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Identification of metabolites from 2D (1)H-(13)C HSQC NMR using peak correlation plots.
Öman, Tommy; Tessem, May-Britt; Bathen, Tone F; Bertilsson, Helena; Angelsen, Anders; Hedenström, Mattias; Andreassen, Trygve.
Afiliação
  • Öman T; Department of Chemistry, Umeå University, Umeå, Sweden. tommy.oman@ltu.se.
  • Tessem MB; MI Lab, Department of Circulation and Medical Imaging, Norwegian University of Science and Technology (NTNU), Trondheim, Norway. may-britt.tessem@ntnu.no.
  • Bathen TF; St. Olavs Hospital, Trondheim University Hospital, Trondheim, Norway. may-britt.tessem@ntnu.no.
  • Bertilsson H; MI Lab, Department of Circulation and Medical Imaging, Norwegian University of Science and Technology (NTNU), Trondheim, Norway. tone.f.bathen@ntnu.no.
  • Angelsen A; St. Olavs Hospital, Trondheim University Hospital, Trondheim, Norway. tone.f.bathen@ntnu.no.
  • Hedenström M; Department of Urology, St. Olavs Hospital, Trondheim University Hospital, Trondheim, Norway. helena.bertilsson@ntnu.no.
  • Andreassen T; Department of Cancer Research and Molecular Medicine, NTNU, Trondheim, Norway. helena.bertilsson@ntnu.no.
BMC Bioinformatics ; 15: 413, 2014 Dec 16.
Article em En | MEDLINE | ID: mdl-25511422
ABSTRACT

BACKGROUND:

Identification of individual components in complex mixtures is an important and sometimes daunting task in several research areas like metabolomics and natural product studies. NMR spectroscopy is an excellent technique for analysis of mixtures of organic compounds and gives a detailed chemical fingerprint of most individual components above the detection limit. For the identification of individual metabolites in metabolomics, correlation or covariance between peaks in (1)H NMR spectra has previously been successfully employed. Similar correlation of 2D (1)H-(13)C Heteronuclear Single Quantum Correlation spectra was recently applied to investigate the structure of heparine. In this paper, we demonstrate how a similar approach can be used to identify metabolites in human biofluids (post-prostatic palpation urine).

RESULTS:

From 50 (1)H-(13)C Heteronuclear Single Quantum Correlation spectra, 23 correlation plots resembling pure metabolites were constructed. The identities of these metabolites were confirmed by comparing the correlation plots with reported NMR data, mostly from the Human Metabolome Database.

CONCLUSIONS:

Correlation plots prepared by statistically correlating (1)H-(13)C Heteronuclear Single Quantum Correlation spectra from human biofluids provide unambiguous identification of metabolites. The correlation plots highlight cross-peaks belonging to each individual compound, not limited by long-range magnetization transfer as conventional NMR experiments.
Assuntos

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Próstata / Isótopos de Carbono / Espectroscopia de Ressonância Magnética / Urinálise / Metabolômica / Bases de Dados de Compostos Químicos Idioma: En Ano de publicação: 2014 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Próstata / Isótopos de Carbono / Espectroscopia de Ressonância Magnética / Urinálise / Metabolômica / Bases de Dados de Compostos Químicos Idioma: En Ano de publicação: 2014 Tipo de documento: Article