RESUMO
Sweetpotato, Ipomoea batatas (L.) Lam., is an important and widely grown crop, yet its production is affected severely by biotic and abiotic stresses. The nucleotide binding site (NBS)-encoding genes have been shown to improve stress tolerance in several plant species. However, the characterization of NBS-encoding genes in sweetpotato is not well-documented to date. In this study, a comprehensive analysis of NBS-encoding genes has been conducted on this species by using bioinformatics and molecular biology methods. A total of 315 NBS-encoding genes were identified, and 260 of them contained all essential conserved domains while 55 genes were truncated. Based on domain architectures, the 260 NBS-encoding genes were grouped into 6 distinct categories. Phylogenetic analysis grouped these genes into 3 classes: TIR, CC (I), and CC (II). Chromosome location analysis revealed that the distribution of NBS-encoding genes in chromosomes was uneven, with a number ranging from 1 to 34. Multiple stress-related regulatory elements were detected in the promoters, and the NBS-encoding genes' expression profiles under biotic and abiotic stresses were obtained. According to the bioinformatics analysis, 9 genes were selected for RT-qPCR analysis. The results revealed that IbNBS75, IbNBS219, and IbNBS256 respond to stem nematode infection; Ib-NBS240, IbNBS90, and IbNBS80 respond to cold stress, while IbNBS208, IbNBS71, and IbNBS159 respond to 30% PEG treatment. We hope these results will provide new insights into the evolution of NBS-encoding genes in the sweetpotato genome and contribute to the molecular breeding of sweetpotato in the future.
Assuntos
Adaptação Fisiológica/genética , Cromossomos de Plantas , Regulação da Expressão Gênica de Plantas , Genes de Plantas , Ipomoea batatas/genética , Adaptação Fisiológica/imunologia , Animais , Sequência de Bases , Sítios de Ligação , Mapeamento Cromossômico/métodos , Biologia Computacional/métodos , Ipomoea batatas/classificação , Ipomoea batatas/imunologia , Ipomoea batatas/parasitologia , Anotação de Sequência Molecular , Nucleotídeos/genética , Nucleotídeos/metabolismo , Filogenia , Doenças das Plantas/genética , Doenças das Plantas/imunologia , Doenças das Plantas/parasitologia , Imunidade Vegetal/genética , Estresse Fisiológico , Tylenchoidea/crescimento & desenvolvimento , Tylenchoidea/patogenicidadeRESUMO
The endophytic Bacillus amyloliquefaciens YTB1407 was previously reported to promote the growth of sweet potato (Ipomoea batatas cv. Yanshu 25). Here, we demonstrate in both in vitro and pot trial assays that pre-treatment with YTB1407 suspension could enhance resistance against root rot disease and black rot disease, caused by Fusarium solani Mart. Sacc. f. sp. batatas McClure and Ceratocystis fimbriata Ell. & Halst on sweet potato, respectively. When seedlings were infected with fungal pathogens at 10 days post irrigation, pre-treatment with YTB1407 suspension decreased these pathogens and YTB1407 bacterial biomass in sweet potato roots. The pre-treatment activated the expression of salicylic acid (SA)-responsive PR-1 gene, raised SA content, and reduced hydrogen peroxide (H2O2) in the host to resist F. solani, while it enhanced the expression levels of SA-responsive NPR1 and PR1 genes and increased SA content to resist C. fimbriata. The disease resistance control effect initiated by pre-treatment with YTB1407 for root rot pathogen (F. solani) was better than for black rot pathogen (C. fimbriata). The results indicated that Bacillus amyloliquefaciens YTB1407 played a pivotal role in enhancing resistance to two fungi pathogens in sweet potato, through production of some antifungal metabolites to decrease infection in the early stage as well as induction of SA-dependent systemic resistance.
Assuntos
Bacillus amyloliquefaciens/fisiologia , Resistência à Doença , Fusarium/fisiologia , Peróxido de Hidrogênio/metabolismo , Ipomoea batatas/microbiologia , Doenças das Plantas/microbiologia , Antifúngicos/metabolismo , Endófitos , Ipomoea batatas/imunologia , Doenças das Plantas/imunologia , Raízes de Plantas/imunologia , Raízes de Plantas/microbiologia , Ácido Salicílico/metabolismo , Plântula/imunologia , Plântula/microbiologiaRESUMO
Black rot, caused by Ceratocystis fimbriata, is a destructive disease of sweet potatoes (Ipomoea batatas). In this study, a novel chitinase (IbChiA) was screened from sweet potatoes, which showed a remarkably higher expression level in resistant varieties than in susceptible ones after inoculation with C. fimbriata. Sequence analysis indicated that IbChiA belongs to family 19 class II extracellular chitinase with a MW of 26.3 kDa and pI of 5.96. Recombinant IbChiA, produced by Pichia pastoris, displayed antifungal activity and stability. IbChiA could restrain the mycelium extension of C. fimbriata. FDA/PI double staining combined with transmission electron microscopy observation revealed the remarkable fungicidal effect of IbChiA on the conidia of C. fimbriata. The disease symptoms on the surface of slices and tuberous roots of sweet potatoes were significantly reduced after treatment with IbChiA. These results indicated that IbChiA could be used as a potential biofungicide to replace chemical fungicides.
