STRT-seq-2i: dual-index 5' single cell and nucleus RNA-seq on an addressable microwell array.
Sci Rep
; 7(1): 16327, 2017 11 27.
Article
em En
| MEDLINE
| ID: mdl-29180631
ABSTRACT
Single-cell RNA-seq has become routine for discovering cell types and revealing cellular diversity, but archived human brain samples still pose a challenge to current high-throughput platforms. We present STRT-seq-2i, an addressable 9600-microwell array platform, combining sampling by limiting dilution or FACS, with imaging and high throughput at competitive cost. We applied the platform to fresh single mouse cortical cells and to frozen post-mortem human cortical nuclei, matching the performance of a previous lower-throughput platform while retaining a high degree of flexibility, potentially also for other high-throughput applications.
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Base de dados:
MEDLINE
Assunto principal:
Análise de Sequência de RNA
/
Perfilação da Expressão Gênica
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Análise de Célula Única
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Sequenciamento de Nucleotídeos em Larga Escala
Idioma:
En
Ano de publicação:
2017
Tipo de documento:
Article