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1.
BMC Genomics ; 25(1): 831, 2024 Sep 03.
Artigo em Inglês | MEDLINE | ID: mdl-39227779

RESUMO

Pectobacterium carotovorum and Pectobacterium aroidearum represent the primary pathogens causing variable soft rot disease. However, the fundamental defense responses of Pinellia ternata to pathogens remain unclear. Our investigation demonstrated that the disease produced by P. carotovorum is more serious than P. aroidearum. RNA-seq analysis indicated that many cell wall-related genes, receptor-like kinase genes, and resistance-related genes were induced by P. aroidearum and P. carotovorum similarly. But many different regulatory pathways exert a crucial function in plant immunity against P. aroidearum and P. carotovorum, including hormone signaling, whereas more auxin-responsive genes were responsive to P. carotovorum, while more ethylene and gibberellin-responsive genes were responsive to P. aroidearum. 12 GDSL esterase/lipase genes and 3 fasciclin-like arabinogalactan protein genes were specifically upregulated by P. carotovorum, whereas 11 receptor-like kinase genes and 8 disease resistance genes were up-regulated only by P. aroidearum. Among them, a lectin gene (part1transcript/39001) was induced by P. carotovorum and P. aroidearum simultaneously. Transient expression in N. benthamiana demonstrated that the lectin gene improves plant resistance to P. carotovorum. This study offers a comprehensive perspective on P. ternata immunity produced by different soft rot pathogens and reveals the importance of lectin in anti-soft rot of P. ternata for the first time.


Assuntos
Resistência à Doença , Perfilação da Expressão Gênica , Pectobacterium carotovorum , Pinellia , Doenças das Plantas , Doenças das Plantas/microbiologia , Doenças das Plantas/genética , Doenças das Plantas/imunologia , Pinellia/genética , Pinellia/microbiologia , Pectobacterium carotovorum/fisiologia , Resistência à Doença/genética , Pectobacterium/genética , Regulação da Expressão Gênica de Plantas , Transcriptoma
2.
Physiol Plant ; 176(4): e14481, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-39164920

RESUMO

Potatoes (Solanum tuberosum L.) are one of the world's major staple crops. In stored potatoes, Pectobacterium carotovorum subsp carotovorum causes soft rot. As a result of the rapid spread of the disease during post-harvest storage, potato production suffers huge losses. By detecting disease early and controlling it promptly, losses can be minimized. The profile of volatiles of plants can be altered by phytopathogens. Identifying unique volatile organic compounds (VOCs) as biomarkers for early disease detection has attracted considerable research attention. This study compared the VOC profiles of healthy and soft rot inoculated potatoes (cv. "Kufri Pukhraj") over a time course using gas chromatography-mass spectrometry (GC-MS). It was found that there was a differential emission of 27 VOCs between healthy non-inoculated potatoes and soft rot inoculated potatoes. Among 27 VOCs, only five (1-octen-3-ol, 2-methylisoborneol, 3-octanone, 1,4-dimethyladamantane, and 2-methyl-2-bornene) were found exclusively in soft rot inoculated potatoes, suggesting them potential biomarker for non-destructive prediction of soft rot disease in potatoes. Reactive oxygen species (H2O2) and phytohormone methyl-jasmonate (MeJa) levels increased transiently on infection with soft rot. The analysis of the primary metabolism of soft rot infected tubers at three different stages suggests metabolic reprogramming that occurs at the early stage of infection, possibly leading to biomarker volatile emission. Based on these results, it appears that the initial potato-soft rot bacteria interaction initiates metabolic reprogramming mainly through H2O2 and the MeJa signalling pathway. In asymptomatic potatoes, these biomarkers may be promising candidates for non-destructive detection of soft rot at an early stage. These biomarkers can be used to develop an e-nose sensor to predict soft rot in the future.


Assuntos
Biomarcadores , Doenças das Plantas , Reguladores de Crescimento de Plantas , Solanum tuberosum , Compostos Orgânicos Voláteis , Solanum tuberosum/microbiologia , Solanum tuberosum/metabolismo , Compostos Orgânicos Voláteis/metabolismo , Compostos Orgânicos Voláteis/análise , Doenças das Plantas/microbiologia , Biomarcadores/metabolismo , Reguladores de Crescimento de Plantas/metabolismo , Reguladores de Crescimento de Plantas/análise , Cromatografia Gasosa-Espectrometria de Massas/métodos , Ciclopentanos/metabolismo , Pectobacterium carotovorum/patogenicidade , Pectobacterium carotovorum/fisiologia , Oxilipinas/metabolismo , Oxilipinas/análise , Tubérculos/microbiologia , Tubérculos/metabolismo
3.
Molecules ; 27(16)2022 Aug 19.
Artigo em Inglês | MEDLINE | ID: mdl-36014529

