinel-3 OLCI, and Sentinel-2 MSI to train an extreme learning machine (ELM), a support vector regression (SVR) and a linear regression (LR) for estimating Chlorophyll-a (Chl-a), Turbidity, Total Suspended Matter (TSM) and Secchi Disk Depth (SDD). Additionally, OLCI Level-2 Products for Chl-a and TSM are compared against the RNMCA data. We observed that OLCI Level-2 Products are poorly correlated with the RNMCA data and it is not feasible to rely only on them to support monitoring operations. However, OLCI atmospherically corrected data is useful to develop accurate models using an ELM, particularly for Turbidity (R2 = 0.7). We conclude that remote sensing is useful to support monitoring systems tasks, and its progressive integration will improve the quality of water quality monitoring programs.

Phytoplankton bloom detection during the COVID-19 lockdown with remote sensing data: Using Copernicus Sentinel-3 for north-western Arabian/Persian Gulf case study.

To examine whether a country-wide COVID-19 lockdown affected phytoplankton development, variability of chlorophyll-a concentrations in the north-western Arabian/Persian Gulf (Kuwait Bay) was investigated using remote sensing instruments Sentinel OLCI between 2018 and 2020 and compared to available in situ collected data. Satellite-retrieved chlorophyll concentrations considerably increased in inshore waters of Kuwait Bay, 1-2 months following the initiation of the 24/7 curfew. The extremely high concentrations of dissolved inorganic nutrients, especially ammonia, and coincided phytoplankton bloom were revealed in June-July 2020 by opportunity field sampling, supporting the satellite-derived bloom detection. Remote sensing operational monitoring with high spatial resolution sensors provides an exceptional opportunity for emergency analysis and decision making in conditions of natural or anthropogenic crises, which forces the development of regional remote sensing algorithms for the shallow marine environment of the Gulf.

To what extent can Ulva and Sargassum be detected and separated in satellite imagery?

Blooms of floating macroalgae have been reported around the world, among which are recurrent blooms of Ulva prolifera and Sargassum horneri in the Yellow Sea and East China Sea. While satellite remote sensing has often been used to estimate their distributions and abundance as well as to trace their origins, because the algae mats are often much smaller than the size of an image pixel, it is unclear to what extent they can be detected and discriminated from each other in satellite imagery. Using data collected from laboratory experiments and by the Sentinel-3 OLCI (Ocean and Land Colour Instrument) and Sentinel-2 MSI (Multi Spectral Instrument) satellite instruments, we conduct simulated experiments to determine the lower detection limit and discrimination limit for these two macroalgae in different water environments and under different atmospheric conditions. For OLCI, the detection limit for both macroalgae is about 0.5% of a pixel, while the discrimination limit varies between 0.8% for clear water and 2% for turbid water. For MSI, the detection limit is about 2%, while the discrimination limit is about 6% for all water types. Below these two limits, detection and discrimination of macroalgae in these regions using the two sensors are subject to large uncertainties, thus requiring additional caution when interpreting algae areas and tracing algae origins.

Retrieving and Validating Leaf and Canopy Chlorophyll Content at Moderate Resolution: A Multiscale Analysis with the Sentinel-3 OLCI Sensor.

