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Synchrotron X-Ray Diffraction Dynamic Sampling for Protein Crystal Centering.
Scarborough, Nicole M; Godaliyadda, G M Dilshan P; Ye, Dong Hye; Kissick, David J; Zhang, Shijie; Newman, Justin A; Sheedlo, Michael J; Chowdhury, Azhad; Fischetti, Robert F; Das, Chittaranjan; Buzzard, Gregery T; Bouman, Charles A; Simpson, Garth J.
Afiliação
  • Scarborough NM; Department of Chemistry, Purdue University, West Lafayette, IN, 47907.
  • Godaliyadda GMDP; Department of Electrical and Computer Engineering, Purdue University, West Lafayette, IN, 47907.
  • Ye DH; Department of Electrical and Computer Engineering, Purdue University, West Lafayette, IN, 47907.
  • Kissick DJ; GM/CA@APS, X-ray Science Division, Argonne National Laboratory, Lemont, IL, 60439.
  • Zhang S; Department of Chemistry, Purdue University, West Lafayette, IN, 47907.
  • Newman JA; Department of Chemistry, Purdue University, West Lafayette, IN, 47907.
  • Sheedlo MJ; Department of Chemistry, Purdue University, West Lafayette, IN, 47907.
  • Chowdhury A; Department of Chemistry, Purdue University, West Lafayette, IN, 47907.
  • Fischetti RF; GM/CA@APS, X-ray Science Division, Argonne National Laboratory, Lemont, IL, 60439.
  • Das C; Department of Chemistry, Purdue University, West Lafayette, IN, 47907.
  • Buzzard GT; Department of Mathematics, Purdue University, West Lafayette, IN, 47907.
  • Bouman CA; Department of Electrical and Computer Engineering, Purdue University, West Lafayette, IN, 47907.
  • Simpson GJ; Department of Chemistry, Purdue University, West Lafayette, IN, 47907.
Article em En | MEDLINE | ID: mdl-29527589
ABSTRACT
A supervised learning approach for dynamic sampling (SLADS) was developed to reduce X-ray exposure prior to data collection in protein structure determination. Implementation of this algorithm allowed reduction of the X-ray dose to the central core of the crystal by up to 20-fold compared to current raster scanning approaches. This dose reduction corresponds directly to a reduction on X-ray damage to the protein crystals prior to data collection for structure determination. Implementation at a beamline at Argonne National Laboratory suggests promise for the use of the SLADS approach to aid in the analysis of X-ray labile crystals. The potential benefits match a growing need for improvements in automated approaches for microcrystal positioning.