RESUMO

The abuse of agricultural antibiotics has led to the emergence of drug-resistant phytopathogens. Rifampicin and streptomycin and streptomycin resistance Pectobacterium carotovorum subsp. carotovorum (PccS1) was obtained from pathological plants in a previous experiment. Rheum tanguticum, derived from the Chinese plateau area, exhibits excellent antibacterial activity against PccS1, yet the action mode has not been fully understood. In present text, the cell wall integrity of the PccS1 was tested by the variation of the cellular proteins, SDS polyacrylamide gel electrophoresis (SDS-PAGE), scanning electron microscopy (SEM) and Fourier transform infrared spectrophotometer (FTIR) characteristics. Label-free quantitative proteomics was further used to identify the DEPs in the pathogen response to treatment with Rheum tanguticum Maxim. ex Balf. extract (abbreviated as RTMBE). Based on the bioinformatics analysis of these different expressed proteins (DEPs), RTMBE mainly inhibited some key protein expressions of beta-Lactam resistance, a two-component system and phosphotransferase system. Most of these membrane proteins were extraordinarily suppressed, which was also consistent with the morphological tests. In addition, from the downregulated flagellar motility related proteins, it was also speculated that RTMBE played an essential antibacterial role by affecting the swimming motility of the cells. The results indicated that Rheum tanguticum can be used to attenuate the virulence of the drug-resistant phytopathogenic bacteria.


Assuntos
Pectobacterium carotovorum , Rheum , Antibacterianos/metabolismo , Antibacterianos/farmacologia , Parede Celular/metabolismo , Pectobacterium , Pectobacterium carotovorum/fisiologia , Estreptomicina
4.
Molecules ; 27(12)2022 Jun 09.
Artigo em Inglês | MEDLINE | ID: mdl-35744835

RESUMO

The feasibility of early disease detection in potato seeds storage monitoring of volatile organic compounds (VOCs) and plant physiological markers was evaluated using 10 fungal and bacterial pathogens of potato in laboratory-scale experiments. Data analysis of HS-SPME-GC-MS revealed 130 compounds released from infected potatoes, including sesquiterpenes, dimethyl disulfide, 1,2,4-trimethylbenzene, 2,6,11-trimethyldodecane, benzothiazole, 3-octanol, and 2-butanol, which may have been associated with the activity of Fusarium sambucinum, Alternaria tenuissima and Pectobacterium carotovorum. In turn, acetic acid was detected in all infected samples. The criteria of selection for volatiles for possible use as incipient disease indicators were discussed in terms of potato physiology. The established physiological markers proved to demonstrate a negative effect of phytopathogens infecting seed potatoes not only on the kinetics of stem and root growth and the development of the entire root system, but also on gas exchange, chlorophyll content in leaves, and yield. The negative effect of phytopathogens on plant growth was dependent on the time of planting after infection. The research also showed different usefulness of VOCs and physiological markers as the indicators of the toxic effect of inoculated phytopathogens at different stages of plant development and their individual organs.


Assuntos
Solanum tuberosum , Compostos Orgânicos Voláteis , Biomarcadores , Cromatografia Gasosa-Espectrometria de Massas , Pectobacterium carotovorum/fisiologia , Doenças das Plantas/microbiologia , Solanum tuberosum/microbiologia
5.
Bioengineered ; 12(1): 1173-1188, 2021 12.
Artigo em Inglês | MEDLINE | ID: mdl-33830860

RESUMO

Transcriptome is used to determine the induction response of Pinellia ternata (Thunb.) Breit T2 plus line (abbreviated as PT2P line) infected with Pectobacterium carotovorum. The main objective of the study was to deal with the transcriptome database of PT2P line resistance to soft rot pathogens to provide a new perspective for identifying the resistance-related genes and understanding the molecular mechanism. Results indicated that water soaking and tissue collapse started at 20 h after PT2P line was infected by P. carotovorum. A total of 1360 and 5768 differentially expressed genes (DEGs) were identified at 0 h and 20 h, respectively. After 20 h of infection, growth and development-related pathways were inhibited. Meanwhile, DEGs were promoted the colonization of P. carotovorum pathogens in specific cell wall modification processes at the early infected stage. A shift to a defensive response was triggered at 0 h. A large number of DEGs were mainly up-controlled at 20 h and were substantially used in the pathogen recognition and the introduction of signal transformation cascades, secondary metabolites biosynthesis, pathogenic proteins activation, transcription aspects and numerous transporters. Furthermore, our data provided novel insights into the transcript reprogramming of PT2P line in response to P. carotovorum infestation.


