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1.
Sensors (Basel) ; 24(16)2024 Aug 15.
Artigo em Inglês | MEDLINE | ID: mdl-39204982

RESUMO

A digitizer is considered one of the fundamental components of an earthquake monitoring system. In this paper, we design and implement a high accuracy seismic digitizer. The implemented digitizer consists of several blocks, i.e., the analog-to-digital converter (ADC), GPS receiver, and microprocessor. Three finite impulse response (FIR) filters are used to decimate the sampling rate of the input seismic data according to user needs. A graphical user interface (GUI) has been designed for enabling the user to monitor the seismic waveform in real time, and process and adjust the parameters of the acquisition unit. The system casing is designed to resist harsh conditions of the environment. The prototype can represent the three component sensors data in the standard MiniSEED format. The digitizer stream seismic data from the remote station to the main center is based on TCP/IP connection. This protocol ensures data transmission without any losses as long as the data still exist in the ring buffer. The prototype was calibrated by real field testing. The prototype digitizer is integrated with the Egyptian National Seismic Network (ENSN), where a commercial instrument is already installed. Case studies shows that, for the same event, the prototype station improves the solution of the ENSN by giving accurate timing and seismic event parameters. Field test results shows that the event arrival time and the amplitude are approximately the same between the prototype digitizer and the calibrated digitizer. Furthermore, the frequency contents are similar between the two digitizers. Therefore, the prototype digitizer captures the main seismic parameters accurately, irrespective of noise existence.

2.
Cureus ; 15(10): e46566, 2023 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-37936990

RESUMO

Individuals with bilateral transfemoral (TF) amputation experience difficulties when walking with lower limb prostheses. Walking with prostheses is even more difficult when the cause of the amputation is nontraumatic, or the gender is female. We provided prosthetic rehabilitation to a woman who underwent bilateral TF amputation due to internal disease.  A 42-year-old woman underwent bilateral TF amputation for ischemic necrosis of the lower extremities during septic shock treatment. Upon admission to our convalescent rehabilitation ward 3 months after surgery, the patient weighed 32 kg and was underweight. After admission, she underwent strength training of the trunk and hip muscles, hip joint range of motion exercises, and bottom shuffle exercises on the physical therapy table. The prosthetist created stubby prostheses for standing and standing-up exercises on the floor, as well as gait exercises. We gradually extended the length of her prostheses and subsequently switched her knee joints to Ottobock locking and polycentric knees and eventually to Kenevo, which are microprocessor-controlled prosthetic knees (MPK). During occupational sessions, she practiced household activities such as washing dishes, cleaning, and cooking while wearing her prostheses. Six months after admission, the patient was discharged and could walk outdoors alone with two canes without using a wheelchair. At discharge, the Kenevo modes were Mode C on the right and Mode B + on the left. The patient's weight recovered to 41 kg. The patient completed the 10-meter walk test at 0.50 m/s at a comfortable walking speed, the 6-minute walk test at 180 meters, and the timed up and go (TUG) test in 26 seconds. The motor Functional Independence Measure (FIM) score was improved from 60 on admission to 83 on discharge.  Strengthening the hip and trunk muscles, improving endurance and balance, preventing hip contracture, and maintaining the hip range of motion are necessary for walking with bilateral TF prostheses. In the prosthetic rehabilitation of bilateral TF amputations, stubby prostheses, protocols for gradual extension of the prosthetic length, and Kenevo, a mode-changeable MPK, are helpful. MPK is essential for individuals with bilateral TF amputations to walk independently and use their prostheses daily. This report is a valuable reference for healthcare professionals involved with bilateral TF amputees in the future who need prosthetic rehabilitation.

3.
Methods Enzymol ; 692: 217-230, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-37925180

RESUMO

The Microprocessor complex (MP) is a vital component in the biogenesis of microRNAs (miRNAs) in animals. It plays a crucial role in the biogenesis of microRNAs (miRNAs) in mammals as it cleaves primary miRNAs (pri-miRNAs) to initiate their production. The accurate enzymatic activity of MP is critical to ensuring proper sequencing and expression of miRNAs and their correct cellular functions. RNA elements in pri-miRNAs, including secondary structures and sequencing motifs, RNA editing and modifications, and cofactors, can impact MP cleavage and affect miRNA expression and sequence. To evaluate MP cleavage activity with various RNA substrates under different conditions, we set up an in vitro pri-miRNA cleavage assay. This involves purifying human MP from HEK293E cells, synthesizing pri-miRNAs using in vitro transcription, and performing pri-miRNA cleavage assays using basic laboratory equipment and reagents. These procedures can be performed in various labs and improved for high-throughput analysis of enzymatic activities with thousands of RNA substrates.