Assuntos
Quitinases/imunologia , Ipomoea batatas/enzimologia , Ipomoea batatas/imunologia , Doenças das Plantas/microbiologia , Proteínas de Plantas/imunologia , Sequência de Aminoácidos , Ceratocystis/crescimento & desenvolvimento , Ceratocystis/fisiologia , Quitinases/química , Quitinases/genética , Ipomoea batatas/química , Doenças das Plantas/imunologia , Proteínas de Plantas/química , Proteínas de Plantas/genética , Alinhamento de SequênciaRESUMO
BACKGROUND: Sweetpotato root rot is a devastating disease caused by Fusarium solani that seriously endangers the yield of sweetpotato in China. Although there is currently no effective method to control the disease, breeding of resistant varieties is the most effective and economic option. Moreover, quantitative trait locus (QTL) associated with resistance to root rot have not yet been reported, and the biological mechanisms of resistance remain unclear in sweetpotato. Thus, increasing our knowledge about the mechanism of disease resistance and identifying resistance loci will assist in the development of disease resistance breeding. RESULTS: In this study, we constructed genetic linkage maps of sweetpotato using a mapping population consisting of 300 individuals derived from a cross between Jizishu 1 and Longshu 9 by simple sequence repeat (SSR) markers, and mapped seven QTLs for resistance to root rot. In total, 484 and 573 polymorphic SSR markers were grouped into 90 linkage groups for Jizishu 1 and Longshu 9, respectively. The total map distance for Jizishu 1 was 3974.24 cM, with an average marker distance of 8.23 cM. The total map distance for Longshu 9 was 5163.35 cM, with an average marker distance of 9.01 cM. Five QTLs (qRRM_1, qRRM_2, qRRM_3, qRRM_4, and qRRM_5) were located in five linkage groups of Jizishu 1 map explaining 52.6-57.0% of the variation. Two QTLs (qRRF_1 and qRRF_2) were mapped on two linkage groups of Longshu 9 explaining 57.6 and 53.6% of the variation, respectively. Furthermore, 71.4% of the QTLs positively affected the variation. Three of the seven QTLs, qRRM_3, qRRF_1, and qRRF_2, were colocalized with markers IES43-5mt, IES68-6 fs**, and IES108-1 fs, respectively. CONCLUSIONS: To our knowledge, this is the first report on the construction of a genetic linkage map for purple sweetpotato (Jizishu 1) and the identification of QTLs associated with resistance to root rot in sweetpotato using SSR markers. These QTLs will have practical significance for the fine mapping of root rot resistance genes and play an important role in sweetpotato marker-assisted breeding.
Assuntos
Resistência à Doença/genética , Ipomoea batatas/genética , Doenças das Plantas/genética , Locos de Características Quantitativas , Mapeamento Cromossômico , Fusarium , Ligação Genética , Variação Genética , Genoma de Planta , Ipomoea batatas/imunologia , Repetições de Microssatélites/genética , Doenças das Plantas/imunologia , Raízes de Plantas/genética , Raízes de Plantas/imunologia , Sitios de Sequências RotuladasRESUMO
Cultivated sweet potato (Ipomoea batatas) is an important source of food for both humans and domesticated animals. Here, we show that the B-box (BBX) family transcription factor IbBBX24 regulates the jasmonic acid (JA) pathway in sweet potato. When IbBBX24 was overexpressed in sweet potato, JA accumulation increased, whereas silencing this gene decreased JA levels. RNA sequencing analysis revealed that IbBBX24 modulates the expression of genes involved in the JA pathway. IbBBX24 regulates JA responses by antagonizing the JA signaling repressor IbJAZ10, which relieves IbJAZ10's repression of IbMYC2, a JA signaling activator. IbBBX24 binds to the IbJAZ10 promoter and activates its transcription, whereas it represses the transcription of IbMYC2 The interaction between IbBBX24 and IbJAZ10 interferes with IbJAZ10's repression of IbMYC2, thereby promoting the transcriptional activity of IbMYC2. Overexpressing IbBBX24 significantly increased Fusarium wilt disease resistance, suggesting that JA responses play a crucial role in regulating Fusarium wilt resistance in sweet potato. Finally, overexpressing IbBBX24 led to increased yields in sweet potato. Together, our findings indicate that IbBBX24 plays a pivotal role in regulating JA biosynthesis and signaling and increasing Fusarium wilt resistance and yield in sweet potato, thus providing a candidate gene for developing elite crop varieties with enhanced pathogen resistance but without yield penalty.
