3D based on 2D: Calculating helix angles and stacking patterns using <i>forgi 2.0</i>, an RNA Python library centered on secondary structure elements.

Thiel, Bernhard C; Beckmann, Irene K; Kerpedjiev, Peter; Hofacker, Ivo L

3D based on 2D: Calculating helix angles and stacking patterns using forgi 2.0, an RNA Python library centered on secondary structure elements.

Thiel, Bernhard C; Beckmann, Irene K; Kerpedjiev, Peter; Hofacker, Ivo L.

Afiliação

Thiel BC; Department of Theoretical Chemistry, Faculty of Chemistry, University of Vienna, Vienna, 1090, Austria.
Beckmann IK; Department of Theoretical Chemistry, Faculty of Chemistry, University of Vienna, Vienna, 1090, Austria.
Kerpedjiev P; Department of Biomedical Informatics, Harvard Medical School, Boston, Massachusetts, 02115, USA.
Hofacker IL; Department of Theoretical Chemistry, Faculty of Chemistry, University of Vienna, Vienna, 1090, Austria.

F1000Res ; 82019.

Article em En | MEDLINE | ID: mdl-31069053

Assuntos

Azepinas; Compostos Organometálicos; Modelos Moleculares; Conformação de Ácido Nucleico; RNA

Palavras-chave

Python; RNA; RNA secondary structure; RNA tertiary structure; coaxial stacking; pseudo knots

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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Compostos Organometálicos / Azepinas Idioma: En Ano de publicação: 2019 Tipo de documento: Article

Texto completo

Imprimir

XML

PubMed Links

Buscar no Google

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Compostos Organometálicos / Azepinas Idioma: En Ano de publicação: 2019 Tipo de documento: Article