Assuntos
MicroRNAs , Processamento Pós-Transcricional do RNA , Animais , Humanos , Ribonuclease III/química , Ribonuclease III/genética , Ribonuclease III/metabolismo , MicroRNAs/química , Edição de RNA , Microcomputadores , Mamíferos/genética
4.
Proc Natl Acad Sci U S A ; 120(41): e2306727120, 2023 10 10.
Artigo em Inglês | MEDLINE | ID: mdl-37788316

RESUMO

The nuclear cleavage of a suboptimal primary miRNA hairpin by the Drosha/DGCR8 complex ("Microprocessor") can be enhanced by an optimal miRNA neighbor, a phenomenon termed cluster assistance. Several features and biological impacts of this new layer of miRNA regulation are not fully known. Here, we elucidate the parameters of cluster assistance of a suboptimal miRNA and also reveal competitive interactions amongst optimal miRNAs within a cluster. We exploit cluster assistance as a functional assay for suboptimal processing and use this to invalidate putative suboptimal substrates, as well as identify a "solo" suboptimal miRNA. Finally, we report complexity in how specific mutations might affect the biogenesis of clustered miRNAs in disease contexts. This includes how an operon context can buffer the effect of a deleterious processing variant, but reciprocally how a point mutation can have a nonautonomous effect to impair the biogenesis of a clustered, suboptimal, neighbor. These data expand our knowledge regarding regulated miRNA biogenesis in humans and represent a functional assay for empirical definition of suboptimal Microprocessor substrates.


Assuntos
MicroRNAs , Humanos , MicroRNAs/genética , MicroRNAs/metabolismo , Processamento Pós-Transcricional do RNA/genética , Proteínas de Ligação a RNA/metabolismo , Ribonuclease III/genética , Ribonuclease III/metabolismo
5.
Disabil Rehabil ; : 1-14, 2023 Sep 26.
Artigo em Inglês | MEDLINE | ID: mdl-37752724

RESUMO

INTRODUCTION: The C-Brace microprocessor stance and swing control orthosis was designed to overcome safety and functional limitations of traditional knee-ankle-foot orthoses (KAFOs) for individuals with lower limb paresis. However, a systematic comparison to established KAFO types has not been performed in a bigger sample. METHODS: International multicenter, randomized, controlled, cross-over clinical trial. Legacy KAFO users at risk of falling were randomized to KAFO/C-Brace or C-Brace/KAFO use for three months with each orthosis. Primary outcome was balance assessed with the Berg Balance Scale (BBS). Secondary outcomes were falls, mobility, function, and quality of life. RESULTS: Intention-to-treat analysis with 102 participants. With the C-Brace, the BBS improved by 3.3 ± 6.3 points (p < 0.0001). Significantly fewer participants presented BBS scores <40 indicative of increased fall risk (16 vs. 36, p = 0.018). Mean falls reduced from 4.0 ± 16.8 to 1.1 ± 3.3 (p = 0.002). Outcomes for function, mobility, and quality of life showed significant improvements with the C-Brace. DISCUSSION: The improvements in fall risk and mobility can be attributed to the stumble recovery and controlled knee flexion during weight bearing of the C-Brace and have a positive impact on the quality of life of users. CONCLUSION: The C-Brace represents an option for KAFO users with increased fall risk and reduced mobility.


When prescribing traditional knee-ankle-foot orthoses (KAFOs), their known limitations, such as limited function and mobility, and the requirement to walk with compensatory mechanisms, especially on non-level terrains, should be considered.For patients with compromised balance and increased risk of falling when using a traditional KAFO, a microprocessor stance and swing control orthosis (MP-SSCO) may be considered as an orthotic option to reduce their fall risk.For patients with mobility restrictions using a traditional KAFO, a MP-SSCO may be considered to improve function, mobility, reintegration into normal living, and quality of life.

