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1.
Proc Natl Acad Sci U S A ; 118(23)2021 06 08.
Artigo em Inglês | MEDLINE | ID: mdl-34074781

RESUMO

Changes at the cell surface enable bacteria to survive in dynamic environments, such as diverse niches of the human host. Here, we reveal "Periscope Proteins" as a widespread mechanism of bacterial surface alteration mediated through protein length variation. Tandem arrays of highly similar folded domains can form an elongated rod-like structure; thus, variation in the number of domains determines how far an N-terminal host ligand binding domain projects from the cell surface. Supported by newly available long-read genome sequencing data, we propose that this class could contain over 50 distinct proteins, including those implicated in host colonization and biofilm formation by human pathogens. In large multidomain proteins, sequence divergence between adjacent domains appears to reduce interdomain misfolding. Periscope Proteins break this "rule," suggesting that their length variability plays an important role in regulating bacterial interactions with host surfaces, other bacteria, and the immune system.


Assuntos
Proteínas de Bactérias , Proteínas de Membrana , Streptococcus gordonii , Proteínas de Bactérias/química , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Proteínas de Membrana/química , Proteínas de Membrana/genética , Proteínas de Membrana/metabolismo , Streptococcus gordonii/química , Streptococcus gordonii/genética , Streptococcus gordonii/metabolismo
2.
J Biol Chem ; 296: 100249, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-33384382

RESUMO

The serine-rich repeat (SRR) glycoproteins of gram-positive bacteria are a family of adhesins that bind to a wide range of host ligands, and expression of SRR glycoproteins is linked with enhanced bacterial virulence. The biogenesis of these surface glycoproteins involves their intracellular glycosylation and export via the accessory Sec system. Although all accessory Sec components are required for SRR glycoprotein export, Asp2 of Streptococcus gordonii also functions as an O-acetyltransferase that modifies GlcNAc residues on the SRR adhesin gordonii surface protein B (GspB). Because these GlcNAc residues can also be modified by the glycosyltransferases Nss and Gly, it has been unclear whether the post-translational modification of GspB is coordinated. We now report that acetylation modulates the glycosylation of exported GspB. Loss of O-acetylation due to aps2 mutagenesis led to the export of GspB glycoforms with increased glucosylation of the GlcNAc moieties. Linkage analysis of the GspB glycan revealed that both O-acetylation and glucosylation occurred at the same C6 position on GlcNAc residues and that O-acetylation prevented Glc deposition. Whereas streptococci expressing nonacetylated GspB with increased glucosylation were significantly reduced in their ability to bind human platelets in vitro, deletion of the glycosyltransferases nss and gly in the asp2 mutant restored platelet binding to WT levels. These findings demonstrate that GlcNAc O-acetylation controls GspB glycosylation, such that binding via this adhesin is optimized. Moreover, because O-acetylation has comparable effects on the glycosylation of other SRR adhesins, acetylation may represent a conserved regulatory mechanism for the post-translational modification of the SRR glycoprotein family.


Assuntos
Glicoproteínas/genética , Glicosiltransferases/genética , Transporte Proteico/genética , Streptococcus gordonii/genética , Acetilação , Sequência de Aminoácidos/genética , Glicoproteínas/química , Glicosilação , Glicosiltransferases/química , Humanos , Proteínas de Membrana/química , Proteínas de Membrana/genética , Ligação Proteica/genética , Processamento de Proteína Pós-Traducional/genética , Serina/química , Serina/genética , Streptococcus gordonii/química
3.
Biochem J ; 477(19): 3695-3707, 2020 10 16.
Artigo em Inglês | MEDLINE | ID: mdl-32910185

RESUMO

Infective endocarditis (IE) is a cardiovascular disease often caused by bacteria of the viridans group of streptococci, which includes Streptococcus gordonii and Streptococcus sanguinis. Previous research has found that serine-rich repeat (SRR) proteins on the S. gordonii bacterial surface play a critical role in pathogenesis by facilitating bacterial attachment to sialylated glycans displayed on human platelets. Despite their important role in disease progression, there are currently no anti-adhesive drugs available on the market. Here, we performed structure-based virtual screening using an ensemble docking approach followed by consensus scoring to identify novel small molecule effectors against the sialoglycan binding domain of the SRR adhesin protein Hsa from the S. gordonii strain DL1. The screening successfully predicted nine compounds which were able to displace the native ligand (sialyl-T antigen) in an in vitro assay and bind competitively to Hsa. Furthermore, hierarchical clustering based on the MACCS fingerprints showed that eight of these small molecules do not share a common scaffold with the native ligand. This study indicates that SRR family of adhesin proteins can be inhibited by diverse small molecules and thus prevent the interaction of the protein with the sialoglycans. This opens new avenues for discovering potential drugs against IE.


