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1.
J Environ Sci (China) ; 147: 189-199, 2025 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-39003039

RESUMO

China's lowland rural rivers are facing severe eutrophication problems due to excessive phosphorus (P) from anthropogenic activities. However, quantifying P dynamics in a lowland rural river is challenging due to its complex interaction with surrounding areas. A P dynamic model (River-P) was specifically designed for lowland rural rivers to address this challenge. This model was coupled with the Environmental Fluid Dynamics Code (EFDC) and the Phosphorus Dynamic Model for lowland Polder systems (PDP) to characterize P dynamics under the impact of dredging in a lowland rural river. Based on a two-year (2020-2021) dataset from a representative lowland rural river in the Lake Taihu Basin, China, the coupled model was calibrated and achieved a model performance (R2>0.59, RMSE<0.04 mg/L) for total P (TP) concentrations. Our research in the study river revealed that (1) the time scale for the effectiveness of sediment dredging for P control was ∼300 days, with an increase in P retention capacity by 74.8 kg/year and a decrease in TP concentrations of 23% after dredging. (2) Dredging significantly reduced P release from sediment by 98%, while increased P resuspension and settling capacities by 16% and 46%, respectively. (3) The sediment-water interface (SWI) plays a critical role in P transfer within the river, as resuspension accounts for 16% of TP imports, and settling accounts for 47% of TP exports. Given the large P retention capacity of lowland rural rivers, drainage ditches and ponds with macrophytes are promising approaches to enhance P retention capacity. Our study provides valuable insights for local environmental departments, allowing a comprehensive understanding of P dynamics in lowland rural rivers. This enable the evaluation of the efficacy of sediment dredging in P control and the implementation of corresponding P control measures.


Assuntos
Monitoramento Ambiental , Sedimentos Geológicos , Fósforo , Rios , Poluentes Químicos da Água , Fósforo/análise , Rios/química , Sedimentos Geológicos/química , China , Poluentes Químicos da Água/análise , Eutrofização
2.
Environ Monit Assess ; 196(11): 1002, 2024 Oct 02.
Artigo em Inglês | MEDLINE | ID: mdl-39356366

RESUMO

This research introduces syN-BEATS, a novel ensemble deep learning model tailored for effective pollutant forecasting under conditions of limited data availability. Based on the N-BEATS architecture, syN-BEATS integrates various configurations with differing numbers of stacks and blocks, effectively combining weak and strong learning approaches. Our experiments show that syN-BEATS outperforms standard models, especially when using Bayesian optimization to fine-tune ensemble weights. The model consistently achieves low relative root mean square errors, proving its capacity for precise pollutant forecasting despite data constraints. A key aspect of this study is the use of data from only one meteorological and one air quality monitoring station per region, simulating environments with restricted monitoring capabilities. By applying this approach in regions with diverse climates and air quality levels, we thoroughly assess the model's flexibility and resilience under different environmental conditions. The results highlight syN-BEATS' ability to support the development of effective health alert systems that can detect specific airborne pollutants, even in areas with limited monitoring infrastructure. This advancement is crucial for enhancing environmental monitoring and public health management in under-resourced areas.


Assuntos
Poluentes Atmosféricos , Poluição do Ar , Teorema de Bayes , Monitoramento Ambiental , Previsões , Monitoramento Ambiental/métodos , Poluentes Atmosféricos/análise , Poluição do Ar/estatística & dados numéricos , Aprendizado Profundo
3.
J Environ Manage ; 370: 122703, 2024 Oct 01.
Artigo em Inglês | MEDLINE | ID: mdl-39357440