ESA's Eighth Earth Explorer mission "FLuorescence EXplorer" (FLEX) will be dedicated to the global monitoring of the chlorophyll fluorescence emitted by vegetation. In order to properly interpret the measured fluorescence signal, essential vegetation variables need to be retrieved concomitantly. FLEX will fly in tandem formation with Sentinel-3 (S3), which conveys the Ocean and Land Color Instrument (OLCI) that is designed to characterize the atmosphere and the terrestrial vegetation at a spatial resolution of 300 m. In support of FLEX's preparatory activities, this paper presents a first validation exercise of OLCI vegetation products against in situ data coming from the 2018 FLEXSense campaign. During this campaign, leaf chlorophyll content (LCC) and leaf area index (LAI) measurements were collected over croplands, while HyPlant DUAL images of the area were acquired at a 3 m spatial resolution. A multiscale validation strategy was pursued. First, estimates of these two variables, together with the combined canopy chlorophyll content (CCC = LCC × LAI), were obtained at the HyPlant spatial resolution and were compared against the in situ measurements. Second, the fine-scale retrieval maps from HyPlant were coarsened to the S3 spatial scale as a reference to assess the quality of the OLCI vegetation products. As an intermediary step, vegetation products extracted from Sentinel-2 data were used to compare retrievals at the in-between spatial resolution of 20 m. For all spatial scales, CCC delivered the most accurate estimates with the smallest prediction error obtained at the 300 m resolution (R2 of 0.74 and RMSE = 26.8 µg cm-2). Results of a scaling analysis suggest that CCC performs well at the different tested spatial resolutions since it presents a linear behavior across scales. LCC, on the other hand, was poorly retrieved at the 300 m scale, showing overestimated values over heterogeneous pixels. The introduction of a new LCC model integrating mixed reflectance spectra in its training enabled to improve by 16% the retrieval accuracy for this variable (RMSE = 10 µg cm-2 for the new model versus RMSE = 11.9 µg cm-2 for the former model).

A semi-analytical algorithm for deriving the particle size distribution slope of turbid inland water based on OLCI data: A case study in Lake Hongze.

The particle size distribution (PSD) slope (ξ) can indicate the predominant particle size, material composition, and inherent optical properties (IOPs) of inland waters. However, few semi-analytical methods have been proposed for deriving ξ from the surface remote sensing reflectance due to the variable optical state of inland waters. A semi-analytical algorithm was developed for inland waters having a wide range of turbidity and ξ in this study. Application of the proposed model to Ocean and Land Color Instrument (OLCI) imagery of the water body resulted in several important observations: (1) the proposed algorithm (754 nm and 779 nm combination) was capable of retrieving ξ with R2 being 0.72 (p < 0.01, n = 60), and MAPE and RMSE being 4.37% and 0.22 (n = 30) respectively; (2) the ξ in HZL was lower in summer than other seasons during the period considered, this variation was driven by the phenological cycle of algae and the runoff caused by rainfall; (3) the band optimization proposed in this study is important for calculating the particle backscattering slope (η) and deriving ξ because it is feasible for both algae dominant and sediment governed turbid inland lakes. These observations help improve our understanding of the relationship between IOPs and ξ, which are affected by different bio-optic processes and algal phenology in the lake environment.

Validation and Comparison of Water Quality Products in Baltic Lakes Using Sentinel-2 MSI and Sentinel-3 OLCI Data.

Inland waters, including lakes, are one of the key points of the carbon cycle. Using remote sensing data in lake monitoring has advantages in both temporal and spatial coverage over traditional in-situ methods that are time consuming and expensive. In this study, we compared two sensors on different Copernicus satellites: Multispectral Instrument (MSI) on Sentinel-2 and Ocean and Land Color Instrument (OLCI) on Sentinel-3 to validate several processors and methods to derive water quality products with best performing atmospheric correction processor applied. For validation we used in-situ data from 49 sampling points across four different lakes, collected during 2018. Level-2 optical water quality products, such as chlorophyll-a and the total suspended matter concentrations, water transparency, and the absorption coefficient of the colored dissolved organic matter were compared against in-situ data. Along with the water quality products, the optical water types were obtained, because in lakes one-method-to-all approach is not working well due to the optical complexity of the inland waters. The dynamics of the optical water types of the two sensors were generally in agreement. In most cases, the band ratio algorithms for both sensors with optical water type guidance gave the best results. The best algorithms to obtain the Level-2 water quality products were different for MSI and OLCI. MSI always outperformed OLCI, with R2 0.84-0.97 for different water quality products. Deriving the water quality parameters with optical water type classification should be the first step in estimating the ecological status of the lakes with remote sensing.

Envisat MERIS and Sentinel-3 OLCI satellite lake biophysical water quality flag dataset for the contiguous United States.