6.
Clin Biomech (Bristol, Avon) ; 108: 106061, 2023 08.
Artigo em Inglês | MEDLINE | ID: mdl-37556922

RESUMO

BACKGROUND: Individuals with unilateral transfemoral amputation walk with increased levels of asymmetry, and this is associated with reduced gait efficiency, back pain and overuse of the intact limb. This study investigated the effect of walking with a unilateral absence of loading response knee flexion on the symmetry of anterior-posterior kinetics and centre of mass accelerations. METHODS: A retrospective cohort study design was used, assessing three-dimensional gait data from individuals with unilateral transfemoral amputation (n = 56). The anterior-posterior gait variables analysed included; peak ground reaction forces, impulse, centre of mass acceleration, as well as rate of vertical ground reaction force increase in early stance. With respect to these variables, this study assessed the symmetry between intact and prosthetic limbs, compared intact limbs against a healthy unimpaired control group, and evaluated effect on symmetry of microprocessor controlled knee provision. FINDINGS: Significant between-limb asymmetries were found between intact and prosthetic limbs across all variables (p < 0.0001). Intact limbs showed excessive loading when compared with control group limbs after speed normalisation across all variables (p < 0.0001). No improvement in kinetic symmetry following microprocessor controlled knee provision was found. INTERPRETATION: The gait asymmetries for individuals with transfemoral amputation identified in this study suggest that more should be done by developers to address the resultant overloading of the intact limb, as this is thought to have negative long-term effects. The provision of microprocessor controlled knees did not appear to improve the asymmetries faced by individuals with transfemoral amputation, and clinicians should be aware of this when managing patient expectations.


Assuntos
Amputados , Membros Artificiais , Humanos , Cinética , Estudos Retrospectivos , Marcha/fisiologia , Amputação Cirúrgica , Caminhada/fisiologia , Microcomputadores , Fenômenos Biomecânicos/fisiologia
7.
Sensors (Basel) ; 23(11)2023 Jun 04.
Artigo em Inglês | MEDLINE | ID: mdl-37300053

RESUMO

The requirement for alternatives in roll-to-roll (R2R) processing to expand thin film inspection in wider substrates at lower costs and reduced dimensions, and the need to enable newer control feedback options for these types of processes, represents an opportunity to explore the applicability of newer reduced-size spectrometers sensors. This paper presents the hardware and software development of a novel low-cost spectroscopic reflectance system using two state-of-the-art sensors for thin film thickness measurements. The parameters to enable the thin film measurements using the proposed system are the light intensity for two LEDs, the microprocessor integration time for both sensors and the distance from the thin film standard to the device light channel slit for reflectance calculations. The proposed system can deliver better-fit errors compared with a HAL/DEUT light source using two methods: curve fitting and interference interval. By enabling the curve fitting method, the lowest root mean squared error (RMSE) obtained for the best combination of components was 0.022 and the lowest normalised mean squared error (MSE) was 0.054. The interference interval method showed an error of 0.09 when comparing the measured with the expected modelled value. The proof of concept in this research work enables the expansion of multi-sensor arrays for thin film thickness measurements and the potential application in moving environments.

8.
Mol Cell ; 83(11): 1810-1826.e8, 2023 06 01.
Artigo em Inglês | MEDLINE | ID: mdl-37267903

RESUMO

Microprocessor (MP), DROSHA-DGCR8, processes primary miRNA transcripts (pri-miRNAs) to initiate miRNA biogenesis. The canonical cleavage mechanism of MP has been extensively investigated and comprehensively validated for two decades. However, this canonical mechanism cannot account for the processing of certain pri-miRNAs in animals. In this study, by conducting high-throughput pri-miRNA cleavage assays for approximately 260,000 pri-miRNA sequences, we discovered and comprehensively characterized a noncanonical cleavage mechanism of MP. This noncanonical mechanism does not need several RNA and protein elements essential for the canonical mechanism; instead, it utilizes previously unrecognized DROSHA dsRNA recognition sites (DRESs). Interestingly, the noncanonical mechanism is conserved across animals and plays a particularly significant role in C. elegans. Our established noncanonical mechanism elucidates MP cleavage in numerous RNA substrates unaccounted for by the canonical mechanism in animals. This study suggests a broader substrate repertoire of animal MPs and an expanded regulatory landscape for miRNA biogenesis.