Assuntos
Adesinas Bacterianas/química , Antibacterianos/química , Hemaglutininas Virais/química , Streptococcus gordonii/química , Adesinas Bacterianas/genética , Adesinas Bacterianas/metabolismo , Hemaglutininas Virais/genética , Hemaglutininas Virais/metabolismo , Domínios Proteicos , Streptococcus gordonii/genética , Streptococcus gordonii/metabolismo
4.
Biochem Biophys Res Commun ; 517(2): 266-271, 2019 09 17.
Artigo em Inglês | MEDLINE | ID: mdl-31349973

RESUMO

Bacterial family II pyrophosphatases (PPases) are homodimeric enzymes, with the active site located between two catalytic domains. Some family II PPases additionally contain regulatory cystathionine ß-synthase (CBS) domains and exhibit positive kinetic cooperativity, which is lost upon CBS domain removal. We report here that CBS domain-deficient family II PPases of Bacillus subtilis and Streptococcus gordonii also exhibit positive kinetic cooperativity, manifested as an up to a five-fold difference in the Michaelis constants for two active sites. An Asn79Ser replacement in S. gordonii PPase preserved its dimeric structure but abolished cooperativity. The results of our study indicated that kinetic cooperativity is an inherent property of all family II PPase types, is not induced by CBS domains, and is sensitive to minor structural changes. These findings may have inferences for other CBS-proteins, which include important enzymes and membrane transporters associated with hereditary diseases.


Assuntos
Bacillus subtilis/enzimologia , Pirofosfatase Inorgânica/metabolismo , Streptococcus gordonii/enzimologia , Bacillus subtilis/química , Bacillus subtilis/metabolismo , Domínio Catalítico , Cistationina beta-Sintase/química , Cistationina beta-Sintase/metabolismo , Pirofosfatase Inorgânica/química , Cinética , Magnésio/metabolismo , Modelos Moleculares , Domínios Proteicos , Multimerização Proteica , Streptococcus gordonii/química , Streptococcus gordonii/metabolismo
5.
Bull Exp Biol Med ; 165(3): 373-377, 2018 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-30003416

RESUMO

Protein G is present in group G streptococcus strain (G4223); the IgG-binding part of this protein contains three IgG-binding domains and binds human IgG with very high activity. We obtained two recombinant polypeptides G4223 and G14223 with high IgG-binding activity. Polypeptide G14223 consisting of three IgG-binding domains and W region has higher molecular weight and is characterized by higher affinity for IgG than polypeptide G4223 consisting of only three IgG-binding domains. It was shown that polypeptide affinity depends on its structure and size.


Assuntos
Proteínas de Bactérias/química , Imunoglobulina G/química , Peptídeos/química , Streptococcus gordonii/química , Sequência de Aminoácidos , Proteínas de Bactérias/genética , Proteínas de Bactérias/imunologia , Sequência de Bases , Sítios de Ligação , Clonagem Molecular , Escherichia coli/genética , Escherichia coli/metabolismo , Expressão Gênica , Humanos , Imunoglobulina G/genética , Imunoglobulina G/imunologia , Peso Molecular , Peptídeos/genética , Peptídeos/imunologia , Plasmídeos/química , Plasmídeos/metabolismo , Ligação Proteica , Domínios e Motivos de Interação entre Proteínas , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/imunologia , Alinhamento de Sequência , Homologia de Sequência de Aminoácidos
6.
Glycobiology ; 28(8): 601-611, 2018 08 01.
Artigo em Inglês | MEDLINE | ID: mdl-29796594