Assuntos
Perfilação da Expressão Gênica , Interações Hospedeiro-Patógeno/genética , Pectobacterium carotovorum/fisiologia , Pinellia/genética , Pinellia/microbiologia , Doenças das Plantas/genética , Doenças das Plantas/microbiologia , Regulação da Expressão Gênica de Plantas , Ontologia Genética , Anotação de Sequência Molecular , Reguladores de Crescimento de Plantas/metabolismo , Transdução de Sinais/genética
6.
Mol Plant Microbe Interact ; 34(3): 297-308, 2021 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-33231502

RESUMO

Many plant-encoded E3 ligases are known to be involved in plant defense. Here, we report a novel role of E3 ligase SALT- AND DROUGHT-INDUCED RING FINGER1 (SDIR1) in plant immunity. Even though SDIR1 is reasonably well-characterized, its role in biotic stress response is not known. The silencing of SDIR1 in Nicotiana benthamiana reduced the multiplication of the virulent bacterial pathogen Pseudomonas syringae pv. tabaci. The Arabidopsis sdir1 mutant is resistant to virulent pathogens, whereas SDIR1 overexpression lines are susceptible to both host and nonhost hemibiotrophic bacterial pathogens. However, sdir1 mutant and SDIR1 overexpression lines showed hypersusceptibility and resistance, respectively, against the necrotrophic pathogen Erwinia carotovora. The mutant of SDIR1 target protein, i.e., SDIR-interacting protein 1 (SDIR1P1), also showed resistance to host and nonhost pathogens. In SDIR1 overexpression plants, transcripts of NAC transcription factors were less accumulated and the levels of jasmonic acid (JA) and abscisic acid were increased. In the sdir1 mutant, JA signaling genes JAZ7 and JAZ8 were downregulated. These data suggest that SDIR1 is a susceptibility factor and its activation or overexpression enhances disease caused by P. syringae pv. tomato DC3000 in Arabidopsis. Our results show a novel role of SDIR1 in modulating plant defense gene expression and plant immunity.[Formula: see text] Copyright © 2021 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license.


Assuntos
Proteínas de Arabidopsis , Arabidopsis , Resistência à Doença , Interações Hospedeiro-Patógeno , Ubiquitina-Proteína Ligases , Arabidopsis/enzimologia , Arabidopsis/genética , Proteínas de Arabidopsis/genética , Proteínas de Arabidopsis/metabolismo , Resistência à Doença/genética , Regulação da Expressão Gênica de Plantas , Interações Hospedeiro-Patógeno/genética , Pectobacterium carotovorum/fisiologia , Doenças das Plantas/microbiologia , Pseudomonas syringae/fisiologia , Nicotiana/enzimologia , Nicotiana/microbiologia , Ubiquitina-Proteína Ligases/genética , Ubiquitina-Proteína Ligases/metabolismo
7.
J Mater Chem B ; 8(47): 10845-10853, 2020 12 21.
Artigo em Inglês | MEDLINE | ID: mdl-33180891

RESUMO

Magnetic cobalt Ferrite nanoparticles capped with caprylate groups, CH3(CH2)6CO2-, have been synthesized using a novel non-hydrolytic coprecipitation method under inert conditions. Particle diameter was characterized using dynamic light scattering (DLS) and transmission electron microscopy (TEM). The spinel ferrite crystal phase was verified using X-ray diffraction (XRD), and the presence of the capping agent was confirmed using Fourier Transform Infrared spectroscopy (FTIR). Bactericidal effects of the particles were tested against broth cultures of Erwinia carotovora and Stenotrophomonas maltophilia. The final particles had an average diameter of 3.81 nm and readily responded to a neodymium magnet. The particles did have a significant effect on the OD600 of both broth cultures.


Assuntos
Antibacterianos/síntese química , Caprilatos/síntese química , Compostos Férricos/síntese química , Nanopartículas Metálicas/química , Pectobacterium carotovorum/efeitos dos fármacos , Stenotrophomonas maltophilia/efeitos dos fármacos , Antibacterianos/farmacologia , Caprilatos/farmacologia , Sobrevivência Celular/efeitos dos fármacos , Sobrevivência Celular/fisiologia , Cobalto/farmacologia , Relação Dose-Resposta a Droga , Compostos Férricos/farmacologia , Humanos , Hidrólise , Nanopartículas Metálicas/administração & dosagem , Pectobacterium carotovorum/fisiologia , Stenotrophomonas maltophilia/fisiologia , Células THP-1
8.
J Sci Food Agric ; 100(12): 4575-4582, 2020 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-32424855