Monitoring lake biophysical water quality is a global challenge. Satellite remote sensing offers a technology for continuous water quality information in data poor regions throughout the United States. Quality assurance flag data are provided for the presence of snow/ice, land-adjacency, and unresolvable waterbodies supporting water quality derived measures from Envisat MEdium Resolution Imaging Spectrometer and Sentinel-3 Ocean and Land Colour Instrument for the continental United States. In addition, an updated Waterbody Data mask that contains valid waterbody and coastal ocean delineation is provided. The quality assurance flag datasets can benefit the scientific community in processing lake water quality throughout the contiguous United States by addressing errors from snow/ice, land adjacency, and land masking. The dataset presented here will be used in the development of national scale metrics for derived biophysical water quality in the US.

Quantifying vegetation biophysical variables from the Sentinel-3/FLEX tandem mission: Evaluation of the synergy of OLCI and FLORIS data sources.

The ESA's forthcoming FLuorescence EXplorer (FLEX) mission is dedicated to the global monitoring of the vegetation's chlorophyll fluorescence by means of an imaging spectrometer, FLORIS. In order to properly interpret the fluorescence signal in relation to photosynthetic activity, essential vegetation variables need to be retrieved concomitantly. FLEX will fly in tandem with Sentinel-3 (S3), which conveys the Ocean and Land Colour Instrument (OLCI) that is designed to characterize the atmosphere and the terrestrial vegetation at a spatial resolution of 300 m. In this work we present the retrieval models of four essential biophysical variables: (1) Leaf Area Index (LAI), (2) leaf chlorophyll content (Cab), (3) fraction of absorbed photosynthetically active radiation (fAPAR), and (4) fractional vegetation cover (FCover). These variables can be operationally inferred by hybrid retrieval approaches, which combine the generalization capabilities offered by radiative transfer models (RTMs) with the flexibility and computational efficiency of machine learning methods. The RTM SCOPE (Soil Canopy Observation, Photochemistry and Energy fluxes) was used to generate a database of reflectance spectra corresponding to a large variety of canopy realizations, which served subsequently as input to train a Gaussian Process Regression (GPR) algorithm for each targeted variable. Three sets of GPR models were developed, based on different spectral band settings: (1) OLCI (21 bands between 400 and 1040 nm), (2) FLORIS (281 bands between 500 and 780 nm), and (3) their synergy. Their respective performances were assessed based on simulated reflectance scenes. Regarding the retrieval of Cab, the OLCI model gave good model performances (R2: 0.91; RMSE: 7.6 µg. cm -2), yet superior accuracies were achieved as a result of FLORIS' higher spectral resolution (R2: 0.96; RMSE: 4.8 µg. cm -2). The synergy of both datasets did not further enhance the variable retrieval. Regarding LAI, the improvement of the model performances by using only FLORIS spectra (R2: 0.87; RMSE: 1.05 m2.m-2) rather than only OLCI spectra (R2: 0.86; RMSE: 1.12 m2.m-2) was less evident but merging both data sets was more beneficial (R2: 0.88; RMSE: 1.01 m2.m-2). Finally, the three data sources gave good model performances for the retrieval of fAPAR and Fcover, with the best performing model being the Synergy model (fAPAR: R2: 0.99; RMSE: 0.02 and FCover: R2: 0.98; RMSE: 0.04). The ability of the models to process real data was subsequently demonstrated by applying the OLCI models to S3 surface reflectance products acquired over Western Europe and Argentina. Obtained maps showed consistent patterns and variable ranges, and comparison against corresponding Sentinel-2 products (coarsened to a 300 m spatial resolution) led to reasonable matches (R2: 0.5-0.7). Altogether, given the availability of the multiple data sources, the FLEX tandem mission will foster unique opportunities to quantify essential vegetation properties, and hence facilitate the interpretation of the measured fluorescence levels.

Evaluation of Sentinel-3A OLCI Products Derived Using the Case-2 Regional CoastColour Processor over the Baltic Sea.