Assuntos
Ciclopentanos/metabolismo , Resistência à Doença , Fusarium/fisiologia , Ipomoea batatas/imunologia , Ipomoea batatas/microbiologia , Oxilipinas/metabolismo , Doenças das Plantas/microbiologia , Proteínas de Plantas/metabolismo , Acetatos/farmacologia , Sequência de Bases , Ciclopentanos/farmacologia , DNA de Plantas/metabolismo , Regulação da Expressão Gênica de Plantas/efeitos dos fármacos , Genoma de Planta , Ipomoea batatas/genética , Ipomoea batatas/crescimento & desenvolvimento , Modelos Biológicos , Oxilipinas/farmacologia , Plantas Geneticamente Modificadas , Regiões Promotoras Genéticas/genética , Ligação Proteica/efeitos dos fármacos , Nicotiana/genética , Nicotiana/microbiologia , Transcrição Gênica/efeitos dos fármacosRESUMO
Biocontrol offers a promising alternative to synthetic fungicides for the control of a variety of pre- and post-harvest diseases of crops. Black rot, which is caused by the pathogenic fungus Ceratocytis fimbriata, is the most destructive post-harvest disease of sweet potato, but little is currently known about potential biocontrol agents for this fungus. Here, we isolated several microorganisms from the tuberous roots and shoots of field-grown sweet potato plants, and analyzed their ribosomal RNA gene sequences. The microorganisms belonging to the genus Pantoea made up a major portion of the microbes residing within the sweet potato plants, and fluorescence microscopy showed these microbes colonized the intercellular spaces of the vascular tissue in the sweet potato stems. Four P. dispersa strains strongly inhibited C. fimbriata mycelium growth and spore germination, and altered the morphology of the fungal hyphae. The detection of dead C. fimbriata cells using Evans blue staining suggested that these P. dispersa strains have fungicidal rather than fungistatic activity. Furthermore, P. dispersa strains significantly inhibited C. fimbriata growth on the leaves and tuberous roots of a susceptible sweet potato cultivar ("Yulmi"). These findings suggest that P. dispersa strains could inhibit black rot in sweet potato plants, highlighting their potential as biocontrol agents.
Assuntos
Ascomicetos/crescimento & desenvolvimento , Ipomoea batatas/imunologia , Pantoea/fisiologia , Controle Biológico de Vetores , Doenças das Plantas/prevenção & controle , Folhas de Planta/imunologia , Raízes de Plantas/imunologia , Resistência à Doença , Ipomoea batatas/microbiologia , Doenças das Plantas/imunologia , Doenças das Plantas/microbiologia , Folhas de Planta/microbiologia , Raízes de Plantas/microbiologiaRESUMO
MAIN CONCLUSION: Transcriptome analysis was performed on the roots of susceptible and resistant sweetpotato cultivars infected with the major root-knot nematode species Meloidogyne incognita. In addition, we identified a transcription factor-mediated defense signaling pathway that might function in sweetpotato-nematode interactions. Root-knot nematodes (RKNs, Meloidogyne spp.) are important sedentary endoparasites of many agricultural crop plants that significantly reduce production in field-grown sweetpotato. To date, no studies involving gene expression profiling in sweetpotato during RKN infection have been reported. Therefore, in the present study, transcriptome analysis was performed on the roots of susceptible (cv. Yulmi) and resistant (cv. Juhwangmi) sweetpotato cultivars infected with the widespread, major RKN species Meloidogyne incognita. Using the Illumina HiSeq 2000 platform, we generated 455,295,628 pair-end reads from the fibrous roots of both cultivars, which were assembled into 74,733 transcripts. A number of common and unique genes were differentially expressed in susceptible vs. resistant cultivars as a result of RKN infection. We assigned the differentially expressed genes into gene ontology categories and used MapMan annotation to predict their functional roles and associated biological processes. The candidate genes including hormonal signaling-related transcription factors and pathogenesis-related genes that could contribute to protection against RKN infection in sweetpotato roots were identified and sweetpotato-nematode interactions involved in resistance are discussed.
Assuntos
Resistência à Doença , Ipomoea batatas/parasitologia , Doenças das Plantas/parasitologia , Tylenchoidea , Animais , Resistência à Doença/genética , Perfilação da Expressão Gênica , Ipomoea batatas/genética , Ipomoea batatas/imunologia , Doenças das Plantas/imunologia , Raízes de Plantas/parasitologia , Reação em Cadeia da Polimerase em Tempo Real , Análise de Sequência de DNA , Transcriptoma/genéticaAssuntos
Alérgenos/imunologia , Hipersensibilidade Alimentar/diagnóstico , Hipersensibilidade Alimentar/imunologia , Alimentos/efeitos adversos , Ipomoea batatas/imunologia , Urticária/diagnóstico , Urticária/imunologia , Adulto , Feminino , Hipersensibilidade Alimentar/metabolismo , Liberação de Histamina , Humanos , Imunoglobulina E/imunologia , Urticária/metabolismoRESUMO
BACKGROUND: The potential of 1-methylcyclopropene (1-MCP) to maintain postharvest storage of sweet potato was studied. In two separate experiments, the orange-fleshed sweet potato cv. Covington was treated with 1-MCP (1.0 µL L-1 , 24 h) and roots stored at 15 °C. During storage, samples were evaluated for the respiration rate, sprout growth, weight loss, incidence of decay and changes in dry matter. The roots were further assayed for the temporal changes in individual non-structural carbohydrates and phenolic compounds in the skin and flesh tissues of the proximal (stem end), middle and distal (root end) regions. RESULTS: 1-MCP treatment reduced root weight loss and decay but respiration rate and non-structural carbohydrates were not affected. No sprouting was recorded irrespective of the treatment. 1-MCP transiently suppressed the accumulation of individual phenolic compounds, especially in the middle and distal segments. This accentuated the proximal dominance of phenolic compounds. Isochlorogenic acid A and chlorogenic acid were the dominant phenolics in the skin and flesh tissues, respectively. CONCLUSION: 1-MCP treatment may have an anti-decay effect and reduce weight loss. Therefore, storage trials that involve the use of continuous ethylene supplementation to inhibit sprout growth may be combined with 1-MCP to alleviate ethylene-induced weight loss and decay in sweet potato. © 2018 Society of Chemical Industry.