RESUMO

Streptococcus gordonii and Streptococcus sanguinis are typically found among the normal oral microbiota but can also cause infective endocarditis. These organisms express cell surface serine-rich repeat adhesins containing "Siglec-like" binding regions (SLBRs) that mediate attachment to α2-3-linked sialic acids on human glycoproteins. Two known receptors for the Siglec-like adhesins are the salivary mucin MG2/MUC7 and platelet GPIbα, and the interaction of streptococci with these targets may contribute to oral colonization and endocarditis, respectively. The SLBRs display a surprising diversity of preferences for defined glycans, ranging from highly selective to broader specificity. In this report, we characterize the glycoproteins in human plasma recognized by four SLBRs that prefer different α2-3 sialoglycan structures. We found that the SLBRs recognize a surprisingly small subset of plasma proteins that are extensively O-glycosylated. The preferred plasma protein ligands for a sialyl-T antigen-selective SLBR are proteoglycan 4 (lubricin) and inter-alpha-trypsin inhibitor heavy chain H4. Conversely, the preferred ligand for a 3'sialyllactosamine-selective SLBR is glycocalicin (the extracellular portion of platelet GPIbα). All four SLBRs recognize C1 inhibitor but detect distinctly different glycoforms of this key regulator of the complement and kallikrein protease cascades. The four plasma ligands have potential roles in thrombosis and inflammation, and each has been cited as a biomarker for one or more vascular or other diseases. The combined results suggest that the interaction of Siglec-like adhesins with different subsets of plasma glycoproteins could have a significant impact on the propensity of streptococci to establish endocardial infections.


Assuntos
Proteínas de Bactérias/química , Proteínas Sanguíneas/química , Endocardite , Glicoproteínas/química , Lectinas Semelhantes a Imunoglobulina de Ligação ao Ácido Siálico/química , Streptococcus gordonii/química , Streptococcus sanguis/química , Proteínas de Bactérias/metabolismo , Proteínas Sanguíneas/metabolismo , Glicoproteínas/metabolismo , Humanos , Lectinas Semelhantes a Imunoglobulina de Ligação ao Ácido Siálico/metabolismo , Streptococcus gordonii/metabolismo , Streptococcus sanguis/metabolismo
7.
Int J Nanomedicine ; 12: 4553-4562, 2017.
Artigo em Inglês | MEDLINE | ID: mdl-28790818

RESUMO

PURPOSE: The interaction of Porphyromonas gingivalis with commensal streptococci promotes P. gingivalis colonization of the oral cavity. We previously showed that a synthetic peptide (BAR) derived from Streptococcus gordonii potently inhibited the formation of P. gingivalis/S. gordonii biofilms (IC50 =1.3 µM) and reduced P. gingivalis virulence in a mouse model of periodontitis. Thus, BAR represents a novel therapeutic to control periodontitis by limiting P. gingivalis colonization of the oral cavity. Here, we sought to develop drug-delivery vehicles for potential use in the oral cavity that comprise BAR-modified poly(lactic-co-glycolic)acid (PLGA) nanoparticles (NPs). METHODS: PLGA-NPs were initially modified with palmitylated avidin and subsequently conjugated with biotinylated BAR. The extent of BAR modification was quantified using a fluorescent-labeled peptide. Inhibition of P. gingivalis adherence to S. gordonii by BAR-modified NPs was compared with free peptide using a two-species biofilm model. RESULTS: BAR-modified NPs exhibited an average size of 99±29 nm and a more positive surface charge than unmodified NPs (zeta potentials of -7 mV and -25 mV, respectively). Binding saturation occurred when 37 nmol BAR/mg of avidin-NPs was used, which resulted in a payload of 7.42 nmol BAR/mg NPs. BAR-modified NPs bound to P. gingivalis in a dose-dependent manner and more potently inhibited P. gingivalis/S. gordonii adherence and biofilm formation relative to an equimolar amount of free peptide (IC50 of 0.2 µM versus 1.3 µM). BAR-modified NPs also disrupted the preformed P. gingivalis/S. gordonii biofilms more effectively than free peptide. Finally, we demonstrate that BAR-modified NPs promoted multivalent association with P. gingivalis, providing an explanation for the increased effectiveness of NPs. CONCLUSION: These results indicate that BAR-modified NPs deliver a higher local dose of peptide and may represent a more effective therapeutic approach to limit P. gingivalis colonization of the oral cavity compared to treatment with formulations of free peptide.


Assuntos
Antibacterianos/farmacologia , Nanopartículas/química , Peptídeos/farmacologia , Porphyromonas gingivalis/efeitos dos fármacos , Streptococcus gordonii/química , Antibacterianos/administração & dosagem , Antibacterianos/química , Aderência Bacteriana/efeitos dos fármacos , Proteínas de Bactérias/química , Biofilmes/efeitos dos fármacos , Sistemas de Liberação de Medicamentos/métodos , Ácido Láctico/química , Nanopartículas/administração & dosagem , Peptídeos/química , Ácido Poliglicólico/química , Copolímero de Ácido Poliláctico e Ácido Poliglicólico , Porphyromonas gingivalis/fisiologia , Streptococcus gordonii/efeitos dos fármacos
8.
Anal Chem ; 89(14): 7709-7718, 2017 07 18.
Artigo em Inglês | MEDLINE | ID: mdl-28613833