RESUMO

Accurate prediction of PM2.5 concentrations in ports is crucial for authorities to combat ambient air pollution effectively and protect the health of port staff. However, in port clusters formed by multiple neighboring ports, we encountered several challenges owing to the impact of unique meteorological conditions, potential correlation between PM2.5 levels in neighboring ports, and coupling influence of background pollutants in city zones. Therefore, considering the spatiotemporal correlation among the factors influencing PM2.5 concentration variations within the harbor cluster, we developed a novel blending ensemble deep learning model. The proposed model combined the strengths of four deep learning architectures: graph convolutional networks (GCN), long short-term memory networks (LSTM), residual neural networks (ResNet), and convolutional neural networks (CNN). GCN, LSTM, and ResNet served as the base models aimed at capturing the spatial correlation of PM2.5 concentrations in neighboring ports, the potential long-term dependence of meteorological factors and PM2.5 concentrations, and the effects of urban ambient air pollutants, respectively. Following the blending ensemble technique, the prediction outcomes of three base models were used as the input data for the meta-model CNN, which employs the blending ensemble technique to produce the final prediction results. Based on actual data obtained from 18 ports in Nanjing, the proposed model was compared and analyzed for its prediction performance against six state-of-the-art models. The findings revealed that the proposed model provided more accurate predictions. It reduced mean absolute error (MAE) by 10.59 %-20.00 %, reduced root mean square error (RMSE) by 13.22 %-17.11 %, improved coefficient of determination (R2) by 10 %-35.38 %, and improved accuracy (ACC) by 3.48 %-7.08 %. Additionally, the contribution of each component to the prediction performance of the proposed model was measured using a systematic ablation study. The results demonstrated that the GCN model exerted the most substantial influence on the prediction performance of the GCN-LSTM-ResNet model, followed by the LSTM model. The influence of urban background pollutants can significantly enhance the generalizability of the complete model. Moreover, a comparison with three blended ensemble models incorporating any two base models demonstrated that the GCN-LSTM-ResNet model exhibited superior prediction performance and was particularly excellent in predicting the occurrence of high-concentration events. Specifically, the GCN-LSTM-ResNet model improved MAE and RMSE by at least 12.3% and 9.2%, respectively, but reduced R2 and ACC by 26.1% and 6.8%, respectively. The proposed model provided reliable PM2.5 concentration prediction outcomes and decision support for air quality management strategies in dry bulk port clusters.

4.
Comput Biol Med ; 182: 109184, 2024 Sep 30.
Artigo em Inglês | MEDLINE | ID: mdl-39353297

RESUMO

PROBLEM: Diagnosing Autism Spectrum Disorder (ASD) remains a significant challenge, especially in regions where access to specialists is limited. Computer-based approaches offer a promising solution to make diagnosis more accessible. Eye tracking has emerged as a valuable technique in aiding the diagnosis of ASD. Typically, individuals' gaze patterns are monitored while they view videos designed according to established paradigms. In a previous study, we developed a method to classify individuals as having ASD or Typical Development (TD) by processing eye-tracking data using Random Forest ensembles, with a focus on a paradigm known as joint attention. AIM: This article aims to enhance our previous work by evaluating alternative algorithms and ensemble strategies, with a particular emphasis on the role of anticipation features in diagnosis. METHODS: Utilizing stimuli based on joint attention and the concept of "floating regions of interest" from our earlier research, we identified features that indicate gaze anticipation or delay. We then tested seven class balancing strategies, applied seven dimensionality reduction algorithms, and combined them with five different classifier induction algorithms. Finally, we employed the stacking technique to construct an ensemble model. RESULTS: Our findings showed a significant improvement, achieving an F1-score of 95.5%, compared to the 82% F1-score from our previous work, through the use of a heterogeneous stacking meta-classifier composed of diverse induction algorithms. CONCLUSION: While there remains an opportunity to explore new algorithms and features, the approach proposed in this article has the potential to be applied in clinical practice, contributing to increased accessibility to ASD diagnosis.

5.
Sci Rep ; 14(1): 22891, 2024 Oct 02.
Artigo em Inglês | MEDLINE | ID: mdl-39358367

RESUMO

Household electricity consumption (HEC) is changing over time, depends on multiple factors, and leads to effects on the prediction accuracy of the model. The objective of this work is to propose a novel methodology for improving HEC prediction accuracy. This study uses two original datasets, namely questionnaire survey (QS) and monthly consumption (MC), which contain data from 225 consumers from Maharashtra, India. The original datasets are combined to create three additional datasets, namely QS + MC, QS equation (QsEq) + next month's consumptions, and QsEq + MC. Furthermore, the HEC prediction accuracy is boosted by applying different approaches, like correlation methods, feature engineering techniques, data quality assessment, heterogeneous ensemble prediction (HEP), and the hybrid model. Five HEP models are created using dataset combinations and machine learning algorithms. Based on the MC dataset, the random forest provides the best prediction of RMSE (36.18 kWh), MAE (25.73 kWh), and R2 (0.76). Similarly, QsEq + MC dataset adaptive boosting provides a better prediction of RMSE (36.77 kWh), MAE (26.18 kWh), and R2 (0.76). This prediction accuracy is further increased using the proposed hybrid model to RMSE (22.02 kWh), MAE (13.04 kWh), and R2 (0.92). This research work benefits researchers, policymakers, and utility companies in obtaining accurate prediction models and understanding HEC.

