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Reconciling Simulations and Experiments With BICePs: A Review.
Voelz, Vincent A; Ge, Yunhui; Raddi, Robert M.
Afiliação
  • Voelz VA; Department of Chemistry, Temple University, Philadelphia, PA, United States.
  • Ge Y; Department of Pharmaceutical Sciences, University of California, Irvine, Irvine, CA, United States.
  • Raddi RM; Department of Chemistry, Temple University, Philadelphia, PA, United States.
Front Mol Biosci ; 8: 661520, 2021.
Article em En | MEDLINE | ID: mdl-34046431
ABSTRACT
Bayesian Inference of Conformational Populations (BICePs) is an algorithm developed to reconcile simulated ensembles with sparse experimental measurements. The Bayesian framework of BICePs enables population reweighting as a post-simulation processing step, with several advantages over existing methods, including the proper use of reference potentials, and the estimation of a Bayes factor-like quantity called the BICePs score for model selection. Here, we summarize the theory underlying this method in context with related algorithms, review the history of BICePs applications to date, and discuss current shortcomings along with future plans for improvement.
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Texto completo: 1 Base de dados: MEDLINE Idioma: En Ano de publicação: 2021 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Idioma: En Ano de publicação: 2021 Tipo de documento: Article