RESUMO

Hydrogen peroxide (H2O2) is a highly relevant metabolite in many biological processes, including the oral microbiome. To study this metabolite, we developed a 25 µm diameter, highly sensitive, nonenzymatic H2O2 sensor with a detection limit of 250 nM and a broad linear range of 250 nM to 7 mM. The sensor used the synergistic activity of the catalytically active Pt nanoparticles on a high surface area multiwalled carbon nanotube and conducting ionic liquid matrix to achieve high sensitivity (2.4 ± 0.24 mA cm-2 mM-1) for H2O2 oxidation. The unique composite allowed us to miniaturize the sensor and couple it with a Pt electrode (25 µm diameter each) for use as a dual scanning electrochemical microscopy probe. We could detect 65 ± 10 µM H2O2 produced by Streptococcus gordonii (Sg) in a simulated biofilm at 50 µm above its surface in the presence of 1 mM glucose and artificial saliva solution (pH 7.2 at 37 °C). Because of its high stability and low detection limit, the sensor showed a promising chemical image of H2O2 produced by Sg biofilms. We were also able to detect 30 µM H2O2 at 50 µm above the biofilm in the presence of the H2O2-decomposing salivary lactoperoxidase and thiocyanate, which would not otherwise be possible using an existing H2O2 assay. Thus, this sensor can potentially find applications in the study of other important biological processes in a complex matrix where circumstances demand a low detection limit in a compact space.


Assuntos
Técnicas Biossensoriais , Peróxido de Hidrogênio/análise , Líquidos Iônicos/química , Nanotubos de Carbono/química , Platina/química , Streptococcus gordonii/química , Microscopia Eletroquímica de Varredura , Streptococcus gordonii/metabolismo
9.
J Biol Chem ; 292(5): 1538-1549, 2017 02 03.
Artigo em Inglês | MEDLINE | ID: mdl-27920201

RESUMO

Adherence of bacteria to biotic or abiotic surfaces is a prerequisite for host colonization and represents an important step in microbial pathogenicity. This attachment is facilitated by bacterial adhesins at the cell surface. Because of their size and often elaborate multidomain architectures, these polypeptides represent challenging targets for detailed structural and functional characterization. The multifunctional fibrillar adhesin CshA, which mediates binding to both host molecules and other microorganisms, is an important determinant of colonization by Streptococcus gordonii, an oral commensal and opportunistic pathogen of animals and humans. CshA binds the high-molecular-weight glycoprotein fibronectin (Fn) via an N-terminal non-repetitive region, and this protein-protein interaction has been proposed to promote S. gordonii colonization at multiple sites within the host. However, the molecular details of how these two proteins interact have yet to be established. Here we present a structural description of the Fn binding N-terminal region of CshA, derived from a combination of X-ray crystallography, small angle X-ray scattering, and complementary biophysical methods. In vitro binding studies support a previously unreported two-state "catch-clamp" mechanism of Fn binding by CshA, in which the disordered N-terminal domain of CshA acts to "catch" Fn, via formation of a rapidly assembled but also readily dissociable pre-complex, enabling its neighboring ligand binding domain to tightly clamp the two polypeptides together. This study presents a new paradigm for target binding by a bacterial adhesin, the identification of which will inform future efforts toward the development of anti-adhesive agents that target S. gordonii and related streptococci.


Assuntos
Adesinas Bacterianas/metabolismo , Proteínas de Bactérias/metabolismo , Fibronectinas/metabolismo , Proteínas de Membrana/metabolismo , Streptococcus gordonii/metabolismo , Adesinas Bacterianas/química , Adesinas Bacterianas/genética , Proteínas de Bactérias/química , Proteínas de Bactérias/genética , Cristalografia por Raios X , Fibronectinas/química , Fibronectinas/genética , Humanos , Proteínas de Membrana/química , Proteínas de Membrana/genética , Ligação Proteica , Domínios Proteicos , Streptococcus gordonii/química , Streptococcus gordonii/genética
10.
J Biol Chem ; 291(41): 21474-21484, 2016 Oct 07.
Artigo em Inglês | MEDLINE | ID: mdl-27551046

