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Draft genome sequence of the cellulolytic endophyte Chitinophaga costaii A37T2T.
Proença, Diogo N; Whitman, William B; Shapiro, Nicole; Woyke, Tanja; Kyrpides, Nikos C; Morais, Paula V.
Afiliação
  • Proença DN; CEMMPRE, University of Coimbra, 3030-788 Coimbra, Portugal.
  • Whitman WB; Department of Microbiology, 527 Biological Sciences Building, University of Georgia, Athens, GA 30602-2605 USA.
  • Shapiro N; DOE Joint Genome Institute 2800 Mitchell Drive, Walnut Creek, CA 94598 USA.
  • Woyke T; DOE Joint Genome Institute 2800 Mitchell Drive, Walnut Creek, CA 94598 USA.
  • Kyrpides NC; DOE Joint Genome Institute 2800 Mitchell Drive, Walnut Creek, CA 94598 USA.
  • Morais PV; CEMMPRE, University of Coimbra, 3030-788 Coimbra, Portugal.
Stand Genomic Sci ; 12: 53, 2017.
Article em En | MEDLINE | ID: mdl-28904742
Here we report the draft genome sequence of Chitinophaga costai A37T2T (=CIP 110584T, =LMG 27458T), which was isolated from the endophytic community of Pinus pinaster tree. The total genome size of C. costaii A37T2T is 5.07 Mbp, containing 4204 coding sequences. Strain A37T2T encoded multiple genes likely involved in cellulolytic, chitinolytic and lipolytic activities. This genome showed 1145 unique genes assigned into 109 Cluster of Orthologous Groups in comparison with the complete genome of C. pinensis DSM 2588T. The genomic information suggests the potential of the strain A37T2T to interact with the plant metabolism. As there are only a few bacterial genomes related to Pine Wilt Disease, this work provides a contribution to the field.
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Texto completo: 1 Base de dados: MEDLINE Idioma: En Ano de publicação: 2017 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Idioma: En Ano de publicação: 2017 Tipo de documento: Article