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Inhibitory effect of compounds extracted from Monochoria hastata (L.) Solms on SARS-CoV-2 main protease: An insight from molecular docking and MD-simulation studies.
Baildya, Nabajyoti; Ghosh, Narendra Nath; Chattopadhyay, Asoke P; Mandal, Vivekananda; Majumdar, Sourav; Ansary, Delwar; Sarkar, Md Muttakin.
Afiliação
  • Baildya N; Department of Chemistry, University of Kalyani, Kalyani 741235, India.
  • Ghosh NN; Department of Chemistry, University of Gour Banga, Mokdumpur, Malda 732103, India.
  • Chattopadhyay AP; Department of Chemistry, University of Kalyani, Kalyani 741235, India.
  • Mandal V; Plant and Microbial Physiology and Biochemistry Laboratory, Department of Botany, University of Gour Banga, Mokdumpur, Malda 732103, India.
  • Majumdar S; Department of Chemistry, Kandi Raj College, Kandi, Murshidabad, 742137, India.
  • Ansary D; Department of Chemistry, Dumkal College, Murshidabad, Domkal 742406, India.
  • Sarkar MM; Department of Chemistry, Dumkal College, Murshidabad, Domkal 742406, India.
J Mol Struct ; 1257: 132644, 2022 Jun 05.
Article em En | MEDLINE | ID: mdl-35185220
Using molecular docking and other studies, 20 compounds extracted from Monochoria hastata (L.) Solms were screened, and their inhibitory efficiency examined against main protease (3CLpro) of SARS CoV-2. All the compounds were found to binding with 3CLpro through van der Waals and electrostatic forces of attractions. Among them, Azelaic dihydrazide (ADZ) was found to have the highest docking score. 3CLpro-ADZ complex was studied by MD simulation. ADZ was found to disrupt the structure of 3CLpro after 2 ns. RMSD and RMSF analysis along with sequence and binding energy analysis suggest that ADZ can be a potential drug against SARS CoV-2.
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Texto completo: 1 Base de dados: MEDLINE Idioma: En Ano de publicação: 2022 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Idioma: En Ano de publicação: 2022 Tipo de documento: Article