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A roadmap for the generation of benchmarking resources for antimicrobial resistance detection using next generation sequencing.
Petrillo, Mauro; Fabbri, Marco; Kagkli, Dafni Maria; Querci, Maddalena; Van den Eede, Guy; Alm, Erik; Aytan-Aktug, Derya; Capella-Gutierrez, Salvador; Carrillo, Catherine; Cestaro, Alessandro; Chan, Kok-Gan; Coque, Teresa; Endrullat, Christoph; Gut, Ivo; Hammer, Paul; Kay, Gemma L; Madec, Jean-Yves; Mather, Alison E; McHardy, Alice Carolyn; Naas, Thierry; Paracchini, Valentina; Peter, Silke; Pightling, Arthur; Raffael, Barbara; Rossen, John; Ruppé, Etienne; Schlaberg, Robert; Vanneste, Kevin; Weber, Lukas M; Westh, Henrik; Angers-Loustau, Alexandre.
Afiliação
  • Petrillo M; European Commission Joint Research Centre, Ispra, Italy.
  • Fabbri M; European Commission Joint Research Centre, Ispra, Italy.
  • Kagkli DM; European Commission Joint Research Centre, Ispra, Italy.
  • Querci M; European Commission Joint Research Centre, Ispra, Italy.
  • Van den Eede G; European Commission Joint Research Centre, Ispra, Italy.
  • Alm E; European Commission Joint Research Centre, Geel, Belgium.
  • Aytan-Aktug D; The European Centre for Disease Prevention and Control, Stockholm, Sweden.
  • Capella-Gutierrez S; National Food Institute, Technical University of Denmark, Lyngby, Denmark.
  • Carrillo C; Barcelona Supercomputing Centre (BSC), Barcelona, Spain.
  • Cestaro A; Ottawa Laboratory - Carling, Canadian Food Inspection Agency, Ottawa, Ontario, Canada.
  • Chan KG; Fondazione Edmund Mach, San Michele all'Adige (TN), Italy.
  • Coque T; International Genome Centre, Jiangsu University, Zhenjiang, China.
  • Endrullat C; Division of Genetics and Molecular Biology, Institute of Biological Sciences, Faculty of Science, University of Malaya, Kuala Lumpur, Malaysia.
  • Gut I; Servicio de Microbiología, Hospital Universitario Ramón y Cajal, Instituto Ramón y Cajal de Investigación Sanitaria (IRYCIS), Madrid, Spain.
  • Hammer P; Spanish Consortium for Research on Epidemiology and Public Health (CIBERESP), Carlos III Health Institute, Madrid, Spain.
  • Kay GL; MSD SHARP & DOHME GMBH, Haar, Germany.
  • Madec JY; Centro Nacional de Análisis Genómico, Centre for Genomic Regulation (CNAG-CRG), Barcelona Institute of Technology, Barcelona, Spain.
  • Mather AE; Universitat Pompeu Fabra, Barcelona, Spain.
  • McHardy AC; BIOMES. NGS GmbH c/o Technische Hochschule Wildau, Wildau, Germany.
  • Naas T; Quadram Institute Bioscience, Norwich Research Park, Norwich, UK.
  • Paracchini V; Unité Antibiorésistance et Virulence Bactériennes, ANSES Site de Lyon, Lyon, France.
  • Peter S; Quadram Institute Bioscience, Norwich Research Park, Norwich, UK.
  • Pightling A; University of East Anglia, Norwich, UK.
  • Raffael B; Helmholtz Centre for Infection Research, Braunschweig, Germany.
  • Rossen J; French-NRC for CPEs, Service de Bactériologie-Hygiène, Hôpital de Bicêtre, Le Kremlin-Bicêtre, France.
  • Ruppé E; European Commission Joint Research Centre, Ispra, Italy.
  • Schlaberg R; Institute of Medical Microbiology and Hygiene, University of Tübingen, Tübingen, Germany.
  • Vanneste K; Center for Food Safety and Applied Nutrition, US Food and Drug Administration, College Park, MD, USA.
  • Weber LM; European Commission Joint Research Centre, Ispra, Italy.
  • Westh H; Department of Medical Microbiology, University Medical Center Groningen, University of Groningen, Groningen, The Netherlands.
  • Angers-Loustau A; IAME, Université de Paris, Paris, France.
F1000Res ; 10: 80, 2021.
Article em En | MEDLINE | ID: mdl-35847383
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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Benchmarking / Sequenciamento de Nucleotídeos em Larga Escala Idioma: En Ano de publicação: 2021 Tipo de documento: Article
Texto completo
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XML
PubMed Links
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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Benchmarking / Sequenciamento de Nucleotídeos em Larga Escala Idioma: En Ano de publicação: 2021 Tipo de documento: Article