Assuntos
MicroRNAs , Animais , MicroRNAs/metabolismo , Caenorhabditis elegans/genética , Caenorhabditis elegans/metabolismo , Proteínas de Ligação a RNA/metabolismo , Ribonuclease III/metabolismo , RNA de Cadeia Dupla , Processamento Pós-Transcricional do RNA
9.
Clin Biomech (Bristol, Avon) ; 106: 105988, 2023 06.
Artigo em Inglês | MEDLINE | ID: mdl-37230008

RESUMO

BACKGROUND: Biomechanical gait analyses are typically performed in laboratory settings, and are associated with limitations due to space, marker placement, and tasks that are not representative of the real-world usage of lower limb prostheses. Therefore, the purpose of this study was to investigate the possibility of accurately measuring gait parameters using embedded sensors in a microprocessor-controlled knee joint. METHODS: Ten participants were recruited for this study and equipped with a Genium X3 prosthetic knee joint. They performed level walking, stair/ramp descent, and ascent. During these tasks, kinematics and kinetics (sagittal knee and thigh segment angle, and knee moment) were recorded using an optical motion capture system and force plates (gold standard), as well as the prosthesis-embedded sensors. Root mean square errors, relative errors, correlation coefficients, and discrete outcome variables of clinical relevance were calculated and compared between the gold standard and the embedded sensors. FINDINGS: The average root mean square errors were found to be 0.6°, 5.3°, and 0.08 Nm/kg, for the knee angle, thigh angle, and knee moment, respectively. The average relative errors were 0.75% for the knee angle, 11.67% for the thigh angle, and 9.66%, for the knee moment. The discrete outcome variables showed small but significant differences between the two measurement systems for a number of tasks (higher differences only at the thigh). INTERPRETATION: The findings highlight the potential of prosthesis-embedded sensors to accurately measure gait parameters across a wide range of tasks. This paves the way for assessing prosthesis performance in realistic environments outside the lab.


Assuntos
Membros Artificiais , Humanos , Análise da Marcha , Estudos de Viabilidade , Marcha , Amputação Cirúrgica , Caminhada , Articulação do Joelho/cirurgia , Joelho , Fenômenos Biomecânicos
10.
Bioengineering (Basel) ; 10(5)2023 May 19.
Artigo em Inglês | MEDLINE | ID: mdl-37237684

RESUMO

Hip-knee-ankle-foot prostheses (HKAF) are full lower-limb devices for people with hip amputations that enable individuals to regain their mobility and move freely within their chosen environment. HKAFs typically have high rejection rates among users, as well as gait asymmetry, increased trunk anterior-posterior lean, and increased pelvic tilt. A novel integrated hip-knee (IHK) unit was designed and evaluated to address the limitations of existing solutions. This IHK combines powered hip and microprocessor-controlled knee joints into one structure, with shared electronics, sensors, and batteries. The unit is also adjustable to user leg length and alignment. ISO-10328:2016 standard mechanical proof load testing demonstrated acceptable structural safety and rigidity. Successful functional testing involved three able-bodied participants walking with the IHK in a hip prosthesis simulator. Hip, knee, and pelvic tilt angles were recorded and stride parameters were analyzed from video recordings. Participants were able to walk independently using the IHK and data showed that participants used different walking strategies. Future development of the thigh unit should include completion of a synergistic gait control system, improved battery-holding mechanism, and amputee user testing.

11.
Disabil Rehabil ; : 1-7, 2023 May 18.
Artigo em Inglês | MEDLINE | ID: mdl-37203194

RESUMO

PURPOSE: As United States healthcare transitions from traditional fee-for-service models to value-based care, there is increased need to demonstrate quality care through clinical outcomes. Therefore, the purpose of this study was to create equations to calculate an expected mobility score for lower limb prosthesis users specific to their age, etiology, and amputation level to provide benchmarks to qualify good outcomes. MATERIALS AND METHODS: A retrospective cross-sectional analysis of outcomes collected during clinical care was performed. Individuals were grouped based on amputation level (unilateral above-knee (AKA) or below-knee (BKA)) and etiology (trauma or diabetes/dysvascular (DV)). The mean mobility score (PLUS-M® T-score) for each year of age was calculated. AKAs were further stratified into having a microprocessor knee (MPK) or non-microprocessor (nMPK) for secondary analysis. RESULTS: As expected, average prosthetic mobility declined with age. Overall, BKAs had higher PLUS-M T-scores compared to AKAs and trauma etiologies had higher scores compared to DV. For AKAs, those with a MPK had higher T-scores compared to those with a nMPK. CONCLUSIONS: Results from this study provide average mobility for adult patients across every year of life. This can be leveraged to create a mobility adjustment factor to qualify good outcomes in lower limb prosthetic care.IMPLICATIONS FOR REHABILITATIONNormative values of mobility are needed to qualify good outcomes in prosthetic care as healthcare shifts towards value-based care.Understanding where an individual is relative to others with similar characteristics (e.g., age, etiology, gender, amputation level, and device type) can provide clinicians with better benchmarks for individual goal-setting.The ability to generate predicted mobility scores specific to each individual can create a mobility adjustment factor to better qualify good outcomes.