6.
Sci Rep ; 14(1): 22885, 2024 Oct 02.
Artigo em Inglês | MEDLINE | ID: mdl-39358373

RESUMO

Predicting rock tunnel squeezing in underground projects is challenging due to its intricate and unpredictable nature. This study proposes an innovative approach to enhance the accuracy and reliability of tunnel squeezing prediction. The proposed method combines ensemble learning techniques with Q-learning and online Markov chain integration. A deep learning model is trained on a comprehensive database comprising tunnel parameters including diameter (D), burial depth (H), support stiffness (K), and tunneling quality index (Q). Multiple deep learning models are trained concurrently, leveraging ensemble learning to capture diverse patterns and improve prediction performance. Integration of the Q-learning-Online Markov Chain further refines predictions. The online Markov chain analyzes historical sequences of tunnel parameters and squeezing class transitions, establishing transition probabilities between different squeezing classes. The Q-learning algorithm optimizes decision-making by learning the optimal policy for transitioning between tunnel states. The proposed model is evaluated using a dataset from various tunnel construction projects, assessing performance through metrics like accuracy, precision, recall, and F1-score. Results demonstrate the efficiency of the ensemble deep learning model combined with Q-learning-Online Markov Chain in predicting surrounding rock tunnel squeezing. This approach offers insights into parameter interrelationships and dynamic squeezing characteristics, enabling proactive planning and support measures implementation to mitigate tunnel squeezing hazards and ensure underground structure safety. Experimental results show the model achieves a prediction accuracy of 98.11%, surpassing individual CNN and RNN models, with an AUC value of 0.98.

7.
Front Big Data ; 7: 1393758, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-39364222

RESUMO

Detecting lung diseases in medical images can be quite challenging for radiologists. In some cases, even experienced experts may struggle with accurately diagnosing chest diseases, leading to potential inaccuracies due to complex or unseen biomarkers. This review paper delves into various datasets and machine learning techniques employed in recent research for lung disease classification, focusing on pneumonia analysis using chest X-ray images. We explore conventional machine learning methods, pretrained deep learning models, customized convolutional neural networks (CNNs), and ensemble methods. A comprehensive comparison of different classification approaches is presented, encompassing data acquisition, preprocessing, feature extraction, and classification using machine vision, machine and deep learning, and explainable-AI (XAI). Our analysis highlights the superior performance of transfer learning-based methods using CNNs and ensemble models/features for lung disease classification. In addition, our comprehensive review offers insights for researchers in other medical domains too who utilize radiological images. By providing a thorough overview of various techniques, our work enables the establishment of effective strategies and identification of suitable methods for a wide range of challenges. Currently, beyond traditional evaluation metrics, researchers emphasize the importance of XAI techniques in machine and deep learning models and their applications in classification tasks. This incorporation helps in gaining a deeper understanding of their decision-making processes, leading to improved trust, transparency, and overall clinical decision-making. Our comprehensive review serves as a valuable resource for researchers and practitioners seeking not only to advance the field of lung disease detection using machine learning and XAI but also from other diverse domains.