Assuntos
Ciclopropanos/farmacologia , Ipomoea batatas/efeitos dos fármacos , Resistência à Doença , Armazenamento de Alimentos , Ipomoea batatas/química , Ipomoea batatas/crescimento & desenvolvimento , Ipomoea batatas/imunologia , Fenóis/análise , Extratos Vegetais/análise , Raízes de Plantas/química , Raízes de Plantas/efeitos dos fármacos , Raízes de Plantas/crescimento & desenvolvimento , Raízes de Plantas/imunologia , Caules de Planta/efeitos dos fármacos , Caules de Planta/crescimento & desenvolvimento , Caules de Planta/imunologiaRESUMO
Polymorphonuclear neutrophils (PMNn) are the pivotal mediators of phagocytosis. In addition to neutropenia, impaired neutrophilic function is associated with pathological conditions and immuno-deficiencies. Henceforth, Immuno-stimulatory strategies targeting neutrophilic function are indeed powerful tools in combating obstinate infections. In appreciation towards the usefulness of herbal medicines in therapeutic scenario, the present study was carried out to analyse the immuno-stimulatory effect of Cuscuta epithymum, Ipomoea batata and Euphorbia hirta using in-vitro and in-vivo rodent experimental models. Throughout the experimentation, phagocytosis was studied and expressed as phagocytotic index and percentage phagocytosis. Different extracts of these plants were initially screened for their potency to induce phagocytosis in PMNn and the methanolic fractions, which are effective, were considered for further experimentation.The phagocytosis stimulation by the methanolic extracts was compared with the standard Granulocyte Macrophage - Colony Stimulating Factor (GM-CSF) at a dose of 65ng/ml. Immunoblotting analysis shown that the methanolic extracts induce the phosphorylation of Syk which in turn phosphorylates GDP-RAC-1, hinting the possible mechanism of action. Following these in vitro investigations, the potency of methanolic extracts was assessed using rat model by performing carbon clearance assay, Delayed Type Hypersensitivity and antibody titre.The phosphorylation status of Syk and GDP-RAC-1 was also assessed in the edematous fluid collected from the right hind paw. In vivo findings were in agreement with the in vitro findings by presenting an improved immune response and increased phosphorylation of Syk and GDP-RAC-1. Conclusively, this study provides the initial insights into the therapeutic implications of the tropical plants in inducing phagocytosis.
Assuntos
Cuscuta/imunologia , Euphorbia/imunologia , Guanosina Difosfato/metabolismo , Ipomoea batatas/imunologia , Extratos Vegetais/imunologia , Quinase Syk/metabolismo , Proteínas rac1 de Ligação ao GTP/metabolismo , Adolescente , Adulto , Animais , Humanos , Camundongos , Neutrófilos/efeitos dos fármacos , Neutrófilos/imunologia , Fagocitose/efeitos dos fármacos , Fagocitose/imunologia , Fosforilação/efeitos dos fármacos , Fosforilação/imunologia , Plantas Medicinais/imunologia , Ratos , Ratos Wistar , Adulto JovemRESUMO
Rhodococcus species have become increasingly important owing to their ability to degrade a wide range of toxic chemicals and produce bioactive compounds. Here, we report isolation of the Rhodococcus sp. KB6, which is a new leaf-inhabiting endophytic bacterium that suppresses black rot disease in sweet potato leaves. We determined the 7.0 Mb draft genome sequence of KB6 and have predicted 19 biosynthetic gene clusters for secondary metabolites, including heterobactins, which are a new class of siderophores. Notably, we showed the first internal colonization of host plants with Rhodococcus sp. KB6 and discuss its potential as a biocontrol agent for sustainable agriculture.