RESUMO

BACKGROUND: Erwinia carotovora subsp. cause the potato soft rot, which is a major disease in agriculture. Antibacterial agents currently applied on potato soft rot often offer a restricted control and have several disadvantages. Propolis has shown a wide range of antimicrobial activity, although its effect has not been investigated on E. carotovora subsp. In this work, we tested extracts from propolis samples of Northwest Argentina against E. carotovora subsp. RESULTS: Ethanolic propolis extracts (EPEs) from samples of Santiago del Estero province, particularly from sample 4 (EPE4), showed the highest antibacterial activity, which was associated with the highest content of flavonoids. 2',4'-Dihydroxychalcone, 2',4'-dihydroxy-3'-methoxychalcone, galangin, and pinocembrin were identified as antibacterial constituents of EPE4. 2',4'-Dihydroxychalcone showed an antibacterial activity (minimum inhibitory concentration, MIC = 0.3-1.2 µg gallic acid equivalents (GAE) mL-1 ; minimum bactericidal concentration, MBC = 0.6-4.8 µg GAE mL-1 ) lower than that of bacterimycin (MIC = 2.4-9.6 µg mL-1 ; MBC = 19.2-38.4 µg GAE mL-1 ) and streptocycline (MIC = 19.2-38.4 µg mL-1 ; MBC = 38.4-76.8 µg mL-1 ). Preventive assays on unwounded and wounded potatoes showed that their immersion in EPE4 containing 87.5 µg GAE mL-1 or streptocycline containing 40 µg mL-1 was equally effective in controlling potato soft rot, reducing the disease incidence by 64.6-67.0% (unwounded tubers) and 88.0-86.0% (wounded tubers) and the disease severity by 49.8-49.8% (unwounded tubers) and 54.5-68.5% (wounded tubers). CONCLUSIONS: Flavonoid-rich propolis extracts from Northwest Argentina efficiently reduced in vivo the incidence and severity of potato soft rot caused by E. carotovora subsp.


Assuntos
Fungicidas Industriais/farmacologia , Pectobacterium carotovorum/efeitos dos fármacos , Doenças das Plantas/microbiologia , Própole/farmacologia , Solanum tuberosum/microbiologia , Argentina , Fungicidas Industriais/química , Testes de Sensibilidade Microbiana , Pectobacterium carotovorum/fisiologia , Doenças das Plantas/prevenção & controle , Tubérculos/microbiologia , Própole/química
9.
J Plant Physiol ; 246-247: 153132, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-32062292

RESUMO

Studies have shown that pathogenic bacteria infections induce the overproduction of reactive oxygen species (ROS) in plants. Cyanide-resistant respiration, an energy-dissipating pathway in plants, has also been induced by a pathogenic bacteria infection. However, it is unknown whether the induction of cyanide-resistant respiration under the pathogenic bacteria infection was caused by ROS. In this study, two pathogenic Erwinia strains were used to infect potato tuber, and membrane lipid peroxidation levels and the cyanide-resistant respiration capacity were determined. In addition, StAOX expression and regulation by ROS in potato tuber were analyzed. Moreover, the role of the Ca2+ pathway in regulating cyanide-resistant respiration was determined. The results showed that ROS induced cyanide-resistant respiration in potato tuber infected by Erwinia. Cyanide-resistant respiration inhibited the production of H2O2. Intracellular Ca2+ regulated the expression of calcium-dependent protein kinase (StCDPK1, StCDPK4, and StCDPK5) in potato, which indirectly controlled intracellular ROS levels. These results indicate that Ca2+ metabolism is involved in ROS-induced cyanide-resistant respiration.


Assuntos
Cianetos/metabolismo , Peroxidação de Lipídeos , Pectobacterium carotovorum/fisiologia , Espécies Reativas de Oxigênio/metabolismo , Solanum tuberosum/fisiologia , Regulação da Expressão Gênica de Plantas , Proteínas de Plantas/metabolismo , Tubérculos/enzimologia , Tubérculos/microbiologia , Tubérculos/fisiologia , Solanum tuberosum/enzimologia , Solanum tuberosum/microbiologia
10.
Appl Environ Microbiol ; 86(6)2020 03 02.
Artigo em Inglês | MEDLINE | ID: mdl-31953332