12.
Sensors (Basel) ; 23(7)2023 Mar 24.
Artigo em Inglês | MEDLINE | ID: mdl-37050475

RESUMO

In the process of ship motion control system design, it is necessary to take into account the impact of environmental disturbances such as winds, waves and sea currents. The commonly used representatives of wave influences in this area are the unidirectional wave power spectral density functions describing sea waves of different form: long-crested, fully developed waves, developing wind waves or multi-modal waves (e.g., with swell). The existing standard PSD models describe the surge of open sea or ocean. However, they are inadequate in the case of control system testing of scale ship models for sailing in open water areas such as lakes or test pools. This paper presents a study of wind-generated wave PSD estimations for a small lake used as a test area for free-running scale ships. The publication provides a brief overview of the wave spectral density functions commonly used for control system design. A measurement instrument using the idea of a water-induced variable capacitance that works synchronously with the wind sensors is also described. The process of collected data analysis is presented. As a result of the study, a series of empirical spectral density functions of lake waves for different wind speeds are obtained. They correspond to the rescaled, two-parametric ITTC model.

13.
Plants (Basel) ; 12(2)2023 Jan 11.
Artigo em Inglês | MEDLINE | ID: mdl-36679055

RESUMO

MicroRNAs are small RNAs, 20-22 nt long, the main role of which is to downregulate gene expression at the level of mRNAs. MiRNAs are fundamental regulators of plant growth and development in response to internal signals as well as in response to abiotic and biotic factors. Therefore, the deficiency or excess of individual miRNAs is detrimental to particular aspects of a plant's life. In consequence, the miRNA levels must be appropriately adjusted. To obtain proper expression of each miRNA, their biogenesis is controlled at multiple regulatory layers. Here, we addressed processes discovered to influence miRNA steady-state levels, such as MIR transcription, co-transcriptional pri-miRNA processing (including splicing, polyadenylation, microprocessor assembly and activity) and miRNA-encoded peptides synthesis. MiRNA stability, RISC formation and miRNA export out of the nucleus and out of the plant cell also define the levels of miRNAs in various plant tissues. Moreover, we show the evolutionary conservation of miRNA biogenesis core proteins across the plant kingdom.

14.
EMBO Rep ; 24(1): e55037, 2023 01 09.
Artigo em Inglês | MEDLINE | ID: mdl-36373807

RESUMO

FYVE domain protein required for endosomal sorting 1 (FREE1), originally identified as a plant-specific component of the endosomal sorting complex required for transport (ESCRT) machinery, plays diverse roles either in endosomal sorting in the cytoplasm or in transcriptional regulation of abscisic acid signaling in the nucleus. However, to date, a role for FREE1 or other ESCRT components in the regulation of plant miRNA biology has not been discovered. Here, we demonstrate a nuclear function of FREE1 as a cofactor in miRNA biogenesis in plants. FREE1 directly interacts with the plant core microprocessor component CPL1 in nuclear bodies and disturbs the association between HYL1, SE and CPL1. Inactivation of FREE1 in the nucleus increases the binding affinity between HYL1, SE, and CPL1 and causes a transition of HYL1 from the inactive hyperphosphorylated version to the active hypophosphorylated form, thereby promoting miRNA biogenesis. Our results suggest that FREE1 has evolved as a negative regulator of miRNA biogenesis and provides evidence for a link between FYVE domain-containing proteins and miRNA biogenesis in plants.


