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Artificial-intelligence-based molecular classification of diffuse gliomas using rapid, label-free optical imaging.
Hollon, Todd; Jiang, Cheng; Chowdury, Asadur; Nasir-Moin, Mustafa; Kondepudi, Akhil; Aabedi, Alexander; Adapa, Arjun; Al-Holou, Wajd; Heth, Jason; Sagher, Oren; Lowenstein, Pedro; Castro, Maria; Wadiura, Lisa Irina; Widhalm, Georg; Neuschmelting, Volker; Reinecke, David; von Spreckelsen, Niklas; Berger, Mitchel S; Hervey-Jumper, Shawn L; Golfinos, John G; Snuderl, Matija; Camelo-Piragua, Sandra; Freudiger, Christian; Lee, Honglak; Orringer, Daniel A.
Afiliação
  • Hollon T; Machine Learning in Neurosurgery Laboratory, Department of Neurosurgery, University of Michigan, Ann Arbor, MI, USA. tocho@med.umich.edu.
  • Jiang C; Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI, USA. tocho@med.umich.edu.
  • Chowdury A; Machine Learning in Neurosurgery Laboratory, Department of Neurosurgery, University of Michigan, Ann Arbor, MI, USA.
  • Nasir-Moin M; Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI, USA.
  • Kondepudi A; Machine Learning in Neurosurgery Laboratory, Department of Neurosurgery, University of Michigan, Ann Arbor, MI, USA.
  • Aabedi A; Department of Neurosurgery, New York University, New York, NY, USA.
  • Adapa A; Machine Learning in Neurosurgery Laboratory, Department of Neurosurgery, University of Michigan, Ann Arbor, MI, USA.
  • Al-Holou W; Department of Neurological Surgery, University of California, San Francisco, San Francisco, CA, USA.
  • Heth J; Machine Learning in Neurosurgery Laboratory, Department of Neurosurgery, University of Michigan, Ann Arbor, MI, USA.
  • Sagher O; Department of Neurosurgery, University of Michigan, Ann Arbor, MI, USA.
  • Lowenstein P; Department of Neurosurgery, University of Michigan, Ann Arbor, MI, USA.
  • Castro M; Department of Neurosurgery, University of Michigan, Ann Arbor, MI, USA.
  • Wadiura LI; Department of Neurological Surgery, University of California, San Francisco, San Francisco, CA, USA.
  • Widhalm G; Department of Neurological Surgery, University of California, San Francisco, San Francisco, CA, USA.
  • Neuschmelting V; Department of Neurosurgery, Medical University Vienna, Vienna, Austria.
  • Reinecke D; Department of Neurosurgery, Medical University Vienna, Vienna, Austria.
  • von Spreckelsen N; Department of Neurosurgery, University Hospital Cologne, Cologne, Germany.
  • Berger MS; Department of Neurosurgery, University Hospital Cologne, Cologne, Germany.
  • Hervey-Jumper SL; Department of Neurosurgery, University Hospital Cologne, Cologne, Germany.
  • Golfinos JG; Department of Neurological Surgery, University of California, San Francisco, San Francisco, CA, USA.
  • Snuderl M; Department of Neurological Surgery, University of California, San Francisco, San Francisco, CA, USA.
  • Camelo-Piragua S; Department of Neurosurgery, New York University, New York, NY, USA.
  • Freudiger C; Department of Pathology, New York University, New York, NY, USA.
  • Lee H; Department of Pathology, University of Michigan, Ann Arbor, MI, USA.
  • Orringer DA; Invenio Imaging, Inc., Santa Clara, CA, USA.
Nat Med ; 29(4): 828-832, 2023 04.
Article em En | MEDLINE | ID: mdl-36959422
ABSTRACT
Molecular classification has transformed the management of brain tumors by enabling more accurate prognostication and personalized treatment. However, timely molecular diagnostic testing for patients with brain tumors is limited, complicating surgical and adjuvant treatment and obstructing clinical trial enrollment. In this study, we developed DeepGlioma, a rapid (<90 seconds), artificial-intelligence-based diagnostic screening system to streamline the molecular diagnosis of diffuse gliomas. DeepGlioma is trained using a multimodal dataset that includes stimulated Raman histology (SRH); a rapid, label-free, non-consumptive, optical imaging method; and large-scale, public genomic data. In a prospective, multicenter, international testing cohort of patients with diffuse glioma (n = 153) who underwent real-time SRH imaging, we demonstrate that DeepGlioma can predict the molecular alterations used by the World Health Organization to define the adult-type diffuse glioma taxonomy (IDH mutation, 1p19q co-deletion and ATRX mutation), achieving a mean molecular classification accuracy of 93.3 ± 1.6%. Our results represent how artificial intelligence and optical histology can be used to provide a rapid and scalable adjunct to wet lab methods for the molecular screening of patients with diffuse glioma.
Assuntos

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Neoplasias Encefálicas / Glioma Idioma: En Ano de publicação: 2023 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Neoplasias Encefálicas / Glioma Idioma: En Ano de publicação: 2023 Tipo de documento: Article