In this study, the Level-2 products of the Ocean and Land Colour Instrument (OLCI) data on Sentinel-3A are derived using the Case-2 Regional CoastColour (C2RCC) processor for the SentiNel Application Platform (SNAP) whilst adjusting the specific scatter of Total Suspended Matter (TSM) for the Baltic Sea in order to improve TSM retrieval. The remote sensing product "kd_z90max" (i.e., the depth of the water column from which 90% of the water-leaving irradiance are derived) from C2RCC-SNAP showed a good correlation with in situ Secchi depth (SD). Additionally, a regional in-water algorithm was applied to derive SD from the attenuation coefficient Kd(489) using a local algorithm. Furthermore, a regional in-water relationship between particle scatter and bench turbidity was applied to generate turbidity from the remote sensing product "iop_bpart" (i.e., the scattering coefficient of marine particles at 443 nm). The spectral shape of the remote sensing reflectance (Rrs) data extracted from match-up stations was evaluated against reflectance data measured in situ by a tethered Attenuation Coefficient Sensor (TACCS) radiometer. The L2 products were evaluated against in situ data from several dedicated validation campaigns (2016-2018) in the NW Baltic proper. All derived L2 in-water products were statistically compared to in situ data and the results were also compared to results for MERIS validation from the literature and the current S3 Level-2 Water (L2W) standard processor from EUMETSAT. The Chl-a product showed a substantial improvement (MNB 21%, RMSE 88%, APD 96%, n = 27) compared to concentrations derived from the Medium Resolution Imaging Spectrometer (MERIS), with a strong underestimation of higher values. TSM performed within an error comparable to MERIS data with a mean normalized bias (MNB) 25%, root-mean square error (RMSE) 73%, average absolute percentage difference (APD) 63% n = 23). Coloured Dissolved Organic Matter (CDOM) absorption retrieval has also improved substantially when using the product "iop_adg" (i.e., the sum of organic detritus and Gelbstoff absorption at 443 nm) as a proxy (MNB 8%, RMSE 56%, APD 54%, n = 18). The local SD (MNB 6%, RMSE 62%, APD 60%, n = 35) and turbidity (MNB 3%, RMSE 35%, APD 34%, n = 29) algorithms showed very good agreement with in situ data. We recommend the use of the SNAP C2RCC with regionally adjusted TSM-specific scatter for water product retrieval as well as the regional turbidity algorithm for Baltic Sea monitoring. Besides documenting the evaluation of the C2RCC processor, this paper may also act as a handbook on the validation of Ocean Colour data.

On the detectability of adjacency effects in ocean color remote sensing of mid-latitude coastal environments by SeaWiFS, MODIS-A, MERIS, OLCI, OLI and MSI.

The detectability of adjacency effects (AE) in ocean color remote sensing by SeaWiFS, MODIS-A, MERIS, OLCI, OLI and MSI is theoretically assessed for typical observation conditions up to 36 km offshore (20 km for MSI). The methodology detailed in Bulgarelli et al. (2014) is applied to expand previous investigations to the wide range of terrestrial land covers and water types usually encountered in mid-latitude coastal environments. Simulations fully account for multiple scattering within a stratified atmosphere bounded by a non-uniform reflecting surface, sea surface roughness, sun position and off-nadir sensor view. A harmonized comparison of AE is ensured by adjusting the radiometric sensitivity of each sensor to the same input radiance. Results show that average AE in data from MODIS-A, and from MERIS and OLCI in reduced spatial resolution, are still above the sensor noise level (NL) at 36 km offshore, except for AE caused by green vegetation at the red wavelengths. Conversely, in data from the less sensitive SeaWiFS, OLI and MSI sensors, as well as from MERIS and OLCI in full spatial resolution, sole AE caused by highly reflecting land covers (such as snow, dry vegetation, white sand and concrete) are above the sensor NL throughout the transect, while AE originated from green vegetation and bare soil at visible wavelengths may become lower than NL at close distance from the coast. Such a distance increases with the radiometric resolution of the sensor. It is finally observed that AE are slightly sensitive to the water type only at the blue wavelengths. Notably, for an atmospheric correction scheme inferring the aerosol properties from NIR data, perturbations induced by AE at NIR and visible wavelengths might compensate each other. As a consequence, biases induced by AE on radiometric products (e.g., the water-leaving radiance) are not strictly correlated to the intensity of the reflectance of the nearby land.