Assuntos
Proteínas de Arabidopsis , Arabidopsis , MicroRNAs , Proteínas de Arabidopsis/genética , Proteínas de Arabidopsis/metabolismo , Proteínas de Plantas/genética , Arabidopsis/genética , Arabidopsis/metabolismo , MicroRNAs/genética , MicroRNAs/metabolismo , Complexos Endossomais de Distribuição Requeridos para Transporte/metabolismo , Regulação da Expressão Gênica de Plantas , Proteínas de Ligação a RNA/genética , Proteínas de Ligação a RNA/metabolismo , Fosfoproteínas Fosfatases/genética , Fosfoproteínas Fosfatases/metabolismo , Fatores de Transcrição/metabolismo , Proteínas de Transporte Vesicular/metabolismo
15.
FEBS J ; 290(3): 688-691, 2023 02.
Artigo em Inglês | MEDLINE | ID: mdl-36334004

RESUMO

In metazoans, most proteins have pleiotropic cellular functions and have the ability to interact with several factors to accomplish these different functions. This is the case of eukaryotic ERH proteins, a family of homodimeric proteins involved in DNA replication and cell cycle control as well as in gene silencing by contributing either to the biogenesis of small interference RNAs (miRNAs, piRNAs) or to the recruitment of RNA decay machineries. Very recently, several crystal structures describing complexes formed by eukaryotic ERH proteins and several small peptides from various partners have highlighted the existence of different binding sites on the surface of ERH proteins. In this issue of The FEBS Journal, Wang et al. present the crystal structure of the complex formed between the human ERH protein and a short peptide of the CIZ1 protein, one of its partners. Altogether, this information will be particularly important for future studies aimed at dissecting the different biological functions governed by this family of highly conserved proteins. Comment on: https://doi.org/10.1111/febs.16611.


Assuntos
Proteínas de Ciclo Celular , Inativação Gênica , Fatores de Transcrição , Humanos , Divisão Celular , Replicação do DNA , MicroRNAs , Proteínas Nucleares/genética , RNA Interferente Pequeno/genética , Fatores de Transcrição/metabolismo , Proteínas de Ciclo Celular/metabolismo
16.
Front Sports Act Living ; 5: 1304141, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-38239891

RESUMO

How to achieve stable locomotion while overcoming various instabilities is an ongoing research topic. One essential factor for achieving a stable gait is controlling the center of body mass (CoM). The CoM yields more instability in the mediolateral direction. Examining speed-dependent modulations of the CoM trajectories in the frontal plane can provide insight into control policies for achieving stable locomotion. Although these modulations have been studied while assuming symmetric CoM trajectories, this assumption is generally incorrect. For example, amputee subjects demonstrate asymmetric CoM trajectories. Here, we investigated speed-dependent modulations of asymmetric CoM trajectories in above-knee amputee subjects using Fourier series expansion. Despite the asymmetric CoM trajectories in amputee subjects, the framework of Fourier series expansion clarified that amputee subjects showed the same speed-dependent modulations as non-amputee subjects whose CoM trajectories were symmetric. Specifically, CoM trajectories became narrower in the mediolateral direction and broader in the superoinferior direction as walking speed increased. The speed-dependent modulations of CoM trajectories had a functional role in improving dynamic stability, and faster walking speeds provided greater dynamic stability on both prosthetic and non-prosthetic sides. Although the asymmetry of foot contact duration and CoM trajectory decreased as walking speed increased, step width and the asymmetry of dynamic stability between prosthetic and non-prosthetic sides remained constant across the walking speed, which corresponded to the predictions by our framework. These findings could offer a better strategy for achieving stable walking for amputee subjects.

17.
Sensors (Basel) ; 24(1)2023 Dec 30.
Artigo em Inglês | MEDLINE | ID: mdl-38203079

RESUMO

Particle detector systems require data acquisition systems (DAQs) as their back-end. This paper presents a new edge-computing DAQ that is capable of handling multiple pixel detectors simultaneously and was designed for particle-tracking experiments. The system was designed for the ROC4SENS readout chip, but its control logic can be adapted for other pixel detectors. The DAQ was based on a system-on-chip FPGA (SoC FPGA), which includes an embedded microprocessor running a fully functional Linux system. An application using a client-server architecture was developed to facilitate remote control and data visualization. The comprehensive DAQ is very compact, thus reducing the typical hardware load in particle tracking experiments, especially during the obligatory characterization of particle telescopes.

