Spliceator: multi-species splice site prediction using convolutional neural networks.

Scalzitti, Nicolas; Kress, Arnaud; Orhand, Romain; Weber, Thomas; Moulinier, Luc; Jeannin-Girardon, Anne; Collet, Pierre; Poch, Olivier; Thompson, Julie D

Scalzitti, Nicolas; Kress, Arnaud; Orhand, Romain; Weber, Thomas; Moulinier, Luc; Jeannin-Girardon, Anne; Collet, Pierre; Poch, Olivier; Thompson, Julie D.

Afiliação

Scalzitti N; Complex Systems and Translational Bioinformatics (CSTB), ICube Laboratory, UMR7357, University of Strasbourg, 1 rue Eugène Boeckel, 67000, Strasbourg, France.
Kress A; Complex Systems and Translational Bioinformatics (CSTB), ICube Laboratory, UMR7357, University of Strasbourg, 1 rue Eugène Boeckel, 67000, Strasbourg, France.
Orhand R; BiGEst-ICube Platform, ICube Laboratory, UMR7357, 1 rue Eugène Boeckel, 67000, Strasbourg, France.
Weber T; Complex Systems and Translational Bioinformatics (CSTB), ICube Laboratory, UMR7357, University of Strasbourg, 1 rue Eugène Boeckel, 67000, Strasbourg, France.
Moulinier L; Complex Systems and Translational Bioinformatics (CSTB), ICube Laboratory, UMR7357, University of Strasbourg, 1 rue Eugène Boeckel, 67000, Strasbourg, France.
Jeannin-Girardon A; Complex Systems and Translational Bioinformatics (CSTB), ICube Laboratory, UMR7357, University of Strasbourg, 1 rue Eugène Boeckel, 67000, Strasbourg, France.
Collet P; BiGEst-ICube Platform, ICube Laboratory, UMR7357, 1 rue Eugène Boeckel, 67000, Strasbourg, France.
Poch O; Complex Systems and Translational Bioinformatics (CSTB), ICube Laboratory, UMR7357, University of Strasbourg, 1 rue Eugène Boeckel, 67000, Strasbourg, France.
Thompson JD; Complex Systems and Translational Bioinformatics (CSTB), ICube Laboratory, UMR7357, University of Strasbourg, 1 rue Eugène Boeckel, 67000, Strasbourg, France.

BMC Bioinformatics ; 22(1): 561, 2021 Nov 23.

Article em En | MEDLINE | ID: mdl-34814826

Assuntos

Algoritmos; Redes Neurais de Computação; Animais; Genoma; Humanos

Palavras-chave

Convolutional neural network; Data quality; Deep learning; Genome annotation; Splice site prediction

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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Algoritmos / Redes Neurais de Computação Idioma: En Ano de publicação: 2021 Tipo de documento: Article

Texto completo

Imprimir

XML

PubMed Links

Buscar no Google

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Algoritmos / Redes Neurais de Computação Idioma: En Ano de publicação: 2021 Tipo de documento: Article