Localisation of the genomic sequence interval for the blue eggshell gene using an F2 resource population of Dongxiang chickens.

ABSTRACT

1. In order to identify the molecular interval containing the blue shell gene (O locus), linkage analysis was conducted with three microsatellite markers, (TTA)(n), (TG)(n) and (tg)(n), and a SNP in intron 1 of SLCO1C1 (solute carrier organic anion transporter family, member 1C1; A locus) to map the O locus in an F2 resource population of Dongxiang chickens. 2. Linkage analysis based on 98 F2 hens resulted in estimation of the best map order of the O locus with other linked markers as (TTA)(n)-(TG)(n)-A-O-(tg)(n). 3. Based on these results, we inferred that the O locus was located between the A and (tg)(n) loci, that is, Chr167,296,991-69,140,571, which is the first genomic sequence interval to be established for the blue eggshell gene.