RESUMO

The accessory Sec system in Streptococcus gordonii DL1 is a specialized export system that transports a large serine-rich repeat protein, Hsa, to the bacterial surface. The system is composed of core proteins SecA2 and SecY2 and accessory Sec proteins Asp1-Asp5. Similar to canonical SecYEG, SecY2 forms a channel for translocation of the Hsa adhesin across the cytoplasmic membrane. Accessory Sec proteins Asp4 and Asp5 have been suggested to work alongside SecY2 to form the translocon, similar to the associated SecY, SecE, and SecG of the canonical system (SecYEG). To test this theory, S. gordonii secY2, asp4, and asp5 were co-expressed in Escherichia coli The resultant complex was subsequently purified, and its composition was confirmed by mass spectrometry to be SecY2-Asp4-Asp5. Like SecYEG, the non-canonical complex activates the ATPase activity of the SecA motor (SecA2). This study also shows that Asp4 and Asp5 are necessary for optimal adhesion of S. gordonii to glycoproteins gp340 and fibronectin, known Hsa binding partners, as well as for early stage biofilm formation. This work opens new avenues for understanding the structure and function of the accessory Sec system.


Assuntos
Proteínas de Bactérias , Canais de Translocação SEC , Streptococcus gordonii , Proteínas de Bactérias/química , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Proteínas de Ligação ao Cálcio , Proteínas de Ligação a DNA , Humanos , Receptores de Superfície Celular/química , Receptores de Superfície Celular/genética , Receptores de Superfície Celular/metabolismo , Canais de Translocação SEC/química , Canais de Translocação SEC/genética , Canais de Translocação SEC/metabolismo , Streptococcus gordonii/química , Streptococcus gordonii/genética , Streptococcus gordonii/metabolismo , Proteínas Supressoras de Tumor
11.
Mol Microbiol ; 99(2): 236-53, 2016 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-26395460

RESUMO

Recently, we identified a novel disulfide oxidoreductase, SdbA, in the oral bacterium Streptococcus gordonii. Disulfide oxidoreductases form disulfide bonds in nascent proteins using a CXXC catalytic motif. Typically, the N-terminal cysteine interacts with substrates, whereas the C-terminal cysteine is buried and only reacts with the first cysteine of the motif. In this study, we investigated the SdbA C(86) P(87) D(88) C(89) catalytic motif. In vitro, SdbA single cysteine variants at the N or C-terminal position (SdbAC86P and SdbAC89A ) were active but displayed different susceptibility to oxidation, and N-terminal cysteine was prone to sulfenylation. In S. gordonii, mutants with a single N-terminal cysteine were inactive and formed unstable disulfide adducts with other proteins. Activity was partially restored by inactivation of pyruvate oxidase, a hydrogen peroxide generator. Presence of the C-terminal cysteine alone (in the SdbAC86P variant) could complement the ΔsdbA mutant and restore disulfide bond formation in recombinant and natural protein substrates. These results provide evidence that certain disulfide oxidoreductases can catalyze disulfide bond formation using a single cysteine of the CXXC motif, including the buried C-terminal cysteine.


Assuntos
Proteínas de Bactérias/metabolismo , Cisteína/metabolismo , Dissulfetos/metabolismo , Oxirredutases/metabolismo , Streptococcus gordonii/enzimologia , Motivos de Aminoácidos , Sequência de Aminoácidos , Proteínas de Bactérias/química , Proteínas de Bactérias/genética , Biocatálise , Domínio Catalítico , Cisteína/química , Cisteína/genética , Dissulfetos/química , Oxirredutases/química , Oxirredutases/genética , Estrutura Terciária de Proteína , Streptococcus gordonii/química , Streptococcus gordonii/genética
12.
PLoS One ; 8(5): e63768, 2013.
Artigo em Inglês | MEDLINE | ID: mdl-23691093

RESUMO

The commensal Streptococcus gordonii expresses numerous surface adhesins with which it interacts with other microorganisms, host cells and salivary proteins to initiate dental plaque formation. However, this Gram-positive bacterium can also spread to non-oral sites such as the heart valves and cause infective endocarditis. One of its surface adhesins, Sgo0707, is a large protein composed of a non-repetitive N-terminal region followed by several C-terminal repeat domains and a cell wall sorting motif. Here we present the crystal structure of the Sgo0707 N-terminal domains, refined to 2.1 Å resolution. The model consists of two domains, N1 and N2. The largest domain, N1, comprises a putative binding cleft with a single cysteine located in its centre and exhibits an unexpected structural similarity to the variable domains of the streptococcal Antigen I/II adhesins. The N2-domain has an IgG-like fold commonly found among Gram-positive surface adhesins. Binding studies performed on S. gordonii wild-type and a Sgo0707 deficient mutant show that the Sgo0707 adhesin is involved in binding to type-1 collagen and to oral keratinocytes.