RESUMO

Bacterial soft rot diseases caused by Pectobacterium spp. and Dickeya spp. affect a wide range of crops, including potatoes, a major food crop. As of today, farmers mostly rely on sanitary practices, water management, and plant nutrition for control. We tested the bacterial predators Bdellovibrio and like organisms (BALOs) to control potato soft rot. BALOs are small, motile predatory bacteria found in terrestrial and aquatic environments. They prey on a wide range of Gram-negative bacteria, including animal and plant pathogens. To this end, BALO strains HD100, 109J, and a ΔmerRNA derivative of HD100 were shown to efficiently prey on various rot-causing strains of Pectobacterium and Dickeya solani BALO control of maceration caused by a highly virulent strain of Pectobacterium carotovorum subsp. brasilense was then tested in situ using a potato slice assay. All BALO strains were highly effective at reducing disease, up to complete prevention. Effectivity was concentration dependent, and BALOs applied before P. carotovorum subsp. brasilense inoculation performed significantly better than those applied after the disease-causing agent, maybe due to in situ consumption of glucose by the prey, as glucose metabolism by live prey bacteria was shown to prevent predation. Dead predators and the supernatant of BALO cultures did not significantly prevent maceration, indicating that predation was the major mechanism for the prevention of the disease. Finally, plastic resistance to predation was affected by prey and predator population parameters, suggesting that population dynamics affect prey response to predation.IMPORTANCE Bacterial soft rot diseases caused by Pectobacterium spp. and Dickeya spp. are among the most important plant diseases caused by bacteria. Among other crops, they inflict large-scale damage to potatoes. As of today, farmers have few options to control them. The bacteria Bdellovibrio and like organisms (BALOs) are obligate predators of bacteria. We tested their potential to prey on Pectobacterium spp. and Dickeya spp. and to protect potato. We show that different BALOs can prey on soft rot-causing bacteria and prevent their growth in situ, precluding tissue maceration. Dead predators and the supernatant of BALO cultures did not significantly prevent maceration, showing that the effect is due to predation. Soft rot control by the predators was concentration dependent and was higher when the predator was inoculated ahead of the prey. As residual prey remained, we investigated what determines their level and found that initial prey and predator population parameters affect prey response to predation.


Assuntos
Bdellovibrio/fisiologia , Enterobacteriaceae/fisiologia , Cadeia Alimentar , Doenças das Plantas/prevenção & controle , Solanum tuberosum/microbiologia , Pectobacterium carotovorum/fisiologia , Doenças das Plantas/microbiologia
11.
Molecules ; 24(24)2019 Dec 13.
Artigo em Inglês | MEDLINE | ID: mdl-31847295

RESUMO

The aim of this paper was to study the polyphenols of peel and pulp of three Citrus taxa-Citrus medica, Citrus bergamia, and Citrus medica cv. Salò-cultivated in the Cosenza province, Southern Italy, and to evaluate their antioxidant and antibacterial activity, performed against Escherichia coli, Listeria monocytogenes, Pseudomonas aeruginosa, Staphylococcus aureus, and Pectobacterium carotovorum. Furthermore, we assessed the inhibitory effect of the extracts on bacterial capacity to form biofilm, and on the metabolic activity of the cells present therein. The results indicated that such extracts could find new potential applications in the field of natural antioxidant and anti-bacterial agents in pharmaceutics, agriculture, and food fields.


Assuntos
Antibacterianos/química , Antioxidantes/química , Biofilmes/efeitos dos fármacos , Citrus/química , Polifenóis/química , Antibacterianos/farmacologia , Antioxidantes/farmacologia , Escherichia coli/efeitos dos fármacos , Escherichia coli/fisiologia , Listeria monocytogenes/efeitos dos fármacos , Listeria monocytogenes/fisiologia , Testes de Sensibilidade Microbiana , Pectobacterium carotovorum/efeitos dos fármacos , Pectobacterium carotovorum/fisiologia , Extratos Vegetais/química , Polifenóis/farmacologia , Pseudomonas aeruginosa/efeitos dos fármacos , Pseudomonas aeruginosa/fisiologia , Staphylococcus aureus/efeitos dos fármacos , Staphylococcus aureus/fisiologia
12.
J Food Sci ; 84(9): 2603-2609, 2019 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-31518463

RESUMO

Cross-contamination of Pectobacterium carotovorum subsp. carotovorum (PCC) from a stainless-steel surface to cabbage (Brassica rapa L. subsp. pekinensis) was evaluated. To investigate the PCC transfer pattern from mechanical knife surfaces to cabbage during 100 cuts, two mathematical models (power and logarithmic model) were fitted to the mean log10 detection data from cabbage. Overall, regression analysis determined that the best-fitting regression curves of planktonic cells and detached cells from biofilms transferred onto fresh cabbage were Y = 3.7X-0.41 , RMSE = 0.371 and Y = 4.6X-0.35 , RMSE = 0.254, respectively. For salted cabbage, the best-fit regression curves of planktonic cells and biofilm were Y = 5.8X-0.38 , RMSE = 0.209 and Y = 5.4X-0.23 , RMSE = 0.195, respectively. Our data provide a meaningful indication of the level of PCC cross-contamination.


