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Draft genome sequence of Neonectria sp. DH2 isolated from Meconopsis grandis Prain in Tibet.
Lin, Xiaojing; Xu, Hui; Liu, Lan; Li, Huixian; Gao, Zhizeng.
Afiliação
  • Lin X; School of Marine Sciences, Sun Yat-sen University, Guangzhou, 510006 China.
  • Xu H; Research Center of Chinese Herbal Resource Science and Engineering, Guangzhou University of Chinese Medicine, Guangzhou, 510006 China.
  • Liu L; Research Center of Chinese Herbal Resource Science and Engineering, Guangzhou University of Chinese Medicine, Guangzhou, 510006 China.
  • Li H; School of Marine Sciences, Sun Yat-sen University, Guangzhou, 510006 China.
  • Gao Z; Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Zhuhai, 519000 China.
3 Biotech ; 10(8): 346, 2020 Aug.
Article em En | MEDLINE | ID: mdl-32728513
ABSTRACT
In the current study, we report the high-quality draft genome sequence of Neonectria sp. DH2, an endophytic fungus isolated from Meconopsis grandis Prain in Tibet. The whole genome is about 45.8 Mbp, with a GC content of 53%. A total of 14,163 genes are predicted to encode proteins, and 557 of them are considered as unique, as no matches are found in five gene databases. A neighbor-joining phylogenetic tree based on internal transcribed spacer (ITS) region sequences shows that Neonectria sp. DH2 was most closely related to Neonectria ramulariae. 47 biosynthetic gene clusters (BGC) were identified in Neonectria sp. DH2 genome, and only 5 BGCs shows significant similarities to previously reported BGCs. The presence of 42 unique BGCs in Neonectria sp. DH2 suggests that it has great potential to produce novel secondary metabolites.
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Texto completo: 1 Base de dados: MEDLINE Idioma: En Ano de publicação: 2020 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Idioma: En Ano de publicação: 2020 Tipo de documento: Article