Assuntos
Adesinas Bacterianas/química , Modelos Moleculares , Conformação Proteica , Streptococcus gordonii/química , Adesinas Bacterianas/metabolismo , Parede Celular/química , Clonagem Molecular , Colágeno Tipo I/metabolismo , Cristalografia por Raios X , Ligação Proteica
13.
J Endod ; 39(3): 370-4, 2013 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-23402509

RESUMO

INTRODUCTION: Previous studies have indicated that the antimicrobial efficacy of endodontic irrigants may be diminished in the presence of patient tissues and fluids. With Streptococcus gordonii as a model microorganism, we used a genetic approach to investigate the hypothesis that bacterial surface proteins with collagen-binding abilities may function to protect biofilm cells from antiseptics commonly used in root canal treatment. METHODS: S. gordonii strain DL1 or isogenic mutant strains with deletions of genes encoding collagen-binding surface proteins were grown in microtiter plates to form 8-hour biofilms. Planktonic cells were aspirated, and the remaining biofilm cells were buffer-washed and then incubated with either pH-adjusted buffer or potentially protective solutions of type I collagen, serum, or saliva. Biofilms were rewashed, pulsed with sodium hypochlorite, chlorhexidine digluconate, or BioPure MTAD, and then rewashed. Fresh medium was added, and survivor cell growth was monitored for 24 hours. RESULTS: Buffer-treated biofilm cells of all 3 strains were similarly killed by sodium hypochlorite, chlorhexidine digluconate, and MTAD. Collagen, serum, and saliva significantly protected strain DL1 from all 3 antiseptics compared with buffer-treated cells (P ≤ .0004). However, preincubation with collagen, serum, or saliva left both mutant strain biofilms significantly more susceptible to all 3 antiseptics than were respectively treated strain DL1 biofilms (P ≤ .005). CONCLUSIONS: Interactions of S. gordonii surface proteins with collagen or similar components in serum and saliva may play roles in protecting biofilm cells from endodontic antiseptics. Elucidating molecular mechanisms underlying bacterial resistance to antimicrobials may facilitate the development of more effective treatments.


Assuntos
Anti-Infecciosos Locais/farmacologia , Proteínas da Membrana Bacteriana Externa/metabolismo , Biofilmes/efeitos dos fármacos , Colágeno Tipo I/metabolismo , Resistência Microbiana a Medicamentos/fisiologia , Irrigantes do Canal Radicular/farmacologia , Clorexidina/farmacologia , Ácido Cítrico/farmacologia , Contagem de Colônia Microbiana , Doxiciclina/farmacologia , Humanos , Polissorbatos/farmacologia , Ligação Proteica , Saliva , Hipoclorito de Sódio/farmacologia , Streptococcus gordonii/química , Streptococcus gordonii/efeitos dos fármacos , Streptococcus gordonii/fisiologia
14.
BMC Microbiol ; 12: 211, 2012 Sep 18.
Artigo em Inglês | MEDLINE | ID: mdl-22989070

RESUMO

BACKGROUND: Streptococcus gordonii is one of several species that can initiate the formation of oral biofilms that develop into the complex multispecies microbial communities referred to as dental plaque. It is in the context of dental plaque that periodontal pathogens such as Porphyromonas gingivalis cause disease. We have previously reported a whole cell quantitative proteomics investigation of P. gingivalis in a model dental plaque community of S. gordonii, P. gingivalis, and Fusobacterium nucleatum. Here we report the adaptation of S. gordonii to the same model. RESULTS: 1122 S. gordonii proteins were detected in S. gordonii control samples, 915 in communities with F. nucleatum, 849 with P. gingivalis, and 649 with all three organisms. Quantitative comparisons showed extensive proteome changes in association with F. nucleatum or P. gingivalis individually or both P. gingivalis and F. nucleatum together. The changes were species specific, though the P. gingivalis interaction may be dominant, indicated by large differences between the proteomes with F. nucleatum or P. gingivalis but limited changes between communities with P. gingivalis or both P. gingivalis and F. nucleatum. The results were inspected manually and an ontology analysis conducted using DAVID. Extensive changes were seen in nutrition pathways with increases in energy metabolism and changes in the resulting byproducts, while the acid and sugar repressed PTS (phosphoenolpyruvate dependent phosphotransferase system) sugar transport systems showed decreases. These results were seen across all the multispecies samples, though with different profiles according to the partner species. F. nucleatum association decreased proteins for the metabolic end products acetate and ethanol but increased lactate, the primary source of acidity from streptococcal cultures. P. gingivalis containing samples had a reduction in levels of proteins for ethanol and formate but increased proteins for both acetate and lactate production. The communities also showed increases in exopolysaccharide synthesis, amino acid biosynthesis, and oxidative stress protection and decreases in adhesion and transporter proteins. CONCLUSION: This study showed that S. gordonii demonstrates species specific responses during interactions with F. nucleatum or P. gingivalis. Extensive changes were seen in energy metabolism and byproduct production implicating nutrient transfer as an important community interaction.


