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A continuum of admixture in the Western Hemisphere revealed by the African Diaspora genome.
Mathias, Rasika Ann; Taub, Margaret A; Gignoux, Christopher R; Fu, Wenqing; Musharoff, Shaila; O'Connor, Timothy D; Vergara, Candelaria; Torgerson, Dara G; Pino-Yanes, Maria; Shringarpure, Suyash S; Huang, Lili; Rafaels, Nicholas; Boorgula, Meher Preethi; Johnston, Henry Richard; Ortega, Victor E; Levin, Albert M; Song, Wei; Torres, Raul; Padhukasahasram, Badri; Eng, Celeste; Mejia-Mejia, Delmy-Aracely; Ferguson, Trevor; Qin, Zhaohui S; Scott, Alan F; Yazdanbakhsh, Maria; Wilson, James G; Marrugo, Javier; Lange, Leslie A; Kumar, Rajesh; Avila, Pedro C; Williams, L Keoki; Watson, Harold; Ware, Lorraine B; Olopade, Christopher; Olopade, Olufunmilayo; Oliveira, Ricardo; Ober, Carole; Nicolae, Dan L; Meyers, Deborah; Mayorga, Alvaro; Knight-Madden, Jennifer; Hartert, Tina; Hansel, Nadia N; Foreman, Marilyn G; Ford, Jean G; Faruque, Mezbah U; Dunston, Georgia M; Caraballo, Luis; Burchard, Esteban G; Bleecker, Eugene.
Afiliação
  • Mathias RA; Department of Medicine, Johns Hopkins University, Baltimore, Maryland 21224, USA.
  • Taub MA; Department of Epidemiology, Bloomberg School of Public Health, JHU, Baltimore, Maryland 21205, USA.
  • Gignoux CR; Department of Biostatistics, Bloomberg School of Public Health, JHU, Baltimore, Maryland 21205, USA.
  • Fu W; Department of Genetics, Stanford University School of Medicine, Stanford, California 94305, USA.
  • Musharoff S; Department of Genomic Sciences, University of Washington, Seattle, Washington 98195, USA.
  • O'Connor TD; Department of Genetics, Stanford University School of Medicine, Stanford, California 94305, USA.
  • Vergara C; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland 21201, USA.
  • Torgerson DG; Program in Personalized and Genomic Medicine, University of Maryland School of Medicine, Baltimore, Maryland 21201, USA.
  • Pino-Yanes M; Department of Medicine, University of Maryland School of Medicine, Baltimore, Maryland 21201, USA.
  • Shringarpure SS; Department of Medicine, Johns Hopkins University, Baltimore, Maryland 21224, USA.
  • Huang L; Department of Medicine, University of California, San Francisco, San Francisco, California 94143, USA.
  • Rafaels N; Department of Medicine, University of California, San Francisco, San Francisco, California 94143, USA.
  • Boorgula MP; CIBER de Enfermedades Respiratorias, Instituto de Salud Carlos III, Madrid 28029, Spain.
  • Johnston HR; Department of Genetics, Stanford University School of Medicine, Stanford, California 94305, USA.
  • Ortega VE; Department of Medicine, Johns Hopkins University, Baltimore, Maryland 21224, USA.
  • Levin AM; Department of Medicine, Johns Hopkins University, Baltimore, Maryland 21224, USA.
  • Song W; Department of Medicine, Johns Hopkins University, Baltimore, Maryland 21224, USA.
  • Torres R; Department of Biostatistics and Bioinformatics, Emory University, Atlanta, Georgia 30322, USA.
  • Padhukasahasram B; Center for Human Genomics and Personalized Medicine, Wake Forest School of Medicine, Winston-Salem, North Carolina 27157, USA.
  • Eng C; Department of Public Health Sciences, Henry Ford Health System, Detroit, Michigan 48202, USA.
  • Mejia-Mejia DA; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland 21201, USA.
  • Ferguson T; Program in Personalized and Genomic Medicine, University of Maryland School of Medicine, Baltimore, Maryland 21201, USA.
  • Qin ZS; Department of Medicine, University of Maryland School of Medicine, Baltimore, Maryland 21201, USA.
  • Scott AF; Biomedical Sciences Graduate Program, University of California, San Francisco, San Francisco, California 94158, USA.