Assuntos
Biofilmes , Brassica/microbiologia , Alimentos Fermentados/microbiologia , Pectobacterium carotovorum , Plâncton , Pectobacterium carotovorum/citologia , Pectobacterium carotovorum/fisiologia , Plâncton/fisiologia
13.
Mar Drugs ; 17(7)2019 Jun 28.
Artigo em Inglês | MEDLINE | ID: mdl-31261836

RESUMO

N-Acylhomoserine lactonase degrades the lactone ring of N-acylhomoserine lactones (AHLs) and has been widely suggested as a promising candidate for use in bacterial disease control. While a number of AHL lactonases have been characterized, none of them has been developed as a commercially available enzymatic product for in vitro AHL quenching due to their low stability. In this study, a highly stable AHL lactonase (AhlX) was identified and isolated from the marine bacterium Salinicola salaria MCCC1A01339. AhlX is encoded by a 768-bp gene and has a predicted molecular mass of 29 kDa. The enzyme retained approximately 97% activity after incubating at 25 °C for 12 days and ~100% activity after incubating at 60 °C for 2 h. Furthermore, AhlX exhibited a high salt tolerance, retaining approximately 60% of its activity observed in the presence of 25% NaCl. In addition, an AhlX powder made by an industrial spray-drying process attenuated Erwinia carotovora infection. These results suggest that AhlX has great potential for use as an in vitro preventive and therapeutic agent for bacterial diseases.


Assuntos
Antibacterianos/farmacologia , Organismos Aquáticos/enzimologia , Proteínas de Bactérias/farmacologia , Hidrolases de Éster Carboxílico/farmacologia , Halomonadaceae/enzimologia , Acil-Butirolactonas/química , Antibacterianos/química , Antibacterianos/isolamento & purificação , Proteínas de Bactérias/química , Proteínas de Bactérias/isolamento & purificação , Biotecnologia , Brassica rapa/microbiologia , Hidrolases de Éster Carboxílico/química , Hidrolases de Éster Carboxílico/isolamento & purificação , Ensaios Enzimáticos , Estabilidade Enzimática , Pectobacterium carotovorum/efeitos dos fármacos , Pectobacterium carotovorum/fisiologia , Doenças das Plantas/microbiologia , Doenças das Plantas/prevenção & controle , Percepção de Quorum/efeitos dos fármacos , Solanum tuberosum/microbiologia , Temperatura
14.
BMC Genomics ; 20(1): 486, 2019 Jun 13.
Artigo em Inglês | MEDLINE | ID: mdl-31195968

RESUMO

BACKGROUND: Pectobacterium carotovorum subsp. brasiliense is a broad host range bacterial pathogen, which causes blackleg of potatoes and bacterial soft rot of vegetables worldwide. Production of plant cell wall degrading enzymes is usually critical for Pectobacterium infection. However, other virulence factors and the mechanisms of genetic adaptation still need to be studied in detail. RESULTS: In this study, the complete genome of P. carotovorum subsp. brasiliense strain SX309 isolated from cucumber was compared with eight other pathogenic bacteria belonging to the Pectobacterium genus, which were isolated from various host plants. Genome comparison revealed that most virulence genes are highly conserved in the Pectobacterium strains, especially for the key virulence determinants involved in the biosynthesis of extracellular enzymes and others including the type II and III secretion systems, quorum sensing system, flagellar and chemotactic genes. Nevertheless, some variable regions of the T6SS and the CRISP-Cas immune system are unique for P. carotovorum subsp. brasiliense. CONCLUSIONS: The extensive comparative genomics analysis revealed highly conserved virulence genes in the Pectobacterium strains. However, several variable regions of type VI secretion system and two subtype Cas mechanism-Cas immune systems possibly contribute to the process of Pectobacterium infection and adaptive immunity.


Assuntos
Genômica , Pectobacterium carotovorum/genética , Fenótipo , Imunidade Adaptativa/genética , Parede Celular/metabolismo , Quimiotaxia/genética , Repetições Palindrômicas Curtas Agrupadas e Regularmente Espaçadas/genética , Flagelos/genética , Interações Hospedeiro-Patógeno , Lipopolissacarídeos/biossíntese , Pectobacterium carotovorum/citologia , Pectobacterium carotovorum/imunologia , Pectobacterium carotovorum/fisiologia , Análise de Sequência
15.
Virol Sin ; 34(3): 287-294, 2019 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-30868359

