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Convergent evolution and horizontal gene transfer in Arctic Ocean microalgae.
Dorrell, Richard G; Kuo, Alan; Füssy, Zoltan; Richardson, Elisabeth H; Salamov, Asaf; Zarevski, Nikola; Freyria, Nastasia J; Ibarbalz, Federico M; Jenkins, Jerry; Pierella Karlusich, Juan Jose; Stecca Steindorff, Andrei; Edgar, Robyn E; Handley, Lori; Lail, Kathleen; Lipzen, Anna; Lombard, Vincent; McFarlane, John; Nef, Charlotte; Novák Vanclová, Anna Mg; Peng, Yi; Plott, Chris; Potvin, Marianne; Vieira, Fabio Rocha Jimenez; Barry, Kerrie; de Vargas, Colomban; Henrissat, Bernard; Pelletier, Eric; Schmutz, Jeremy; Wincker, Patrick; Dacks, Joel B; Bowler, Chris; Grigoriev, Igor V; Lovejoy, Connie.
Afiliação
  • Dorrell RG; Institut de Biologie de l'ENS, Département de Biologie, École Normale Supérieure, CNRS, INSERM, Université PSL, Paris, France.
  • Kuo A; CNRS Research Federation for the Study of Global Ocean Systems Ecology and Evolution, FR2022/Tara Oceans GOSEE, Paris, France.
  • Füssy Z; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
  • Richardson EH; Department of Parasitology, BIOCEV, Faculty of Science, Charles University, Prague, Czech Republic.
  • Salamov A; Division of Infectious Diseases, Department of Medicine, University of Alberta and Department of Biological Sciences, and University of Alberta, Edmonton, Canada.
  • Zarevski N; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
  • Freyria NJ; Institut de Biologie de l'ENS, Département de Biologie, École Normale Supérieure, CNRS, INSERM, Université PSL, Paris, France.
  • Ibarbalz FM; CNRS Research Federation for the Study of Global Ocean Systems Ecology and Evolution, FR2022/Tara Oceans GOSEE, Paris, France.
  • Jenkins J; Département de Biologie, Institut de Biologie Intégrative des Systèmes, Université Laval, Quebec, Canada.
  • Pierella Karlusich JJ; Institut de Biologie de l'ENS, Département de Biologie, École Normale Supérieure, CNRS, INSERM, Université PSL, Paris, France.
  • Stecca Steindorff A; CNRS Research Federation for the Study of Global Ocean Systems Ecology and Evolution, FR2022/Tara Oceans GOSEE, Paris, France.
  • Edgar RE; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
  • Handley L; HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.
  • Lail K; Institut de Biologie de l'ENS, Département de Biologie, École Normale Supérieure, CNRS, INSERM, Université PSL, Paris, France.
  • Lipzen A; CNRS Research Federation for the Study of Global Ocean Systems Ecology and Evolution, FR2022/Tara Oceans GOSEE, Paris, France.
  • Lombard V; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
  • McFarlane J; Département de Biologie, Institut de Biologie Intégrative des Systèmes, Université Laval, Quebec, Canada.
  • Nef C; HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.
  • Novák Vanclová AM; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
  • Peng Y; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
  • Plott C; Department of Biological Sciences, King Abdulaziz University, Jeddah, Saudi Arabia.
  • Potvin M; Division of Infectious Diseases, Department of Medicine, University of Alberta and Department of Biological Sciences, and University of Alberta, Edmonton, Canada.
  • Vieira FRJ; Institut de Biologie de l'ENS, Département de Biologie, École Normale Supérieure, CNRS, INSERM, Université PSL, Paris, France.
  • Barry K; CNRS Research Federation for the Study of Global Ocean Systems Ecology and Evolution, FR2022/Tara Oceans GOSEE, Paris, France.
  • de Vargas C; Institut de Biologie de l'ENS, Département de Biologie, École Normale Supérieure, CNRS, INSERM, Université PSL, Paris, France.
  • Henrissat B; CNRS Research Federation for the Study of Global Ocean Systems Ecology and Evolution, FR2022/Tara Oceans GOSEE, Paris, France.
  • Pelletier E; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
  • Schmutz J; HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.
  • Wincker P; Département de Biologie, Institut de Biologie Intégrative des Systèmes, Université Laval, Quebec, Canada.
  • Dacks JB; Institut de Biologie de l'ENS, Département de Biologie, École Normale Supérieure, CNRS, INSERM, Université PSL, Paris, France.
  • Bowler C; CNRS Research Federation for the Study of Global Ocean Systems Ecology and Evolution, FR2022/Tara Oceans GOSEE, Paris, France.
  • Grigoriev IV; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
  • Lovejoy C; CNRS Research Federation for the Study of Global Ocean Systems Ecology and Evolution, FR2022/Tara Oceans GOSEE, Paris, France.
Life Sci Alliance ; 6(3)2023 03.
Article em En | MEDLINE | ID: mdl-36522135
ABSTRACT
Microbial communities in the world ocean are affected strongly by oceanic circulation, creating characteristic marine biomes. The high connectivity of most of the ocean makes it difficult to disentangle selective retention of colonizing genotypes (with traits suited to biome specific conditions) from evolutionary selection, which would act on founder genotypes over time. The Arctic Ocean is exceptional with limited exchange with other oceans and ice covered since the last ice age. To test whether Arctic microalgal lineages evolved apart from algae in the global ocean, we sequenced four lineages of microalgae isolated from Arctic waters and sea ice. Here we show convergent evolution and highlight geographically limited HGT as an ecological adaptive force in the form of PFAM complements and horizontal acquisition of key adaptive genes. Notably, ice-binding proteins were acquired and horizontally transferred among Arctic strains. A comparison with Tara Oceans metagenomes and metatranscriptomes confirmed mostly Arctic distributions of these IBPs. The phylogeny of Arctic-specific genes indicated that these events were independent of bacterial-sourced HGTs in Antarctic Southern Ocean microalgae.
Assuntos

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Transferência Genética Horizontal / Microalgas Idioma: En Ano de publicação: 2023 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Transferência Genética Horizontal / Microalgas Idioma: En Ano de publicação: 2023 Tipo de documento: Article