Assuntos
Ascomicetos/fisiologia , Endófitos/metabolismo , Ipomoea batatas/microbiologia , Doenças das Plantas/microbiologia , Folhas de Planta/microbiologia , Rhodococcus/metabolismo , Ascomicetos/efeitos dos fármacos , Resistência à Doença , Endófitos/classificação , Endófitos/genética , Endófitos/isolamento & purificação , Genoma Bacteriano , Ipomoea batatas/imunologia , Doenças das Plantas/imunologia , Folhas de Planta/imunologia , Rhodococcus/genética , Rhodococcus/isolamento & purificação , Metabolismo Secundário , Sideróforos/metabolismo , Sideróforos/farmacologiaRESUMO
The immunomodulatory effects of a dietary supplement of purple sweet potato extract (PSPE) in LP-BM5 murine leukemia virus (MuLV)-induced immune-deficient mice were investigated. Mice were divided into six groups: normal control, infected control (LP-BM5 MuLV infection), positive control (LP-BM5 MuLV infection+dietary supplement of red ginseng 300 mg/kg), purple sweet potato water extract (PSPWE) (LP-BM5 MuLV infection+dietary supplement of PSPE 300 mg/kg), PSP10EE (LP-BM5 MuLV infection+dietary supplement of 10% ethanol PSPE 300 mg/kg), and PSP80EE (LP-BM5 MuLV infection+dietary supplement of 80% ethanol PSPE 300 mg/kg). Dietary supplementation began on the day of LP-BM5 MuLV infection and continued for 12 weeks. Dietary supplementation of PSPE inhibited LP-BM5 MuLV-induced splenomegaly and lymphadenopathy and attenuated the suppression of T- and B-cell proliferation and T helper 1/T helper 2 cytokine imbalance in LP-BM5 MuLV-infected mice. Dietary supplement of PSPE increased the activity of the antioxidant enzymes, superoxide dismutase and glutathione peroxidase. The data suggest that PSPE may ameliorate immune dysfunction due to LP-BM5 MuLV infection by modulating antioxidant defense systems.
Assuntos
Antioxidantes/farmacologia , Imunomodulação/efeitos dos fármacos , Ipomoea batatas/química , Ipomoea batatas/imunologia , Vírus da Leucemia Murina , Síndrome de Imunodeficiência Adquirida Murina/dietoterapia , Animais , Antioxidantes/química , Linfócitos B/citologia , Linfócitos B/efeitos dos fármacos , Proliferação de Células/efeitos dos fármacos , Citocinas/análise , Modelos Animais de Doenças , Glutationa Peroxidase/metabolismo , Vírus da Leucemia Murina/patogenicidade , Doenças Linfáticas/dietoterapia , Camundongos , Camundongos Endogâmicos C57BL , Síndrome de Imunodeficiência Adquirida Murina/imunologia , Síndrome de Imunodeficiência Adquirida Murina/patologia , Síndrome de Imunodeficiência Adquirida Murina/virologia , Extratos Vegetais/farmacologia , Preparações de Plantas/química , Esplenomegalia/dietoterapia , Superóxido Dismutase/metabolismo , Linfócitos T/citologia , Linfócitos T/efeitos dos fármacosRESUMO
Stem nematode (Ditylenchus destructor) is one of most serious diseases that limit the productivity and quality of sweet potato (Ipomoea batatas), a root crop with worldwide importance for food security and nutrition improvement. Hence, there is a global demand for developing sweet potato varieties that are resistant to the disease. In this study, we have investigated the interference of stem nematode infectivity by the expression of small interfering RNAs (siRNAs) in transgenic sweet potato that are homologous to the unc-15 gene, which affects the muscle protein paramyosin of the pathogen. The production of double-stranded RNAs and siRNAs in transgenic lines with a single transgene integration event was verified by Northern blot analysis. The expression of unc-15 was reduced dramatically in stem nematodes collected from the inoculated storage roots of transgenic plants, and the infection areas of their storage roots were dramatically smaller than that of wild-type (WT). Compared with the WT, the transgenic plants showed increased yield in the stem nematode-infested field. Our results demonstrate that the expression of siRNAs targeting the unc-15 gene of D. destructor is an effective approach in improving stem nematode resistance in sweet potato, in adjunct with the global integrated pest management programs.
Assuntos
Resistência à Doença , Proteínas de Helminto/genética , Ipomoea batatas/imunologia , Interferência de RNA , Tylenchoidea/genética , Sequência de Aminoácidos , Animais , Biomassa , Southern Blotting , Interações Hospedeiro-Parasita , Ipomoea batatas/genética , Ipomoea batatas/parasitologia , Locomoção/genética , Dados de Sequência Molecular , Controle de Pragas , Fenótipo , Doenças das Plantas , Plantas Geneticamente Modificadas , RNA Interferente Pequeno/metabolismo , Reação em Cadeia da Polimerase em Tempo Real , Reação em Cadeia da Polimerase Via Transcriptase ReversaRESUMO
Sweet potato (Ipomoea batatas) is ranked seventh in global food crop production and is the third most important root crop after potato and cassava. Sweet potatoes are vegetative propagated from vines, root slips (sprouts), or tubers. Therefore, virus diseases can be a major constrain, reducing yields markedly, often more than 50%. The main viruses worldwide are Sweet potato feathery mottle virus (SPFMV) and Sweet potato chlorotic stunt virus (SPCSV). Effects on yields by SPFMV or SPCSV alone are minor, or but in complex infection by the two or other viruses yield losses of 50%. The orthodox way of controlling viruses in vegetative propagated crops is by supplying the growers with virus-tested planting material. High-yielding plants are tested for freedom of viruses by PCR, serology, and grafting to sweet potato virus indicator plants. After this, meristem tips are taken from those plants that reacted negative. The meristems were grown into plants which were kept under insect-proof conditions and away from other sweet potato material for distribution to farmers after another cycle of reproduction.