Assuntos
Proteínas de Bactérias/análise , Placa Dentária/microbiologia , Ecossistema , Proteoma/análise , Streptococcus gordonii/química , Streptococcus gordonii/crescimento & desenvolvimento , Fusobacterium nucleatum/crescimento & desenvolvimento , Humanos , Interações Microbianas , Modelos Biológicos , Porphyromonas gingivalis/crescimento & desenvolvimento
15.
J Bacteriol ; 194(3): 627-35, 2012 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-22123253

RESUMO

Streptococcus pneumoniae and probably most other members of the genus Streptococcus are competent for natural genetic transformation. During the competent state, S. pneumoniae produces a murein hydrolase, CbpD, that kills and lyses noncompetent pneumococci and closely related species. Previous studies have shown that CbpD is essential for efficient transfer of genomic DNA from noncompetent to competent cells in vitro. Consequently, it has been proposed that CbpD together with the cognate immunity protein ComM constitutes a DNA acquisition mechanism that enables competent pneumococci to capture homologous DNA from closely related streptococci sharing the same habitat. Although genes encoding CbpD homologs or CbpD-related proteins are present in many different streptococcal species, the genomes of a number of streptococci do not encode CbpD-type proteins. In the present study we show that the genomes of nearly all species lacking CbpD encode an unrelated competence-regulated murein hydrolase termed LytF. Using Streptococcus gordonii as a model system, we obtained evidence indicating that LytF is a functional analogue of CbpD. In sum, our results show that a murein hydrolase gene is part of the competence regulon of most or all streptococcal species, demonstrating that these muralytic enzymes constitute an essential part of the streptococcal natural transformation system.


Assuntos
Proteínas de Bactérias/genética , N-Acetil-Muramil-L-Alanina Amidase/genética , Streptococcus gordonii/enzimologia , Streptococcus gordonii/genética , Transformação Bacteriana , Proteínas de Bactérias/química , Proteínas de Bactérias/metabolismo , N-Acetil-Muramil-L-Alanina Amidase/química , N-Acetil-Muramil-L-Alanina Amidase/metabolismo , Estrutura Terciária de Proteína , Regulon , Streptococcus/química , Streptococcus/enzimologia , Streptococcus/genética , Streptococcus gordonii/química
16.
Acta Crystallogr Sect F Struct Biol Cryst Commun ; 66(Pt 11): 1503-7, 2010 Nov 01.
Artigo em Inglês | MEDLINE | ID: mdl-21045307

RESUMO

The carbohydrate-binding region of the bacterial adhesin GspB from Streptococcus gordonii strain M99 (GspB(BR)) was expressed in Escherichia coli and purified using affinity and size-exclusion chromatography. Separate sparse-matrix screening of GspB(BR) buffered in either 20 mM Tris pH 7.4 or 20 mM HEPES pH 7.5 resulted in different crystallographic behavior such that different precipitants, salts and additives supported crystallization of GspB(BR) in each buffer. While both sets of conditions supported crystal growth in space group P2(1)2(1)2(1), the crystals had distinct unit-cell parameters of a = 33.3, b = 86.7, c = 117.9 Šfor crystal form 1 and a = 34.6, b = 98.3, c = 99.0 Šfor crystal form 2. Additive screening improved the crystals grown in both conditions such that diffraction extended to beyond 2 Šresolution. A complete data set has been collected to 1.3 Šresolution with an overall R(merge) value of 0.04 and an R(merge) value of 0.33 in the highest resolution shell.