RESUMO

Soft rot is an economically significant disease in potato and one of the major threats to sustainable potato production. This study aimed at isolating lytic bacteriophages and evaluating methods for and the efficacy of applying phages to control potato soft rot caused by Pectobacterium carotovorum. Eleven bacteriophages isolated from soil and water samples collected in Wuhan, China, were used to infect P. carotovorum host strains isolated from potato tubers showing soft rot symptoms in Nakuru county, Kenya. The efficacy of the phages in controlling soft rot disease was evaluated by applying individual phage strains or a phage cocktail on potato slices and tubers at different time points before or after inoculation with a P. carotovorum strain. The phages could lyse 20 strains of P. carotovorum, but not Pseudomonas fluorescens control strains. Among the 11 phages, Pectobacterium phage Wc5r, interestingly showed cross-activity against Pectobacterium atrosepticum and two phage-resistant P. carotovorum strains. Potato slice assays showed that the phage concentration and timing of application are crucial factors for effective soft rot control. Phage cocktail applied at a concentration of 1 × 109 plaque-forming units per milliliter before or within an hour after bacterial inoculation on potato slices, resulted in ≥ 90% reduction of soft rot symptoms. This study provides a basis for the development and application of phages to reduce the impact of potato soft rot disease.


Assuntos
Bacteriófagos/isolamento & purificação , Agentes de Controle Biológico/isolamento & purificação , Doenças das Plantas/prevenção & controle , Tubérculos/microbiologia , Solanum tuberosum/microbiologia , Antibiose , China , Quênia , Pectobacterium carotovorum/fisiologia , Doenças das Plantas/microbiologia , Microbiologia do Solo , Microbiologia da Água
16.
Plant Dis ; 103(3): 398-403, 2019 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-30629463

RESUMO

Neobuxbaumia tetetzo (Coulter) Backeberg (tetecho) is a columnar cactus endemic to Mexico. Tetecho plants, flowers, fruits, and seeds play an important role in the semiarid ecosystem, as they serve as a refuge and food for insects, bats, and birds, and are widely used by ethnic groups since pre-Hispanic times. Tetecho is affected by a soft rot that damages the whole plant and causes its fall and disintegration. Eight bacterial colonies of similar morphology were isolated from plants showing soft rot and inoculated in healthy tetecho plants, reproducing typical symptoms of soft rot 9 days after inoculation. Ten representative isolates were selected for phenotypic and genetic identification using 16s rDNA, IGS 16S-23S rDNA, and rpoS genes and for pathogenicity tests on several members of the cactus family and other plants. Based on the results, these bacterial isolates were identified as Pectobacterium carotovorum subsp. brasiliense. Inoculation of this bacteria caused soft rot in different cacti, fruits, leaves, and roots of other plants. This is the first report of the subspecies brasiliense of P. carotovorum causing soft rot and death in cacti in the world and the first report of this subspecies in Mexico.


Assuntos
Cactaceae , Pectobacterium carotovorum , Cactaceae/microbiologia , DNA Bacteriano/genética , México , Pectobacterium carotovorum/classificação , Pectobacterium carotovorum/genética , Pectobacterium carotovorum/fisiologia , Doenças das Plantas/microbiologia
17.
Environ Microbiol ; 21(3): 940-948, 2019 03.
Artigo em Inglês | MEDLINE | ID: mdl-30461142

RESUMO

Archaea have inhabited the earth for a long period of time and are ubiquitously distributed in diverse environments. However, few studies have focused on the interactions of archaea with other organisms, including eukaryotes such as plants, since it is difficult to cultivate sufficient numbers of archaeal cells for analysis. In this study, we investigated the interaction between soil archaea and Arabidopsis thaliana. We demonstrate for the first time that soil archaea promote plant growth and trigger induced systemic resistance (ISR) against the necrotrophic bacterium Pectobacterium carotovorum subsp. carotovorum SCC1 and biotrophic bacterium Pseudomonas syringae pv. tomato DC3000. Ammonia-oxidizing archaeon Nitrosocosmicus oleophilus MY3 cells clearly colonized the root surface of Arabidopsis plants, and increased resistance against both pathogenic species via the salicylic acid-independent signalling pathway. This mechanism of bacterial resistance resembles that underlying soil bacteria- and fungi-mediated ISR signalling. Additionally, volatile emissions from N. oleophilus MY3 were identified as major archaeal determinants that elicit ISR. Our results lay a foundation for archaea-plant interactions as a new field of research.