18.
Int J Mol Sci ; 23(23)2022 Nov 26.
Artigo em Inglês | MEDLINE | ID: mdl-36499151

RESUMO

DGCR8 emerged recently as miRNAs biogenesis pathway protein with a highlighted role in thyroid disease. This study aimed to characterize this miRNA biogenesis component, in particular the p.(E518K) mutation and DGCR8 expression in a series of thyroid lesions. The series of thyroid lesions was genotyped for the c.1552G>A p.(E518K) mutation. When frozen tissue was available, DGCR8 mRNA expression was analysed by qPCR. Formalin-fixed paraffin-embedded tissues were studied for DGCR8 immunoexpression. We present for the first time the p.(E518K) mutation in a case of poorly differentiated thyroid carcinoma and present the deregulation of DGCR8 expression at mRNA level in follicular-patterned tumours. The obtained data solidify DGCR8 as another important player of miRNA-related gene mutations in thyroid tumorigenesis, particularly in follicular-patterned thyroid tumours.


Assuntos
MicroRNAs , Neoplasias , Humanos , Proteínas de Ligação a RNA/genética , Proteínas de Ligação a RNA/metabolismo , MicroRNAs/genética , MicroRNAs/metabolismo , Glândula Tireoide/metabolismo , RNA Mensageiro , Mutação
19.
Sensors (Basel) ; 22(21)2022 Nov 05.
Artigo em Inglês | MEDLINE | ID: mdl-36366229

RESUMO

Extreme weather events cause stream overflow and lead to urban inundation. In this study, a decentralized flood monitoring system is proposed to provide water level predictions in streams three hours ahead. The customized sensor in the system measures the water levels and implements edge computing to produce future water levels. It is very different from traditional centralized monitoring systems and considered an innovation in the field. In edge computing, traditional physics-based algorithms are not computationally efficient if microprocessors are used in sensors. A correlation analysis was performed to identify key factors that influence the variations in the water level forecasts. For example, the second-order difference in the water level is considered to represent the acceleration or deacceleration of a water level rise. According to different input factors, three artificial neural network (ANN) models were developed. Four streams or canals were selected to test and evaluate the performance of the models. One case was used for model training and testing, and the others were used for model validation. The results demonstrated that the ANN model with the second-order water level difference as an input factor outperformed the other ANN models in terms of RMSE. The customized microprocessor-based sensor with an embedded ANN algorithm can be adopted to improve edge computing capabilities and support emergency response and decision making.


Assuntos
Redes Neurais de Computação , Água , Algoritmos , Previsões
20.
Noncoding RNA ; 8(5)2022 Sep 15.
Artigo em Inglês | MEDLINE | ID: mdl-36136852

RESUMO

Long non-coding RNAs (lncRNAs) have emerged as key regulators in a wide range of biological processes. Here, we identified a mouse miRNA-host gene lncRNA (lnc-Nr6a1) upregulated early during epithelial-to-mesenchymal transition (EMT). We show that when lncRNA is processed, it gives rise to two abundant polyadenylated isoforms, lnc-Nr6a1-1 and lnc-Nr6a1-2, and a longer non-polyadenylated microprocessor-driven lnc-pri-miRNA containing clustered pre-miR-181a2 and pre-miR-181b2 hairpins. Ectopic expression of the lnc-Nr6a1-1 or lnc-Nr6a1-2 isoform enhanced cell migration and the invasive capacity of the cells, whereas the expression of the isoforms and miR-181a2 and miR-181b2 conferred anoikis resistance. Lnc-Nr6a1 gene deletion resulted in cells with lower adhesion capacity and reduced glycolytic metabolism, which are restored by lnc-Nr6a1-1 isoform expression. We performed identification of direct RNA interacting proteins (iDRIP) to identify proteins interacting directly with the lnc-Nr6a1-1 isoform. We defined a network of interacting proteins, including glycolytic enzymes, desmosome proteins and chaperone proteins; and we demonstrated that the lnc-Nr6a1-1 isoform directly binds and acts as a scaffold molecule for the assembly of ENO1, ALDOA, GAPDH, and PKM glycolytic enzymes, along with LDHA, supporting substrate channeling for efficient glycolysis. Our results unveil a role of Lnc-Nr6a1 as a multifunctional lncRNA acting as a backbone for multiprotein complex formation and primary microRNAs.

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