Assuntos
Adesinas Bacterianas/química , Streptococcus gordonii/química , Adesinas Bacterianas/isolamento & purificação , Cristalização , Cristalografia por Raios X
17.
J Mol Biol ; 397(3): 740-51, 2010 Apr 02.
Artigo em Inglês | MEDLINE | ID: mdl-20138058

RESUMO

Streptococcus gordonii is a primary colonizer and is involved in the formation of dental plaque. This bacterium expresses several surface proteins. One of them is the adhesin SspB, which is a member of the Antigen I/II family of proteins. SspB is a large multi-domain protein that has interactions with surface molecules on other bacteria and on host cells, and is thus a key factor in the formation of biofilms. Here, we report the crystal structure of a truncated form of the SspB C-terminal domain, solved by single-wavelength anomalous dispersion to 1.5 A resolution. The structure represents the first of a C-terminal domain from a streptococcal Antigen I/II protein and is comprised of two structurally related beta-sandwich domains, C2 and C3, both with a Ca(2+) bound in equivalent positions. In each of the domains, a covalent isopeptide bond is observed between a lysine and an asparagine, a feature that is believed to be a common stabilization mechanism in Gram-positive surface proteins. S. gordonii biofilms contain attachment sites for the periodontal pathogen Porphyromonas gingivalis and the SspB C-terminal domain has been shown to have one such recognition motif, the SspB adherence region. The motif protrudes from the protein, and serves as a handle for attachment. The structure suggests several additional putative binding surfaces, and other binding clefts may be created when the full-length protein is folded.


Assuntos
Adesinas Bacterianas/química , Fragmentos de Peptídeos/química , Streptococcus gordonii/química , Sequência de Aminoácidos , Cálcio/metabolismo , Cristalografia por Raios X , Dados de Sequência Molecular , Mutagênese Sítio-Dirigida , Mutação/genética , Conformação Proteica , Estrutura Terciária de Proteína , Homologia de Sequência de Aminoácidos
18.
Protein Sci ; 18(9): 1896-905, 2009 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-19609934

RESUMO

The Antigen I/II (AgI/II) family of proteins are cell wall anchored adhesins expressed on the surface of oral streptococci. The AgI/II proteins interact with molecules on other bacteria, on the surface of host cells, and with salivary proteins. Streptococcus gordonii is a commensal bacterium, and one of the primary colonizers that initiate the formation of the oral biofilm. S. gordonii expresses two AgI/II proteins, SspA and SspB that are closely related. One of the domains of SspB, called the variable (V-) domain, is significantly different from corresponding domains in SspA and all other AgI/II proteins. As a first step to elucidate the differences among these proteins, we have determined the crystal structure of the V-domain from S. gordonii SspB at 2.3 A resolution. The domain comprises a beta-supersandwich with a putative binding cleft stabilized by a metal ion. The overall structure of the SspB V-domain is similar to the previously reported V-domain of the Streptococcus mutans protein SpaP, despite their low sequence similarity. In spite of the conserved architecture of the binding cleft, the cavity is significantly smaller in SspB, which may provide clues about the difference in ligand specificity. We also verified that the metal in the binding cleft is a calcium ion, in concurrence with previous biological data. It was previously suggested that AgI/II V-domains are carbohydrate binding. However, we tested that hypothesis by screening the SspB V-domain for binding to over 400 glycoconjucates and found that the domain does not interact with any of the carbohydrates.


Assuntos
Adesinas Bacterianas/química , Cristalografia por Raios X , Streptococcus gordonii/química , Adesinas Bacterianas/metabolismo , Sequência de Aminoácidos , Sítios de Ligação , Cálcio/metabolismo , Metabolismo dos Carboidratos , Modelos Moleculares , Dados de Sequência Molecular , Ligação Proteica , Estrutura Terciária de Proteína , Alinhamento de Sequência , Streptococcus mutans/química
19.
Artigo em Inglês | MEDLINE | ID: mdl-19574647

RESUMO

SspB is a 1500-residue adhesin expressed on the surface of the oral bacterium Streptococcus gordonii. Its interaction with other bacteria and host cells initiates the development of dental plaque. The full-length C-terminal domain of SspB was cloned, overexpressed in Escherichia coli and purified. However, the protein could not be crystallized. Limited proteolysis of the full-length C-domain identified a core fragment. The proteolysis product was cloned, expressed and purified. The protein was crystallized using the hanging-drop vapour-diffusion method. X-ray data were collected and processed to a maximum resolution of 2.1 A with 96.4% completeness. The crystals belonged to space group P2(1), with one molecule in the asymmetric unit, a solvent content of 33.7% and a corresponding Matthews coefficient of 1.85 A(3) Da(-1).


Assuntos
Adesinas Bacterianas/química , Antígenos de Bactérias/química , Processamento de Proteína Pós-Traducional , Streptococcus gordonii/química , Cristalização , Cristalografia por Raios X , Proteínas Mutantes/química , Estrutura Terciária de Proteína
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