8.
J Imaging Inform Med ; 2024 Oct 04.
Artigo em Inglês | MEDLINE | ID: mdl-39367198

RESUMO

Predicting long-term clinical outcomes based on the early DSC PWI MRI scan is valuable for prognostication, resource management, clinical trials, and patient expectations. Current methods require subjective decisions about which imaging features to assess and may require time-consuming postprocessing. This study's goal was to predict multilabel 90-day modified Rankin Scale (mRS) score in acute ischemic stroke patients by combining ensemble models and different configurations of radiomic features generated from Dynamic susceptibility contrast perfusion-weighted imaging. In Follow-up studies, a total of 70 acute ischemic stroke (AIS) patients underwent magnetic resonance imaging within 24 hours poststroke and had a follow-up scan. In the single study, 150 DSC PWI Image scans for AIS patients. The DRF are extracted from DSC-PWI Scans. Then Lasso algorithm is applied for feature selection, then new features are generated from initial and follow-up scans. Then we applied different ensemble models to classify between three classes normal outcome (0, 1 mRS score), moderate outcome (2,3,4 mRS score), and severe outcome (5,6 mRS score). ANOVA and post-hoc Tukey HSD tests confirmed significant differences in model style performance across various studies and classification techniques. Stacking models consistently on average outperformed others, achieving an Accuracy of 0.68 ± 0.15, Precision of 0.68 ± 0.17, Recall of 0.65 ± 0.14, and F1 score of 0.63 ± 0.15 in the follow-up time study. Techniques like Bo_Smote showed significantly higher recall and F1 scores, highlighting their robustness and effectiveness in handling imbalanced data. Ensemble models, particularly Bagging and Stacking, demonstrated superior performance, achieving nearly 0.93 in Accuracy, 0.95 in Precision, 0.94 in Recall, and 0.94 in F1 metrics in follow-up conditions, significantly outperforming single models. Ensemble models based on radiomics generated from combining Initial and follow-up scans can be used to predict multilabel 90-day stroke outcomes with reduced subjectivity and user burden.

9.
Front Artif Intell ; 7: 1410841, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-39359646

RESUMO

This paper investigates uncertainty quantification (UQ) techniques in multi-class classification of chest X-ray images (COVID-19, Pneumonia, and Normal). We evaluate Bayesian Neural Networks (BNN) and the Deep Neural Network with UQ (DNN with UQ) techniques, including Monte Carlo dropout, Ensemble Bayesian Neural Network (EBNN), Ensemble Monte Carlo (EMC) dropout, across different evaluation metrics. Our analysis reveals that DNN with UQ, especially EBNN and EMC dropout, consistently outperform BNNs. For example, in Class 0 vs. All, EBNN achieved a UAcc of 92.6%, UAUC-ROC of 95.0%, and a Brier Score of 0.157, significantly surpassing BNN's performance. Similarly, EMC Dropout excelled in Class 1 vs. All with a UAcc of 83.5%, UAUC-ROC of 95.8%, and a Brier Score of 0.165. These advanced models demonstrated higher accuracy, better discriaminative capability, and more accurate probabilistic predictions. Our findings highlight the efficacy of DNN with UQ in enhancing model reliability and interpretability, making them highly suitable for critical healthcare applications like chest X-ray imageQ6 classification.

10.
Front Genet ; 15: 1481787, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-39371416

RESUMO

Introduction: Gene regulatory networks (GRNs) reveal the intricate interactions between and among genes, and understanding these interactions is essential for revealing the molecular mechanisms of cancer. However, existing algorithms for constructing GRNs may confuse regulatory relationships and complicate the determination of network directionality. Methods: We propose a new method to construct GRNs based on causal strength and ensemble regression (CSER) to overcome these issues. CSER uses conditional mutual inclusive information to quantify the causal associations between genes, eliminating indirect regulation and marginal genes. It considers linear and nonlinear features and uses ensemble regression to infer the direction and interaction (activation or regression) from regulatory to target genes. Results: Compared to traditional algorithms, CSER can construct directed networks and infer the type of regulation, thus demonstrating higher accuracy on simulated datasets. Here, using real gene expression data, we applied CSER to construct a colorectal cancer GRN and successfully identified several key regulatory genes closely related to colorectal cancer (CRC), including ADAMDEC1, CLDN8, and GNA11. Discussion: Importantly, by integrating immune cell and microbial data, we revealed the complex interactions between the CRC gene regulatory network and the tumor microenvironment, providing additional new biomarkers and therapeutic targets for the early diagnosis and prognosis of CRC.

11.
Prog Med Chem ; 63(1): 1-60, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-39370240

RESUMO

This review article explores the pivotal role of conformational drivers in the discovery of drug-like molecules and illustrates their significance through real-life examples. Understanding molecular conformation is paramount to drug hunting as it can impact on- and off-target potency, metabolism, permeability, and solubility. Each conformational driver or effector is described and exemplified in a separate section. The final section is dedicated to NMR spectroscopy and illustrates its utility as an essential tool for conformational design.