Assuntos
Produtos Agrícolas/virologia , Ipomoea batatas/virologia , Doenças das Plantas/prevenção & controle , Doenças das Plantas/virologia , Vírus de Plantas/crescimento & desenvolvimento , Produtos Agrícolas/imunologia , Produtos Agrícolas/parasitologia , Vida Livre de Germes , Controle de Insetos/métodos , Ipomoea batatas/imunologia , Ipomoea batatas/parasitologiaRESUMO
Asymptomatic field plants are the normal source of the vine cuttings used as sweetpotato planting material in Africa. Previous and new tests of such East African material, mostly using the very sensitive method of graft inoculation to the indicator plant Ipomoea setosa, showed that a majority tested virus-negative. This was despite their never having undergone any science-based therapy. To investigate how this occurs, in a replicated greenhouse experiment, plants of susceptible cultivars from the USA and Peru and three resistant Ugandan cultivars were graft-inoculated with Sweet potato feathery mottle virus (SPFMV), the commonest virus infecting sweetpotato. When the grafts were established, cuttings were taken, rooted and proved to be infected. The health status of each of these new plants was then followed over a 10-week period using a quantitative polymerase chain reaction assay. Most of the plants of the Ugandan cultivars eventually tested SPFMV-negative whereas those of the USA and Peru seldom did. Furthermore, in subsequent graft-inoculations of scions from the tip, top, middle and base of the vine of every plant to I. setosa plants, again, most of the scions of the Ugandan cultivars tested SPFMV-negative whereas those of the USA and Peru seldom did. These tests demonstrate the phenomenon of reversion in the Ugandan cultivars and can explain how most unprotected Ugandan sweetpotato field plants tested SPFMV-negative.
Assuntos
DNA Viral/genética , Ipomoea batatas/imunologia , Doenças das Plantas/imunologia , Imunidade Vegetal/genética , Folhas de Planta/imunologia , Potyvirus/genética , Cruzamento , Interações Hospedeiro-Patógeno , Ipomoea batatas/genética , Ipomoea batatas/virologia , Doenças das Plantas/genética , Doenças das Plantas/virologia , Folhas de Planta/genética , Folhas de Planta/virologia , Reação em Cadeia da Polimerase , Potyvirus/patogenicidade , UgandaRESUMO
Seven resistant varieties of sweetpotato were compared with three susceptible varieties in field trials and laboratory bioassays and showed that resistance was an active process rather than an escape mechanism, as field resistant varieties also had reduced root damage and oviposition compared with susceptible varieties in the laboratory. Liquid chromatography-mass spectrometry (LC-MS) of root surface and epidermal extracts showed significant variation in the concentration of hexadecyl, heptadecyl, octadecyl, and quinic acid esters of caffeic and coumaric acid, with higher concentrations correlated with resistance. All compounds were synthesized to enable their positive identification. Octadecyl coumarate and octadecyl caffeate applied to the surface of susceptible varieties in laboratory bioassays reduced feeding and oviposition, as observed on roots of resistant varieties, and therefore are implicated in weevil resistance. Segregating populations from breeding programs can use these compounds to identify trait loci for resistance and enable the development of resistant varieties.
Assuntos
Ipomoea batatas/química , Doenças das Plantas/parasitologia , Extratos Vegetais/química , Raízes de Plantas/química , Gorgulhos/fisiologia , Animais , Resistência à Doença , Feminino , Ipomoea batatas/imunologia , Ipomoea batatas/parasitologia , Masculino , Oviposição , Doenças das Plantas/imunologia , Extratos Vegetais/imunologia , Raízes de Plantas/imunologia , Raízes de Plantas/parasitologia , Gorgulhos/crescimento & desenvolvimentoRESUMO
BACKGROUND: Sweet potato (Ipomoea batatas L. [Lam.]) ranks among the top six most important food crops in the world. It is widely grown throughout the world with high and stable yield, strong adaptability, rich nutrient content, and multiple uses. However, little is known about the molecular biology of this important non-model organism due to lack of genomic resources. Hence, studies based on high-throughput sequencing technologies are needed to get a comprehensive and integrated genomic resource and better understanding of gene expression patterns in different tissues and at various developmental stages. METHODOLOGY/PRINCIPAL FINDINGS: Illumina paired-end (PE) RNA-Sequencing was performed, and generated 48.7 million of 75 bp PE reads. These reads were de novo assembled into 128,052 transcripts (≥ 100 bp), which correspond to 41.1 million base pairs, by using a combined assembly strategy. Transcripts were annotated by Blast2GO and 51,763 transcripts got BLASTX hits, in which 39,677 transcripts have GO terms and 14,117 have ECs that are associated with 147 KEGG pathways. Furthermore, transcriptome differences of seven tissues were analyzed by using Illumina digital gene expression (DGE) tag profiling and numerous differentially and specifically expressed transcripts were identified. Moreover, the expression characteristics of genes involved in viral genomes, starch metabolism and potential stress tolerance and insect resistance were also identified. CONCLUSIONS/SIGNIFICANCE: The combined de novo transcriptome assembly strategy can be applied to other organisms whose reference genomes are not available. The data provided here represent the most comprehensive and integrated genomic resources for cloning and identifying genes of interest in sweet potato. Characterization of sweet potato transcriptome provides an effective tool for better understanding the molecular mechanisms of cellular processes including development of leaves and storage roots, tissue-specific gene expression, potential biotic and abiotic stress response in sweet potato.