Assuntos
Arabidopsis/microbiologia , Archaea/fisiologia , Pectobacterium carotovorum/fisiologia , Doenças das Plantas/microbiologia , Pseudomonas syringae/fisiologia , Resistência à Doença , Desenvolvimento Vegetal , Ácido Salicílico/metabolismo , Transdução de Sinais , Microbiologia do Solo
18.
Mol Plant Microbe Interact ; 31(11): 1166-1178, 2018 11.
Artigo em Inglês | MEDLINE | ID: mdl-30198820

RESUMO

Hfq is a RNA chaperone and participates in a wide range of cellular processes and pathways. In this study, mutation of hfq gene from Pectobacterium carotovorum subsp. carotovorum PccS1 led to significantly reduced virulence and plant cell wall-degrading enzyme (PCWDE) activities. In addition, the mutant exhibited decreased biofilm formation and motility and greatly attenuated carbapenem production as well as secretion of hemolysin coregulated protein (Hcp) as compared with wild-type strain PccS1. Moreover, a higher level of callose deposition was induced in Nicotiana benthamiana leaves when infiltrated with the mutant. A total of 26 small (s)RNA deletion mutants were obtained among a predicted 27 sRNAs, and three mutants exhibited reduced virulence in the host plant. These results suggest that hfq plays a key role in Pectobacterium virulence by positively impacting PCWDE production, secretion of the type VI secretion system, bacterial competition, and suppression of host plant responses.


Assuntos
Biofilmes/crescimento & desenvolvimento , Calla (Planta)/microbiologia , Fator Proteico 1 do Hospedeiro/metabolismo , Pectobacterium carotovorum/enzimologia , Doenças das Plantas/microbiologia , Sistemas de Secreção Tipo VI/metabolismo , Sequência de Aminoácidos , Calla (Planta)/imunologia , Parede Celular/metabolismo , Regulação Bacteriana da Expressão Gênica , Glucanos/metabolismo , Fator Proteico 1 do Hospedeiro/genética , Pectobacterium carotovorum/genética , Pectobacterium carotovorum/patogenicidade , Pectobacterium carotovorum/fisiologia , Doenças das Plantas/imunologia , Folhas de Planta/imunologia , Folhas de Planta/microbiologia , Alinhamento de Sequência , Sistemas de Secreção Tipo VI/genética , Virulência
19.
Phytopathology ; 108(12): 1467-1474, 2018 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-29975159

RESUMO

Bacterial soft rot is a devastating disease affecting a variety of vegetable crops worldwide. One strategy for controlling this disease could be the ectopic expression of the plant ferredoxin-like protein (pflp) gene. PFLP was previously shown to intensify pathogen-associated molecular pattern-triggered immunity (PTI), an immune response triggered, for example, by the flagellin epitope flg22. To gain further insight into how PFLP intensifies PTI, flg22 was used as an elicitor in Arabidopsis thaliana. First, PFLP was confirmed to intensify the rapid generation of H2O2, callose deposition, and the hypersensitive response when coinfiltrated with flg22. This response correlated with increased expression of the FLG22-induced receptor kinase 1 gene, which is part of the mitogen-activated protein kinase (MAPK) pathway. Although the increased response to flg22 alone did not depend on the MAPK pathway genes MEKK1, MKK5, and MPK6, the protective effect of PFLP decreased when plants mutated in these genes were inoculated with Pectobacterium carotovorum subsp. carotovorum. Furthermore, expression of PR1 and PDF1.2 also increased upon treatment with flg22 in the presence of PFLP. Taken together, these results suggest that activation of the MAPK pathway contributes to the increased resistance to bacterial soft rot observed in plants treated with PFLP.


Assuntos
Arabidopsis/enzimologia , Resistência à Doença , Proteínas Quinases Ativadas por Mitógeno/metabolismo , Pectobacterium carotovorum/fisiologia , Doenças das Plantas/imunologia , Arabidopsis/genética , Arabidopsis/imunologia , Arabidopsis/microbiologia , Proteínas de Arabidopsis/genética , Proteínas de Arabidopsis/metabolismo , Flagelina/genética , Flagelina/metabolismo , Glucanos/metabolismo , Peróxido de Hidrogênio/metabolismo , Proteínas Quinases Ativadas por Mitógeno/genética , Doenças das Plantas/microbiologia
20.
Dokl Biol Sci ; 480(1): 107-109, 2018 May.
Artigo em Inglês | MEDLINE | ID: mdl-30009352

RESUMO

This is the first study demonstrating that ortho-phthalic acid esters, dibutylphthalate (DBP) and di-(2-ethylhexyl)-o-phthalate (DEHP), inhibit the ability to form biofilms of the biotrophic pathogen Clavibacter michiganensis ssp. sepedonicus and Pectobacterium carotovorum ssp. carotovorum necrotroph. Inhibition of biofilm formation depends on the DBP and DEHP concentrations.


Assuntos
Biofilmes/efeitos dos fármacos , Biofilmes/crescimento & desenvolvimento , Dietilexilftalato/farmacologia , Micrococcaceae/fisiologia , Pectobacterium carotovorum/fisiologia
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