Assuntos
Desenho de Fármacos , Conformação Molecular , Humanos , Espectroscopia de Ressonância Magnética , Preparações Farmacêuticas/química
12.
Stat Methods Med Res ; : 9622802241275401, 2024 Oct 09.
Artigo em Inglês | MEDLINE | ID: mdl-39380507

RESUMO

We are addressing the problem of estimating conditional average treatment effects with a continuous treatment and a continuous response, using random forests. We explore two general approaches: building trees with a split rule that seeks to increase the heterogeneity of the treatment effect estimation and building trees to predict Y as a proxy target variable. We conduct a simulation study to investigate several aspects including the presence or absence of confounding and colliding effects and the merits of locally centering the treatment and/or the response. Our study incorporates both existing and new implementations of random forests. The results indicate that locally centering both the response and treatment variables is generally the best strategy, and both general approaches are viable. Additionally, we provide an illustration using data from the 1987 National Medical Expenditure Survey.

13.
Water Environ Res ; 96(10): e11140, 2024 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-39382139

RESUMO

Chlorophyll-a (Chl-a) concentrations, a key indicator of algal blooms, were estimated using the XGBoost machine learning model with 23 variables, including water quality and meteorological factors. The model performance was evaluated using three indices: root mean square error (RMSE), RMSE-observation standard deviation ratio (RSR), and Nash-Sutcliffe efficiency. Nine datasets were created by averaging 1 hour data to cover time frequencies ranging from 1 hour to 1 month. The dataset with relatively high observation frequencies (1-24 h) maintained stability, with an RSR ranging between 0.61 and 0.65. However, the model's performance declined significantly for datasets with weekly and monthly intervals. The Shapley value (SHAP) analysis, an explainable artificial intelligence method, was further applied to provide a quantitative understanding of how environmental factors in the watershed impact the model's performance and is also utilized to enhance the practical applicability of the model in the field. The number of input variables for model construction increased sequentially from 1 to 23, starting from the variable with the highest SHAP value to that with the lowest. The model's performance plateaued after considering five or more variables, demonstrating that stable performance could be achieved using only a small number of variables, including relatively easily measured data collected by real-time sensors, such as pH, dissolved oxygen, and turbidity. This result highlights the practicality of employing machine learning models and real-time sensor-based measurements for effective on-site water quality management. PRACTITIONER POINTS: XAI quantifies the effects of environmental factors on algal bloom prediction models The effects of input variable frequency and seasonality were analyzed using XAI XAI analysis on key variables ensures cost-effective model development.


Assuntos
Inteligência Artificial , Eutrofização , Monitoramento Ambiental/métodos , Aprendizado de Máquina , Clorofila A , Modelos Teóricos , Qualidade da Água
14.
Genome Biol ; 25(1): 260, 2024 Oct 08.
Artigo em Inglês | MEDLINE | ID: mdl-39379999

RESUMO

BACKGROUND: Polygenic risk score (PRS) is a major research topic in human genetics. However, a significant gap exists between PRS methodology and applications in practice due to often unavailable individual-level data for various PRS tasks including model fine-tuning, benchmarking, and ensemble learning. RESULTS: We introduce an innovative statistical framework to optimize and benchmark PRS models using summary statistics of genome-wide association studies. This framework builds upon our previous work and can fine-tune virtually all existing PRS models while accounting for linkage disequilibrium. In addition, we provide an ensemble learning strategy named PUMAS-ensemble to combine multiple PRS models into an ensemble score without requiring external data for model fitting. Through extensive simulations and analysis of many complex traits in the UK Biobank, we demonstrate that this approach closely approximates gold-standard analytical strategies based on external validation, and substantially outperforms state-of-the-art PRS methods. CONCLUSIONS: Our method is a powerful and general modeling technique that can continue to combine the best-performing PRS methods out there through ensemble learning and could become an integral component for all future PRS applications.


Assuntos
Benchmarking , Estudo de Associação Genômica Ampla , Herança Multifatorial , Estudo de Associação Genômica Ampla/métodos , Humanos , Modelos Genéticos , Predisposição Genética para Doença , Desequilíbrio de Ligação , Estratificação de Risco Genético
15.
Water Res ; 267: 122544, 2024 Sep 29.
Artigo em Inglês | MEDLINE | ID: mdl-39383645

