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Data on the identification of microsatellite markers in Eisenia fetida and Eisenia andrei.
Jaskulak, Marta; Vandenbulcke, Franck; Rorat, Agnieszka; Pauwels, Maxime; Zorena, Kararzyna; Grzmil, Pawel; Plytycz, Barbara.
Afiliação
  • Jaskulak M; Univ. Lille, IMT Lille Douai, Univ. Artois, Yncrea Hauts-de-France, ULR4515 - LGCgE, Laboratoire de Génie Civil et géo-Environnement, Lille F-59000, France.
  • Vandenbulcke F; Department of Immunobiology and Environment Microbiology, Faculty of Health Sciences with Institute of Maritime and Tropical Medicine, Medical University of Gdansk, Gdansk 80-210, Poland.
  • Rorat A; Univ. Lille, IMT Lille Douai, Univ. Artois, Yncrea Hauts-de-France, ULR4515 - LGCgE, Laboratoire de Génie Civil et géo-Environnement, Lille F-59000, France.
  • Pauwels M; Univ. Lille, IMT Lille Douai, Univ. Artois, Yncrea Hauts-de-France, ULR4515 - LGCgE, Laboratoire de Génie Civil et géo-Environnement, Lille F-59000, France.
  • Zorena K; Univ. Lille, IMT Lille Douai, Univ. Artois, Yncrea Hauts-de-France, ULR4515 - LGCgE, Laboratoire de Génie Civil et géo-Environnement, Lille F-59000, France.
  • Grzmil P; Univ. Lille, CNRS, UMR 8198 - EEP - Laboratoire Evolution Ecologie Pale´ontologie, Lille F-59000, France.
  • Plytycz B; Department of Immunobiology and Environment Microbiology, Faculty of Health Sciences with Institute of Maritime and Tropical Medicine, Medical University of Gdansk, Gdansk 80-210, Poland.
Data Brief ; 45: 108612, 2022 Dec.
Article em En | MEDLINE | ID: mdl-36425961
Eisenia fetida and Eisenia andrei are closely related earthworm species that play a crucial part in soil and influence its structure and organic matter cycling. Due to their essential environmental role, they are widely used as model organisms in a vast spectrum of research areas. In this work, we partially sequenced genomes of E. fetida and E. andrei, using Illumina technology (Nano 2 × 250 v2 - MiSeq) and de novo assembly strategy. A total of 3785 and 4258 microsatellite or Simple Sequence Repeat (SSR) markers were identified within E. fetida and E. andrei genomic DNA, respectively. The microsatellite markers will facilitate the analyses of genetic diversity and population genetics studies for the two selected earthworm species and their interspecific hybrids.
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Texto completo: 1 Base de dados: MEDLINE Idioma: En Ano de publicação: 2022 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Idioma: En Ano de publicação: 2022 Tipo de documento: Article