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Combining Metadynamics and Integrated Tempering Sampling.
Yang, Yi Isaac; Niu, Haiyang; Parrinello, Michele.
Afiliação
  • Yang YI; Department of Chemistry and Applied Biosciences , ETH Zurich , c/o USI Campus, Via Giuseppe Buffi 13 , CH-6900 , Lugano , Ticino , Switzerland.
  • Niu H; Institute of Computational Science , Università della Svizzera italiana (USI) , Via Giuseppe Buffi 13 , CH-6900 , Lugano , Ticino , Switzerland.
  • Parrinello M; Department of Chemistry and Applied Biosciences , ETH Zurich , c/o USI Campus, Via Giuseppe Buffi 13 , CH-6900 , Lugano , Ticino , Switzerland.
J Phys Chem Lett ; 9(22): 6426-6430, 2018 Nov 15.
Article em En | MEDLINE | ID: mdl-30354148
ABSTRACT
The simulation of rare events is one of the key problems in atomistic simulations. Toward its solution, a plethora of methods have been proposed. Here we combine two such

methods:

metadynamics and integrated tempering sampling. In metadynamics, the fluctuations of a carefully chosen collective variable are amplified, while in integrated tempering sampling the system is pushed to visit an approximately uniform interval of energies and allows exploring a range of temperatures in a single run. We describe our approach and apply it to the two prototypical systems a SN2 chemical reaction and to the freezing of silica. The combination of metadynamics and integrated tempering sampling leads to a powerful method. In particular in the case of silica we have measured more than 1 order of magnitude acceleration.

Texto completo: 1 Base de dados: MEDLINE Idioma: En Ano de publicação: 2018 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Idioma: En Ano de publicação: 2018 Tipo de documento: Article