RESUMO

Remote sensing water quality monitoring technology can effectively supplement the shortcomings of traditional water quality monitoring methods in spatiotemporal dynamic monitoring capabilities. At present, although the spectral feature-based remote sensing water quality inversion models have achieved many successes, there could still be a problem of insufficient generalization ability in monitoring the water quality of complex river networks in large cities. In this paper, we propose a spectro-environmental factors integrated ensemble learning model for urban river network water quality inversion. We analyzed the correlation between water quality parameters, spectral reflectance, and environmental factors based on an in-situ dataset collected in the northern part of Shanghai. Using the Hot Spot Analysis (Getis-Ord Gi*), we found that river network water quality parameters have different patterns in different urban functional zones. Furthermore, daily average temperature, total rainfall within the seven days, and several band combinations were also selected as the environmental and spectral features using factor analysis and Pearson correlation coefficient analysis. After the feature analysis, the spectro-environmental factors integrated ensemble learning model was trained. Compared with the spectral-based machine learning inversion models, the coefficients of determination R2 increased by about 0.50. Our model was also tested in three different test areas within and outside the in-situ sampling areas in Shanghai based on low-altitude multispectral remote sensing images. The R2 results for total phosphorus (TP), ammonia nitrogen (NH3-N), and chemical oxygen demand (COD) within the in-situ sampling areas were 0.52, 0.58, and 0.56 respectively. The mean absolute percentage error (MAPE) results were 53.36%, 63.95%, and 22.46% respectively. After adding the area outside the in-situ sampling areas, the R2 results for TP, NH3-N, and COD were 0.47, 0.47, and 0.53. The MAPE were 49.38%, 74.46%, and 20.49%. Our research provided a new remote sensing water quality inversion method to be utilized in complex urban river networks which exhibited solid accuracy and generalization ability.

16.
Sci Rep ; 14(1): 23299, 2024 Oct 07.
Artigo em Inglês | MEDLINE | ID: mdl-39375462

RESUMO

This paper proposes development of optimized heterogeneous ensemble models for prediction of responses based on given sets of input parameters for wire electrical discharge machining (WEDM) processes, which have found immense applications in many of the present-day manufacturing industries because of their ability to generate complicated 2D and 3D profiles on hard-to-machine engineering materials. These ensembles are developed combining predictions of the three base models, i.e. random forest, support vector machine and ridge regression. These three base models are first framed utilizing the training datasets, providing predictions for all the responses under consideration. Based on these predictions, two optimization problems are formulated for each of the responses, while minimizing root mean squared error and mean absolute error, for subsequent development of two optimized ensembles whose predictions are the weighted sum of the predictions of the base models. The prediction performance of all the five models is ascertained through nine statistical metrics, after which a cumulative quality loss-based multi-response signal-to-noise (MRSN) ratio for each model is computed, for each of the responses, where a higher MRSN ratio indicates greater accuracy in prediction. This study is conducted using two experimental datasets of WEDM process. Overall, the optimized ensemble models having higher MRSN ratios than the base models are indicated to deliver better prediction accuracy.

17.
Sci Rep ; 14(1): 23489, 2024 10 08.
Artigo em Inglês | MEDLINE | ID: mdl-39379448

RESUMO

Automated segmentation of biomedical image has been recognized as an important step in computer-aided diagnosis systems for detection of abnormalities. Despite its importance, the segmentation process remains an open challenge due to variations in color, texture, shape diversity and boundaries. Semantic segmentation often requires deeper neural networks to achieve higher accuracy, making the segmentation model more complex and slower. Due to the need to process a large number of biomedical images, more efficient and cheaper image processing techniques for accurate segmentation are needed. In this article, we present a modified deep semantic segmentation model that utilizes the backbone of EfficientNet-B3 along with UNet for reliable segmentation. We trained our model on Non-melanoma skin cancer segmentation for histopathology dataset to divide the image in 12 different classes for segmentation. Our method outperforms the existing literature with an increase in average class accuracy from 79 to 83%. Our approach also shows an increase in overall accuracy from 85 to 94%.