Assuntos
Perfilação da Expressão Gênica/métodos , Ipomoea batatas/genética , Animais , Composição de Bases , Metabolismo dos Carboidratos , Códon/genética , DNA Complementar/genética , Bases de Dados Genéticas , Marcadores Genéticos/genética , Genômica , Insetos/fisiologia , Ipomoea batatas/crescimento & desenvolvimento , Ipomoea batatas/imunologia , Ipomoea batatas/metabolismo , Repetições de Microssatélites/genética , Anotação de Sequência Molecular , Raízes de Plantas/genética , Raízes de Plantas/crescimento & desenvolvimento , Raízes de Plantas/imunologia , Raízes de Plantas/metabolismo , RNA Mensageiro/genética , RNA Mensageiro/metabolismo , Análise de Sequência de RNA , Estresse Fisiológico/genéticaRESUMO
El cultivo del boniato presenta una gran importancia, ya que se puede emplear en la alimentación humana y animal, así como en la industria; el mismo produce raíces reservantes de gran valor calórico y nutritivo con alto contenido de carbohidratos. Entre las raíces y tubérculos cultivados es el segundo en importancia y representa más del 80% de la producción mundial. El empleo de las técnicas in vitro constituye una poderosa herramienta en la explotación comercial, propiciando el empleo de la micropropagación en diferentes especies. Para desarrollar el presente trabajo se recolectaron raíces tuberosas pertenecientes al clon Inivit B 93-1. Se procedió a la formación de callos potencialmente embriogénicos, para lo cual se emplearon explantes de limbos foliares, desinfectados con hipoclorito de sodio (1%) y sembrados en el medio de cultivo propuesto por Murashige y Skoog (1962), vitaminas MS (10,0 ml/l-1), mioinositol (100 mg/l-1), sacarosa (3%), gelrite (0,2%), 2,4-D (0,25-2,5 mg/l-1) y 6-BAP (0,25-1,0 mg/l-1), el pH fue ajustado a 5,8 ± 0,01 mantenidos en la oscuridad durante treinta días, lográndose los mejores resultados con el uso del 2,4-D (0,50 mg/l-1) y 6-BAP (0,25 mg/l-1), y en los mismos se evaluó la dinámica del crecimiento y se lograron los mejores resultados entre los 28 y 32 días después de la siembra, para lo cual los resultados obtenidos servirán de base a otros estudios y permitirán evaluar, controlar y desarrollar estrategias para la conservación y el uso de los recursos naturales, dando cumplimiento al objetivo referente a estudiar la dinámica del crecimiento en la formación de callos potencialmente embriogénicos en el cultivo del boniato.
The cultivation of the sweet potato presents a great importance, since you can use in the human feeding, animal as well as in the industry, the same one produces roots reservantes of great caloric and nutritious value with high content of carbohydrates. Between the roots and cultivated tubers it is the second in importance and it represents more than 80% of the world production. The employment of the techniques in vitro constitutes a powerful tool in the commercial, propitiated exploitation the employment of the micropropagación in different species. It is for it that you/they were gathered to develop the present work tuberous roots of the clon INIVIT B 93-1. Was realized the formation of callus with embryogenic structures, explantes of leaves were used, disinfected with hipoclorito of sodium (1%) and inoculated in the tissue culture medium proposed by Murashige and Skoog (1962), vitamins MS (10.0 ml/l-1), myoinositol (100 mg/l-1), sucrose (3%), gelryte (0.2%), 2,4-D (0.25-2.5 mg/l-1) and 6-BAP (0.25-1.0 mg/l-1), the pH was adjusted 5.8 ± 0.01 maintained in the darkness during thirty days, being achieved the best results with the use of the 2,4-D (0.50 mg/l-1) and 6-BAP (0,25 mg/l-1) and was evaluated the grow dynamic and obtained the better resulted between 28 and 32 days after culture, for that which the obtained results will serve from base to other studies and they will allow to evaluate, to control and to develop strategies for the conservation and use of the natural resources, giving execution to the objective with respect to studying the dynamics of the growth potentially in the formation of tripes embriogénicos in the cultivation of the sweet potato.