  • Yazdanbakhsh M; Center for Health Policy and Health Services Research, Henry Ford Health System, Detroit, Michigan 48202, USA.
  • Wilson JG; Department of Medicine, University of California, San Francisco, San Francisco, California 94143, USA.
  • Marrugo J; Centro de Neumologia y Alergias, San Pedro Sula 21102, Honduras.
  • Lange LA; Faculty of Medicine, Centro Medico de la Familia, San Pedro Sula 21102, Honduras.
  • Kumar R; Tropical Medicine Research Institute, The University of the West Indies, St. Michael BB11115, Barbados.
  • Avila PC; Department of Biostatistics and Bioinformatics, Emory University, Atlanta, Georgia 30322, USA.
  • Williams LK; Department of Medicine, Johns Hopkins University, Baltimore, Maryland 21224, USA.
  • Watson H; Department of Parasitology, Leiden University Medical Center, Leiden 2333ZA, The Netherlands.
  • Ware LB; Department of Physiology and Biophysics, University of Mississippi Medical Center, Jackson, Mississippi 39216, USA.
  • Olopade C; Instituto de Investigaciones Immunologicas, Universidad de Cartagena, Cartagena 130000, Colombia.
  • Olopade O; Department of Genetics, University of North Carolina, Chapel Hill, North Carolina 27599, USA.
  • Oliveira R; Department of Pediatrics, Northwestern University, Chicago, Illinois 60637, USA.
  • Ober C; The Ann &Robert H. Lurie Children's Hospital of Chicago, Chicago, Illinois 60637, USA.
  • Nicolae DL; Department of Medicine, Northwestern University, Chicago, Illinois 60637, USA.
  • Meyers D; Center for Health Policy and Health Services Research, Henry Ford Health System, Detroit, Michigan 48202, USA.
  • Mayorga A; Department of Internal Medicine, Henry Ford Health System, Detroit, Michigan 48202, USA.
  • Knight-Madden J; Faculty of Medical Sciences Cave Hill Campus, The University of the West Indies, Bridgetown BB11000, Barbados.
  • Hartert T; Queen Elizabeth Hospital, The University of the West Indies, St. Michael BB11115, Barbados.
  • Hansel NN; Department of Medicine, Vanderbilt University, Nashville, Tennessee 37232, USA.
  • Foreman MG; Department of Pathology, Microbiology and Immunology, Vanderbilt University, Nashville, Tennessee 37232, USA.
  • Ford JG; Department of Medicine and Center for Global Health, University of Chicago, Chicago, Illinois 60637, USA.
  • Faruque MU; Department of Medicine, University of Chicago, Chicago, Illinois 60637, USA.
  • Dunston GM; Laboratório de Patologia Experimental, Centro de Pesquisas Gonçalo Moniz, Salvador 40296-710, Brazil.
  • Caraballo L; Department of Human Genetics, University of Chicago, Chicago, Illinois 60637, USA.
  • Burchard EG; Department of Medicine, University of Chicago, Chicago, Illinois 60637, USA.
  • Bleecker E; Department of Statistics, University of Chicago, Chicago, Illinois 60637, USA.
Nat Commun ; 7: 12522, 2016 10 11.
Article em En | MEDLINE | ID: mdl-27725671
ABSTRACT
The African Diaspora in the Western Hemisphere represents one of the largest forced migrations in history and had a profound impact on genetic diversity in modern populations. To date, the fine-scale population structure of descendants of the African Diaspora remains largely uncharacterized. Here we present genetic variation from deeply sequenced genomes of 642 individuals from North and South American, Caribbean and West African populations, substantially increasing the lexicon of human genomic variation and suggesting much variation remains to be discovered in African-admixed populations in the Americas. We summarize genetic variation in these populations, quantifying the postcolonial sex-biased European gene flow across multiple regions. Moreover, we refine estimates on the burden of deleterious variants carried across populations and how this varies with African ancestry. Our data are an important resource for empowering disease mapping studies in African-admixed individuals and will facilitate gene discovery for diseases disproportionately affecting individuals of African ancestry.
Assuntos

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Genoma Humano / População Negra / Fluxo Gênico / Migração Humana Idioma: En Ano de publicação: 2016 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Genoma Humano / População Negra / Fluxo Gênico / Migração Humana Idioma: En Ano de publicação: 2016 Tipo de documento: Article