Evaluation of imputation accuracy using the combination of two high-density panels in Nelore beef cattle.
Bernardes, Priscila Arrigucci; Nascimento, Guilherme Batista do; Savegnago, Rodrigo Pelicioni; Buzanskas, Marcos Eli; Watanabe, Rafael Nakamura; de Almeida Regitano, Luciana Correia; Coutinho, Luiz Lehmann; Gondro, Cedric; Munari, Danísio Prado.
; 9(1): 17920, 2019 11 29.
Artigo em Inglês | MEDLINE | ID: mdl-31784673
Genotype imputation in a tropical crossbred dairy cattle population.
The feasibility of using low-density marker panels for genotype imputation and genomic prediction of crossbred dairy cattle of East Africa.
A multi-breed reference panel and additional rare variants maximize imputation accuracy in cattle.
Short communication: The combined use of linkage disequilibrium-based haploblocks and allele frequency-based haplotype selection methods enhances genomic evaluation accuracy in dairy cattle.
Estimation of intrachromosomal inbreeding depression on female fertility using runs of homozygosity in Finnish Ayrshire cattle.
Low levels of taurine introgression in the current Brazilian Nelore and Gir indicine cattle populations.
Fixed-length haplotypes can improve genomic prediction accuracy in an admixed dairy cattle population.
Identification of selective sweeps reveals divergent selection between Chinese Holstein and Simmental cattle populations.
The pattern of linkage disequilibrium in German Holstein cattle.
Strategies for single nucleotide polymorphism (SNP) genotyping to enhance genotype imputation in Gyr (Bos indicus) dairy cattle: Comparison of commercially available SNP chips.