Assuntos
Ipomoea batatas/crescimento & desenvolvimento , Ipomoea batatas/embriologia , Ipomoea batatas/enzimologia , Ipomoea batatas/fisiologia , Ipomoea batatas/genética , Ipomoea batatas/imunologia , Ipomoea batatas/metabolismo , Ipomoea batatas/microbiologia , Ipomoea batatas/parasitologia , Ipomoea batatas/químicaRESUMO
This study was intended to determine the modulatory effects of dietary supplementation of purple sweet potato (Ipomoea batats Poir., PSP) on the immune response of chickens. PSP was included in a basal starter diet by 1% (PSP(L)) or 3% (PSP(H)) and continually fed. Newcastle disease (NDV) vaccine, Brucella abortus (BA) and sheep red blood cells (SRBC) were used for chicken immunization. Antibody titers against these antigens were used to estimate humoral immunity. Concanavalin A (Con A)-induced proliferations of splenocytes, thymocytes and peripheral blood lymphocytes (PBL), ratios of CD4- and CD8-single positive and CD4-CD8-double negative (DN) cells in splenocytes, were both used to indicate cellular immunity. Relative weights of spleen, thymus and bursa and white blood cell (WBC) counts were studied. PSP(H) increased anti-NDV (P < 0.05), anti-BA (P < 0.01) and anti-SRBC titers (P < 0.05) in response to secondary immunization, whereas PSP(L) increased titers of anti-BA (P < 0.05) and anti-SRBC (P < 0.01). Proliferations of splenocytes and thymocytes were augmented with PSP(L) (P < 0.05). PSP(H)-treated chickens had lower (P < 0.05) ratios of CD4-single positive lymphocytes. Proliferation of PBL, weights of lymphoid organs and WBC counts were not affected. These results suggest that dietary PSP supplementation could enhance the immune response after immunization in chickens.
Assuntos
Ração Animal , Imunidade Celular , Imunomodulação , Ipomoea batatas/imunologia , Doença de Newcastle/prevenção & controle , Animais , Anticorpos/imunologia , Antígenos de Bactérias/imunologia , Brucella abortus/imunologia , Bolsa de Fabricius/efeitos dos fármacos , Bolsa de Fabricius/imunologia , Galinhas , Dieta , Suplementos Nutricionais , Eritrócitos/imunologia , Imunização , Ipomoea batatas/metabolismo , Baço/efeitos dos fármacos , Baço/imunologia , Timo/efeitos dos fármacos , Timo/imunologia , Vacinas/imunologia , Vacinas/farmacologiaRESUMO
Un elemento esencial en la investigación con microorganismos fitopatógenos es su conservación y uso seguro.Desde este punto de vista, en este estudio se evaluaron métodos de conservación de hongos que atacanel ñame, empleando como factores de respuesta el potencial de viabilidad, y la estabilidad y presencia o ausenciade cambios en las características macro y microscópicas. Como resultado del trabajo se proponen los métodos más adecuados para los géneros Colletotrichum y Fusarium, hongos causantes de las mayores pérdidasen las plantaciones de ñame en la Costa Caribe colombiana. Las cepas utilizadas en este estudio provienen de las colecciones de la Universidad de Sucre, del Instituto de Biotecnología de la Universidad Nacional de Colombia (IBUN) y de una donación de la doctora Lucía Afanador de la Universidad Nacional, Sede Medellín.Estas fueron sometidas a diferentes métodos de conservación, entre ellos criopreservación, liofilizacióny cultivo periódico con y sin aceite mineral. Los resultados obtenidos permitieron elegir la criopreservacióncomo el método más eficiente para la conservación de la colección, y el cultivo periódico con aceite mineralcomo método alternativo y complementario. Estos minimizan el riesgo de pérdida del material biológico y brindan condiciones de manejo que conservan las características biológicas bajo estudio desde campos comola microbiología, la bioquímica y la biología molecular, entre otros.
An essential element in phytopathogenic microorganism research is their preservation and safe use. The purposeof this study was to evaluate methods for preserving fungi producing diseases in yam, using potential viability, stability and the presence or absence of macro- and microscopic characteristic changes as response factors. More suitable methods for Colletotrichum and Fusarium genera were proposed as a result of the work; these are fungi causing the greatest losses in yam plantations on the Colombian Caribbean Coast. The strains used in this study came from collections kept at the University of Sucre and the Universidad Nacional de Colombias Institute of Biotechnology (IBUN) in Bogota and a donation from Dr Lucia Afanador from the Universidad Nacional in Medellín. These strains were subjected to different preservation methods, including cryopreservation, lyophilisation and periodic culture with and without mineral oil. The results led to choosing cryopreservation as the most efficient method for preserving the collection and the periodic culture withmineral oil as an alternative and complementary method. These minimised the risk of biological material loss and provided handling conditions conserving the biological characteristics of the fungi being studied from the fields of microbiology, biochemistry and molecular biology.