Assuntos
Processamento de Imagem Assistida por Computador , Redes Neurais de Computação , Semântica , Neoplasias Cutâneas , Pele , Humanos , Neoplasias Cutâneas/diagnóstico por imagem , Neoplasias Cutâneas/patologia , Processamento de Imagem Assistida por Computador/métodos , Pele/diagnóstico por imagem , Pele/patologia , Aprendizado Profundo , Algoritmos
18.
Comput Biol Med ; 183: 109188, 2024 Oct 11.
Artigo em Inglês | MEDLINE | ID: mdl-39395344

RESUMO

Fetal echocardiography, a specialized ultrasound application commonly utilized for fetal heart assessment, can greatly benefit from automated segmentation of anatomical structures, aiding operators in their evaluations. We introduce a novel approach that combines various deep learning models for segmenting key anatomical structures in 2D ultrasound images of the fetal heart. Our ensemble method combines the raw predictions from the selected models, obtaining the optimal set of segmentation components that closely approximate the distribution of the fetal heart, resulting in improved segmentation outcomes. The selection of these components involves sequential and hierarchical geometry filtering, focusing on the analysis of shape and relative distances. Unlike other ensemble strategies that average predictions, our method works as a shape selector, ensuring that the final segmentation aligns more accurately with anatomical expectations. Considering a large private dataset for model training and evaluation, we present both numerical and visual experiments highlighting the advantages of our method in comparison to the segmentations produced by the individual models and a conventional average ensemble. Furthermore, we show some applications where our method proves instrumental in obtaining reliable estimations.

19.
Sci Rep ; 14(1): 23516, 2024 Oct 09.
Artigo em Inglês | MEDLINE | ID: mdl-39384798

RESUMO

TextNetTopics (Yousef et al. in Front Genet 13:893378, 2022. https://doi.org/10.3389/fgene.2022.893378 ) is a recently developed approach that performs text classification-based topics (a topic is a group of terms or words) extracted from a Latent Dirichlet Allocation topic modeling as features rather than individual words. Following this approach enables TextNetTopics to fulfill dimensionality reduction while preserving and embedding more thematic and semantic information into the text document representations. In this article, we introduced a novel approach, the Ensemble Topic Model for Topic Selection (ENTM-TS), an advancement of TextNetTopics. ENTM-TS integrates multiple topic models using the Grouping, Scoring, and Modeling approach, thereby mitigating the performance variability introduced by employing individual topic modeling methods within TextNetTopics. Additionally, we performed a thorough comparative study to evaluate TextNetTopics' performance using eleven state-of-the-art topic modeling algorithms. We used the extracted topics for each as input to the G component in the TextNetTopics tool to select the most compelling topic model regarding their predictive behavior for text classification. We conducted our comprehensive evaluation utilizing the Drug-Induced Liver Injury textual dataset from the CAMDA community and the WOS-5736 dataset. The experimental results show that the Latent Semantic Indexing provides comparable performance measures with fewer discriminative features when compared with other topic modeling methods. Moreover, our evaluation reveals that the performance of ENTM-TS surpasses or aligns with the optimal outcomes obtained from individual topic models across the two datasets, establishing it as a robust and effective enhancement in text classification tasks.

20.
Primates ; 2024 Sep 06.
Artigo em Inglês | MEDLINE | ID: mdl-39240408

RESUMO

Because of the universal decline in biodiversity, it is important to map and assess the populations of the endangered species, especially those endemic to small regions, in their remaining wild habitats. With the main focus on the distribution and habitat suitability of the endangered lion-tailed macaque, Macaca silenus, we carried out a survey on primates in the Kodagu region of the Western Ghats, an area not properly explored earlier. The survey trails covered a length of 523 km. We encountered 185 groups of primates including 112, 12, 43 and 18 groups of bonnet macaques, M. radiata, lion-tailed macaques, black-footed gray langurs, Semnopithecus hypoleucos and Nilgiri langurs, S. johnii, respectively. The Brahmagiri Hills harbored the northernmost group of Nilgiri langurs and the southernmost group of black-footed gray langurs. Habitat suitability analysis revealed that the distribution of bonnet macaques and black-footed gray langurs was associated with a large number of environmental factors whereas only a few factors each influenced the distribution of other primate species. When considering the whole landscape spanning over 1295 km2, black-footed gray langurs (961 km2), bonnet macaques (910 km2) and lion-tailed macaques (779 km2) had more suitable habitats than Nilgiri langurs (258 km2). The reserved forests between two Wildlife Sanctuaries covered an area of 311 km2 where 282 km2, 228 km2, 272 km2, and 140 km2 areas were found to be suitable for lion-tailed macaques, bonnet macaques, black-footed gray langurs and Nilgiri langurs, respectively. We recommend these reserved forests to be included in the protected area network. The study brings out the Kodagu region to be a potential conservation area not only for the lion-tailed macaques but also for other primate species.

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